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The map label for this gene is 52841214

Identifier: 52841214

GI number: 52841214

Start: 1072751

End: 1073674

Strand: Reverse

Name: 52841214

Synonym: lpg0980

Alternate gene names: NA

Gene position: 1073674-1072751 (Counterclockwise)

Preceding gene: 52841215

Following gene: 52841212

Centisome position: 31.6

GC content: 38.64

Gene sequence:

>924_bases
GTGATTCTTTATGGAGGTATCTCAATGAGTAAGTCCAAACTTAAAAATGCCCAGTATTCAATCAATGAATGTATTAAGAA
AATCCAAAACTACTCCCATGCCAGTCGAGCAGATATGAAACACATGTTGAATCGCTGCGTCAAAGATCTACACGAACTGG
GCTATATGATAACACACATAAAAGGACTAAAACCAAAACACATATACATCCTGGTTGATCACTGGAAAGCGCAGAATAAA
AATCCCGCAACAATTAAAAATTACATGGCTAAACTGCGAAAAGTAGCCTCAGTGCTAAACAAGCCAGAACTGGTCAAAGA
ATGCAACGACAACTATAAAATCAATAAACGTAATTATGCCCCTCAATATAATAAAGCAATCAATAACGTCGATTTTTCCA
AATGCTCAGACCCAATGATCCGTTTATCCCTGGAAGCCCAATCACTTTTCGGTCTACGCCGTGAAGAATCGATGAAGATT
GTACTCAGTCACGCCTGGCAAGGAAATAAATTGGTTATAAAGCCCAGCTGGACAAAAGGTGGAATCGGGCGTGATATTAA
ACTAACGAATGAGCAACAACGACAGTGGCTACTCAATGCTATAAAACAAGTTCCTGCTGGACAATCCCTCATTCCTAAAG
AAAAGACTTATAAAAATCATCTAGCTCAGTATCATGAAGTGATAGAAAAAATGGGCTTAAGCAAATGCCATGGCCTTCGC
CATGCTTATGCTCAGCGAAGATATCATGAAATTACAAAATCCTATGACAAAACTGGCAATGGACTTATATGCCCAATTCA
AGGAGGCAGAGTATACAAAGAACTGAATCCTCTTGAAAAATATTGGGATAGAACCGCAAGGGAAATTATTAGCCAGTCGC
TTGGGCATTCGAGATTAAGTATTACAAAAATTTACTTAGGCTGA

Upstream 100 bases:

>100_bases
CGCTACCTCTATGCAAAACAAATGTATCAGTATCTTTTGTCCATATTAGGCAAGTACGAAACCTATTGGGTTATTCGAAC
CGAAATGGGCATCAAATCCC

Downstream 100 bases:

>100_bases
CAATCTTTGCTTTTTTAAATCTTCAATACACAATTTCATTTTATAGTGTGGTACTGGATGCCATGAAGCTATAAATTCCC
CAATGATTTCAAAACCAGCT

Product: putative integrase

Products: NA

Alternate protein names: Fis Family Transcriptional Regulator; Poisomerase/Recombinase/Integrase; Integrase Protein; DNA Breaking-Rejoining Protein; Tyrosine Recombinase; Phage Integrase Family Protein

Number of amino acids: Translated: 307; Mature: 307

Protein sequence:

>307_residues
MILYGGISMSKSKLKNAQYSINECIKKIQNYSHASRADMKHMLNRCVKDLHELGYMITHIKGLKPKHIYILVDHWKAQNK
NPATIKNYMAKLRKVASVLNKPELVKECNDNYKINKRNYAPQYNKAINNVDFSKCSDPMIRLSLEAQSLFGLRREESMKI
VLSHAWQGNKLVIKPSWTKGGIGRDIKLTNEQQRQWLLNAIKQVPAGQSLIPKEKTYKNHLAQYHEVIEKMGLSKCHGLR
HAYAQRRYHEITKSYDKTGNGLICPIQGGRVYKELNPLEKYWDRTAREIISQSLGHSRLSITKIYLG

Sequences:

>Translated_307_residues
MILYGGISMSKSKLKNAQYSINECIKKIQNYSHASRADMKHMLNRCVKDLHELGYMITHIKGLKPKHIYILVDHWKAQNK
NPATIKNYMAKLRKVASVLNKPELVKECNDNYKINKRNYAPQYNKAINNVDFSKCSDPMIRLSLEAQSLFGLRREESMKI
VLSHAWQGNKLVIKPSWTKGGIGRDIKLTNEQQRQWLLNAIKQVPAGQSLIPKEKTYKNHLAQYHEVIEKMGLSKCHGLR
HAYAQRRYHEITKSYDKTGNGLICPIQGGRVYKELNPLEKYWDRTAREIISQSLGHSRLSITKIYLG
>Mature_307_residues
MILYGGISMSKSKLKNAQYSINECIKKIQNYSHASRADMKHMLNRCVKDLHELGYMITHIKGLKPKHIYILVDHWKAQNK
NPATIKNYMAKLRKVASVLNKPELVKECNDNYKINKRNYAPQYNKAINNVDFSKCSDPMIRLSLEAQSLFGLRREESMKI
VLSHAWQGNKLVIKPSWTKGGIGRDIKLTNEQQRQWLLNAIKQVPAGQSLIPKEKTYKNHLAQYHEVIEKMGLSKCHGLR
HAYAQRRYHEITKSYDKTGNGLICPIQGGRVYKELNPLEKYWDRTAREIISQSLGHSRLSITKIYLG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35505; Mature: 35505

Theoretical pI: Translated: 10.40; Mature: 10.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILYGGISMSKSKLKNAQYSINECIKKIQNYSHASRADMKHMLNRCVKDLHELGYMITHI
CEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
KGLKPKHIYILVDHWKAQNKNPATIKNYMAKLRKVASVLNKPELVKECNDNYKINKRNYA
CCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCEECCCCCC
PQYNKAINNVDFSKCSDPMIRLSLEAQSLFGLRREESMKIVLSHAWQGNKLVIKPSWTKG
CHHHHHHCCCCHHHCCCCEEEEEECHHHHHCCCHHHHHHHHHEECCCCCEEEEECCCCCC
GIGRDIKLTNEQQRQWLLNAIKQVPAGQSLIPKEKTYKNHLAQYHEVIEKMGLSKCHGLR
CCCCCEEECCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHH
HAYAQRRYHEITKSYDKTGNGLICPIQGGRVYKELNPLEKYWDRTAREIISQSLGHSRLS
HHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEE
ITKIYLG
EEEEECC
>Mature Secondary Structure
MILYGGISMSKSKLKNAQYSINECIKKIQNYSHASRADMKHMLNRCVKDLHELGYMITHI
CEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
KGLKPKHIYILVDHWKAQNKNPATIKNYMAKLRKVASVLNKPELVKECNDNYKINKRNYA
CCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCEECCCCCC
PQYNKAINNVDFSKCSDPMIRLSLEAQSLFGLRREESMKIVLSHAWQGNKLVIKPSWTKG
CHHHHHHCCCCHHHCCCCEEEEEECHHHHHCCCHHHHHHHHHEECCCCCEEEEECCCCCC
GIGRDIKLTNEQQRQWLLNAIKQVPAGQSLIPKEKTYKNHLAQYHEVIEKMGLSKCHGLR
CCCCCEEECCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHH
HAYAQRRYHEITKSYDKTGNGLICPIQGGRVYKELNPLEKYWDRTAREIISQSLGHSRLS
HHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEE
ITKIYLG
EEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA