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The map label for this gene is 52841223

Identifier: 52841223

GI number: 52841223

Start: 1082487

End: 1085240

Strand: Reverse

Name: 52841223

Synonym: lpg0989

Alternate gene names: NA

Gene position: 1085240-1082487 (Counterclockwise)

Preceding gene: 52841224

Following gene: 52841222

Centisome position: 31.94

GC content: 41.36

Gene sequence:

>2754_bases
ATGATGAAACGATTATCTAACTGGTTGCTTGGGGAAAAGAATCCCCAAGCTATAAAGGAACAAGAGGTAAAAATGCAATA
CGCCAACCCTCTCCCATCTTTTGCCGACAGGCTCGCCATTGTTGATTTTAATGAAAAGGAACAAGTATTTTTATTTGCTG
ATGGAAAAAGTTTAGGTTCAGGGTTTGAGTTAGGCGATATTCAAGCTGAAGCCGCTTCTCCTGAATATCTTCAAGCTGTC
TTTAATAAAATCCGCGATACCTTTGCAACGGTAGTTCCCCTTCATGCCATTGATCCTTGGGTCATGCAGATATTTGTTCA
AGATGAATATAGCCTTGATCCTGTAATCGATCATATTAAAGCCCAGATTCCACAACAACTCATTGAAAGTCCATTAACGC
AAGACTACTTACAACGCCTGCACGATCTCTACAATAAAATGACCAGGCCAGAAGGCTTATTTCTCGATCCTAAAACGGGT
GCGCCCTATCGTGGCCGCAGACGAAGAATCAGAGTATTGTTTTATAGACAACTACATCAAACCACTTTAACTAGAGAACA
GACTCTTCTGGAACATCAAGAAGTCGTCAGCCAGATTGAAACCAAATTGCGCTCACCAGGCCTAGAAATCAAACGTCTTA
AAGGTCAGGATTATTATCAATGGTGGATACGCTGGTTTAATCCCAAATCAGCCGATGAGATCTTGGAACAATATCCCTAC
CCTGACCCCATACCAGCAGGTTTTAATCTGGCGCAAAATATATTCTTTTCCCCGCCTGAGAGCGATGAACAAGGATTTAT
TTTTGAAGGCCGAAAACAAAGAGTTCTGTATGTTGATGGCTTAAAAGAATCGCCTATTATTGGTTTAGTCTCCCGAGAAA
GACAACAAGCCAATCCTAAACACCGCTATGCGCTTTTGGATACCTTGCCAGAAGGAAGCATCTACACCATTCAAGTCGTC
TTTAGCCATGATGAAAGTCTTGATTCCCATTTAACACGATTAGAAAAAGGAATTGTGGGAACCAGTTTAAAACCACAGGA
AGTCCGAGATGATATTAAAACCGCCCGTAATGAGTTAAGTACTGGTAATCGTCTGTTCTGGGTTAATCAGGCCGTTTTTT
ATCAAGCTGAAGATGAACAACAGGCACAAGCCATAGAAAAAAACCTGCATACCATATTCAACGATGCAAAGATGCCCTTA
ATTCATTCCAGCTATGATATCCACCCTTTAAATTCCTGGCTCAATGCCCTGCCATTTAACTTCGATCCCCACTATGCCCG
TAAGTACTTATGCTTTGACCGCCTGATGTATGCCACTGAACTTGCAGCTTTACTTCCAGTCTATGGCCGGAACCAAGGCG
CAAGGCATCTACCCTGTTTTCCTTTTTTCAACCGCTTAGGCGAGCCTGTTTTCTTTGACTTACTTCACCATGATTTTATT
AGCCAAAATTCGCATTGCGCTATCTTCGCTAACTCTGGCGGTGGTAAATCGGTTTTAACAGGCTGGATGATTCAATCACT
CCTCGCCATGAAAAACGCCCGGGTGGTGCTTTTTGAAATGGGGAACTCGTTTGACCGGATGCTCATTCATGCCAAAGCCC
ATGGCAAAAAAACCAAGCAGTTATTATTGAGTAATAAGAAAGAGGAAGCCGTTCCATTAAATCCATTTTGTGAAGCATAT
AAAGCCATTCCAGAAATTACAGATAATTTAAGTGCTGAGCAAGCCTCTTTAATGGCTCAAAAAATCCTGGATCTTAAAGA
TCCTGCAAACTCAGAAGATTTAGCTTGTGGTGATGGTTCTCGCGCATATCTCGCAGAGCTTGCCTTGGCTTTGCGTACCA
TGATTACGGAAGCCAATGCCTTGGAAGAAGAACAATTTACCTTGGCTGATGAAACTCTGCTTATCGAAGTATTAATTGAT
GCCATCCTAACCTCATTTAACAACGGCATTCCACAAATGTTGACTGAGCATATTGTAAGTAGCTTTAAACGACGGTTGGA
TAAAGAAACGGTGACTCGCAAGAAAGACCGAATTCTGGATATGCACGACCGATTAAACAGTTATGTCATTAACAGCGCCA
AATCACGATTTTTTAATGTGCCAACAGAACCTTTAGGTGATTTTGATATCTTTCATATTGATATTTCAGCGATTAAAGAT
GATACAGGAAAGCTGGCTTTGGTTATGGTGTCTTTGTTGCCAAGAATTTTGGCTATGGCAGAAGCCACTCAAAACGACAA
TAGGCCGACCTTTCTTTTTATTGATGAATCCCATCTGCAATTTCAAATTCCCTCTGTGGTGACTGTGTGTCTATTAGTTG
CCAAAGTAGCCAGAAAACTCGGGCTTTGGCTGGTTGCAATTACCCAAAATGTCACCGACATGAATTCTGAAAAGGCTGCA
AAGATTTTATCGTTAATTGAAACCTGGATTTTATTGGGATTGGATGAAAAAGAAATCACTGATGTGAAACGTTTCAAATC
CTTAACACCGCAGCAGGAAACCTTAATCAGAGATATTGATTCACAAAAAGGTTTGTATGCAGAAGCGGTTTTATTAGGGT
CACGCTATCAAGGATTGTTTCGCGTCATTCCACCTCGCTACCTGCTTGCCCTTTTAATGACTGAGAAATCAGAAAAAGCA
CAACGCCACCTCCTGGAGAAAGAACATGATGTCCTTGAAGCAGCTGAAATCATGGCTAAGAAACTCGAGCAACCAAAAAC
GACTACTCATAATAGGGCTTATTTTTATGACTAA

Upstream 100 bases:

>100_bases
ATTGGGCGATGAACAAATCATCAAACCAGCCTACACCACACGCTTTTTTCTTTATAAGCAAAACCAGTATGCCCTGGCAT
CGGAACTGTATTAAGGAGGC

Downstream 100 bases:

>100_bases
TACTGTCTTTGCTTTAGAAAGCACAAGCCCGCCTCATCCAGTGAACACCTTCACAATTGCCACACGGGTTTTGCAAAAGC
TGTTTCAAAACAGCCATTAC

Product: Type IV secretory protein VirB4 components

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 917; Mature: 917

Protein sequence:

>917_residues
MMKRLSNWLLGEKNPQAIKEQEVKMQYANPLPSFADRLAIVDFNEKEQVFLFADGKSLGSGFELGDIQAEAASPEYLQAV
FNKIRDTFATVVPLHAIDPWVMQIFVQDEYSLDPVIDHIKAQIPQQLIESPLTQDYLQRLHDLYNKMTRPEGLFLDPKTG
APYRGRRRRIRVLFYRQLHQTTLTREQTLLEHQEVVSQIETKLRSPGLEIKRLKGQDYYQWWIRWFNPKSADEILEQYPY
PDPIPAGFNLAQNIFFSPPESDEQGFIFEGRKQRVLYVDGLKESPIIGLVSRERQQANPKHRYALLDTLPEGSIYTIQVV
FSHDESLDSHLTRLEKGIVGTSLKPQEVRDDIKTARNELSTGNRLFWVNQAVFYQAEDEQQAQAIEKNLHTIFNDAKMPL
IHSSYDIHPLNSWLNALPFNFDPHYARKYLCFDRLMYATELAALLPVYGRNQGARHLPCFPFFNRLGEPVFFDLLHHDFI
SQNSHCAIFANSGGGKSVLTGWMIQSLLAMKNARVVLFEMGNSFDRMLIHAKAHGKKTKQLLLSNKKEEAVPLNPFCEAY
KAIPEITDNLSAEQASLMAQKILDLKDPANSEDLACGDGSRAYLAELALALRTMITEANALEEEQFTLADETLLIEVLID
AILTSFNNGIPQMLTEHIVSSFKRRLDKETVTRKKDRILDMHDRLNSYVINSAKSRFFNVPTEPLGDFDIFHIDISAIKD
DTGKLALVMVSLLPRILAMAEATQNDNRPTFLFIDESHLQFQIPSVVTVCLLVAKVARKLGLWLVAITQNVTDMNSEKAA
KILSLIETWILLGLDEKEITDVKRFKSLTPQQETLIRDIDSQKGLYAEAVLLGSRYQGLFRVIPPRYLLALLMTEKSEKA
QRHLLEKEHDVLEAAEIMAKKLEQPKTTTHNRAYFYD

Sequences:

>Translated_917_residues
MMKRLSNWLLGEKNPQAIKEQEVKMQYANPLPSFADRLAIVDFNEKEQVFLFADGKSLGSGFELGDIQAEAASPEYLQAV
FNKIRDTFATVVPLHAIDPWVMQIFVQDEYSLDPVIDHIKAQIPQQLIESPLTQDYLQRLHDLYNKMTRPEGLFLDPKTG
APYRGRRRRIRVLFYRQLHQTTLTREQTLLEHQEVVSQIETKLRSPGLEIKRLKGQDYYQWWIRWFNPKSADEILEQYPY
PDPIPAGFNLAQNIFFSPPESDEQGFIFEGRKQRVLYVDGLKESPIIGLVSRERQQANPKHRYALLDTLPEGSIYTIQVV
FSHDESLDSHLTRLEKGIVGTSLKPQEVRDDIKTARNELSTGNRLFWVNQAVFYQAEDEQQAQAIEKNLHTIFNDAKMPL
IHSSYDIHPLNSWLNALPFNFDPHYARKYLCFDRLMYATELAALLPVYGRNQGARHLPCFPFFNRLGEPVFFDLLHHDFI
SQNSHCAIFANSGGGKSVLTGWMIQSLLAMKNARVVLFEMGNSFDRMLIHAKAHGKKTKQLLLSNKKEEAVPLNPFCEAY
KAIPEITDNLSAEQASLMAQKILDLKDPANSEDLACGDGSRAYLAELALALRTMITEANALEEEQFTLADETLLIEVLID
AILTSFNNGIPQMLTEHIVSSFKRRLDKETVTRKKDRILDMHDRLNSYVINSAKSRFFNVPTEPLGDFDIFHIDISAIKD
DTGKLALVMVSLLPRILAMAEATQNDNRPTFLFIDESHLQFQIPSVVTVCLLVAKVARKLGLWLVAITQNVTDMNSEKAA
KILSLIETWILLGLDEKEITDVKRFKSLTPQQETLIRDIDSQKGLYAEAVLLGSRYQGLFRVIPPRYLLALLMTEKSEKA
QRHLLEKEHDVLEAAEIMAKKLEQPKTTTHNRAYFYD
>Mature_917_residues
MMKRLSNWLLGEKNPQAIKEQEVKMQYANPLPSFADRLAIVDFNEKEQVFLFADGKSLGSGFELGDIQAEAASPEYLQAV
FNKIRDTFATVVPLHAIDPWVMQIFVQDEYSLDPVIDHIKAQIPQQLIESPLTQDYLQRLHDLYNKMTRPEGLFLDPKTG
APYRGRRRRIRVLFYRQLHQTTLTREQTLLEHQEVVSQIETKLRSPGLEIKRLKGQDYYQWWIRWFNPKSADEILEQYPY
PDPIPAGFNLAQNIFFSPPESDEQGFIFEGRKQRVLYVDGLKESPIIGLVSRERQQANPKHRYALLDTLPEGSIYTIQVV
FSHDESLDSHLTRLEKGIVGTSLKPQEVRDDIKTARNELSTGNRLFWVNQAVFYQAEDEQQAQAIEKNLHTIFNDAKMPL
IHSSYDIHPLNSWLNALPFNFDPHYARKYLCFDRLMYATELAALLPVYGRNQGARHLPCFPFFNRLGEPVFFDLLHHDFI
SQNSHCAIFANSGGGKSVLTGWMIQSLLAMKNARVVLFEMGNSFDRMLIHAKAHGKKTKQLLLSNKKEEAVPLNPFCEAY
KAIPEITDNLSAEQASLMAQKILDLKDPANSEDLACGDGSRAYLAELALALRTMITEANALEEEQFTLADETLLIEVLID
AILTSFNNGIPQMLTEHIVSSFKRRLDKETVTRKKDRILDMHDRLNSYVINSAKSRFFNVPTEPLGDFDIFHIDISAIKD
DTGKLALVMVSLLPRILAMAEATQNDNRPTFLFIDESHLQFQIPSVVTVCLLVAKVARKLGLWLVAITQNVTDMNSEKAA
KILSLIETWILLGLDEKEITDVKRFKSLTPQQETLIRDIDSQKGLYAEAVLLGSRYQGLFRVIPPRYLLALLMTEKSEKA
QRHLLEKEHDVLEAAEIMAKKLEQPKTTTHNRAYFYD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 104980; Mature: 104980

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKRLSNWLLGEKNPQAIKEQEVKMQYANPLPSFADRLAIVDFNEKEQVFLFADGKSLGS
CCHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHCCEEEEECCCCCEEEEEECCCCCCC
GFELGDIQAEAASPEYLQAVFNKIRDTFATVVPLHAIDPWVMQIFVQDEYSLDPVIDHIK
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHEEECCCCCCCHHHHHHH
AQIPQQLIESPLTQDYLQRLHDLYNKMTRPEGLFLDPKTGAPYRGRRRRIRVLFYRQLHQ
HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHH
TTLTREQTLLEHQEVVSQIETKLRSPGLEIKRLKGQDYYQWWIRWFNPKSADEILEQYPY
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHCCCCCHHHHHHHCCC
PDPIPAGFNLAQNIFFSPPESDEQGFIFEGRKQRVLYVDGLKESPIIGLVSRERQQANPK
CCCCCCCCHHHHHCCCCCCCCCCCCCEEECCCCEEEEECCCCCCCEEEHHHHHHHHCCCH
HRYALLDTLPEGSIYTIQVVFSHDESLDSHLTRLEKGIVGTSLKPQEVRDDIKTARNELS
HHHHHHHCCCCCCEEEEEEEEECCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHC
TGNRLFWVNQAVFYQAEDEQQAQAIEKNLHTIFNDAKMPLIHSSYDIHPLNSWLNALPFN
CCCEEEEEEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHCCCC
FDPHYARKYLCFDRLMYATELAALLPVYGRNQGARHLPCFPFFNRLGEPVFFDLLHHDFI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHH
SQNSHCAIFANSGGGKSVLTGWMIQSLLAMKNARVVLFEMGNSFDRMLIHAKAHGKKTKQ
CCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHEEEHHHCCHHHHH
LLLSNKKEEAVPLNPFCEAYKAIPEITDNLSAEQASLMAQKILDLKDPANSEDLACGDGS
HHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
RAYLAELALALRTMITEANALEEEQFTLADETLLIEVLIDAILTSFNNGIPQMLTEHIVS
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
SFKRRLDKETVTRKKDRILDMHDRLNSYVINSAKSRFFNVPTEPLGDFDIFHIDISAIKD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCEEEEEEEEHHHC
DTGKLALVMVSLLPRILAMAEATQNDNRPTFLFIDESHLQFQIPSVVTVCLLVAKVARKL
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEECHHHHHHHHHHHHHHHHH
GLWLVAITQNVTDMNSEKAAKILSLIETWILLGLDEKEITDVKRFKSLTPQQETLIRDID
CCEEEEEECCHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHH
SQKGLYAEAVLLGSRYQGLFRVIPPRYLLALLMTEKSEKAQRHLLEKEHDVLEAAEIMAK
CCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
KLEQPKTTTHNRAYFYD
HHCCCCCCCCCCEEECC
>Mature Secondary Structure
MMKRLSNWLLGEKNPQAIKEQEVKMQYANPLPSFADRLAIVDFNEKEQVFLFADGKSLGS
CCHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHCCEEEEECCCCCEEEEEECCCCCCC
GFELGDIQAEAASPEYLQAVFNKIRDTFATVVPLHAIDPWVMQIFVQDEYSLDPVIDHIK
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHEEECCCCCCCHHHHHHH
AQIPQQLIESPLTQDYLQRLHDLYNKMTRPEGLFLDPKTGAPYRGRRRRIRVLFYRQLHQ
HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHH
TTLTREQTLLEHQEVVSQIETKLRSPGLEIKRLKGQDYYQWWIRWFNPKSADEILEQYPY
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHCCCCCHHHHHHHCCC
PDPIPAGFNLAQNIFFSPPESDEQGFIFEGRKQRVLYVDGLKESPIIGLVSRERQQANPK
CCCCCCCCHHHHHCCCCCCCCCCCCCEEECCCCEEEEECCCCCCCEEEHHHHHHHHCCCH
HRYALLDTLPEGSIYTIQVVFSHDESLDSHLTRLEKGIVGTSLKPQEVRDDIKTARNELS
HHHHHHHCCCCCCEEEEEEEEECCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHC
TGNRLFWVNQAVFYQAEDEQQAQAIEKNLHTIFNDAKMPLIHSSYDIHPLNSWLNALPFN
CCCEEEEEEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHCCCC
FDPHYARKYLCFDRLMYATELAALLPVYGRNQGARHLPCFPFFNRLGEPVFFDLLHHDFI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHH
SQNSHCAIFANSGGGKSVLTGWMIQSLLAMKNARVVLFEMGNSFDRMLIHAKAHGKKTKQ
CCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHEEEHHHCCHHHHH
LLLSNKKEEAVPLNPFCEAYKAIPEITDNLSAEQASLMAQKILDLKDPANSEDLACGDGS
HHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
RAYLAELALALRTMITEANALEEEQFTLADETLLIEVLIDAILTSFNNGIPQMLTEHIVS
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
SFKRRLDKETVTRKKDRILDMHDRLNSYVINSAKSRFFNVPTEPLGDFDIFHIDISAIKD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCEEEEEEEEHHHC
DTGKLALVMVSLLPRILAMAEATQNDNRPTFLFIDESHLQFQIPSVVTVCLLVAKVARKL
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEECHHHHHHHHHHHHHHHHH
GLWLVAITQNVTDMNSEKAAKILSLIETWILLGLDEKEITDVKRFKSLTPQQETLIRDID
CCEEEEEECCHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHH
SQKGLYAEAVLLGSRYQGLFRVIPPRYLLALLMTEKSEKAQRHLLEKEHDVLEAAEIMAK
CCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
KLEQPKTTTHNRAYFYD
HHCCCCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA