Click here to switch to the map view.

The map label for this gene is 52841198

Identifier: 52841198

GI number: 52841198

Start: 1054066

End: 1055307

Strand: Reverse

Name: 52841198

Synonym: lpg0963

Alternate gene names: NA

Gene position: 1055307-1054066 (Counterclockwise)

Preceding gene: 52841202

Following gene: 52841192

Centisome position: 31.06

GC content: 40.66

Gene sequence:

>1242_bases
ATGCGCTATATACTGCCAGCAGGAGCTCTAACCAGCCTTAACTTTTTACGCGATGACTATCAATCAGAAAGAAAAGTGGA
TTTGGATCAACCTCCATCTTTAATCGGAGTACCTACTCTTTTTGGAGGCACTGATGTCATAGCCAGAGATAAACAAACCA
AATTTATAAAAAAAATGATTGTTGTCCTTAGAGCAAATCTGGCAAAAGAGGAAGAAATCACAACCCCTGAACAATGGGAA
GCAAATTTAACTGCTTCTAGAGTCGTCATCGCAGCCTGTCTATATGTTCAATCGCAAATTTCATCTCCCAAAAATAACTC
CGCATTATATCGATTGATTAATAAGGATTTAGGCATTACTGATACAAATTATCTGGATGATGAAGACAAGGAAATCTGCT
TTTTAGCTGCCAATAGAGTGGTCAACTCCTCTTTATCCGCATTTAGCGATGCCAACGCAGCCTTGCGCAAAGCCAATATG
AAGCCATTTACCGAGCAGGAGTGGAGTGACTTTTCCAAGTTTGTCAGTAGTGTGAGTGTTAAAAAGGTATCTACCAATCC
TTACTCGAACTATCCCGTCACATCCATTACTCAACCTTTATTCGGAGCCGCTTTTTCTTATACAGGAGCAACGATTGGTT
ATCTTGGGGGGGATGTTATTAGCCAATCCTCCAAAGCGATGTCGACCAAACTACAAATTACTACCATGGTGGGAAGCAGC
CTGCTGATGCTCGGTACAACAGGGCCTATGGGTGTGGCGTTGTTCTCTCAGATCATAGCAAGTAAATTAGTCACGGCATT
TTTCAGTATTAGTTTGGCTCATGTTTTAGGAACAACCATGGGTATTATCGGACAAGGCGTAGGAATGGGCATTGGGTTAC
CTTTGGATTATGCCTACAGATTAATATGGAAAGCCAGCGCCACTATTATGAATTACTACAGCAACTATCCTAATACCTCT
CAAATGACGGGTATTCGTATTGCGGATGGCAAATCCATCATGAATGGCATAGTGATTGAATACACTCCAAGCTCTGATTT
AAAAACTGAAGAAGGACAGCAAACAGTTGAAATTACTGAAGAAGGAAAACTTCTTATCAATGGAAAAGAAGTCACTATTC
CTGACGGCGGAGTTCAACTTCCACTAGAGTTAATTAATGAATTAAAAGCTCAATTGAAGCTGCAGGAGGAAAAAGTTAGC
GAAGAAGACTCTTCCTCTTCCACATTGTTAGCAACTATTTGA

Upstream 100 bases:

>100_bases
CAACAATTTAGTAAAAATTAACCAAATCAGATTGCATTTAACCAGCTAATCGGTAAGATAAAAAACACACAAATAAATTT
TCAATGGATATGAGGTTATT

Downstream 100 bases:

>100_bases
TGTAGATGAGACAACTATCATTCTGCAATGCGAGTTGAGCCGTGCTATCTGCTCAACTCCACAGGCGCTATCATTAGCAG
TATTTCTAATAACGCATTAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 413; Mature: 413

Protein sequence:

>413_residues
MRYILPAGALTSLNFLRDDYQSERKVDLDQPPSLIGVPTLFGGTDVIARDKQTKFIKKMIVVLRANLAKEEEITTPEQWE
ANLTASRVVIAACLYVQSQISSPKNNSALYRLINKDLGITDTNYLDDEDKEICFLAANRVVNSSLSAFSDANAALRKANM
KPFTEQEWSDFSKFVSSVSVKKVSTNPYSNYPVTSITQPLFGAAFSYTGATIGYLGGDVISQSSKAMSTKLQITTMVGSS
LLMLGTTGPMGVALFSQIIASKLVTAFFSISLAHVLGTTMGIIGQGVGMGIGLPLDYAYRLIWKASATIMNYYSNYPNTS
QMTGIRIADGKSIMNGIVIEYTPSSDLKTEEGQQTVEITEEGKLLINGKEVTIPDGGVQLPLELINELKAQLKLQEEKVS
EEDSSSSTLLATI

Sequences:

>Translated_413_residues
MRYILPAGALTSLNFLRDDYQSERKVDLDQPPSLIGVPTLFGGTDVIARDKQTKFIKKMIVVLRANLAKEEEITTPEQWE
ANLTASRVVIAACLYVQSQISSPKNNSALYRLINKDLGITDTNYLDDEDKEICFLAANRVVNSSLSAFSDANAALRKANM
KPFTEQEWSDFSKFVSSVSVKKVSTNPYSNYPVTSITQPLFGAAFSYTGATIGYLGGDVISQSSKAMSTKLQITTMVGSS
LLMLGTTGPMGVALFSQIIASKLVTAFFSISLAHVLGTTMGIIGQGVGMGIGLPLDYAYRLIWKASATIMNYYSNYPNTS
QMTGIRIADGKSIMNGIVIEYTPSSDLKTEEGQQTVEITEEGKLLINGKEVTIPDGGVQLPLELINELKAQLKLQEEKVS
EEDSSSSTLLATI
>Mature_413_residues
MRYILPAGALTSLNFLRDDYQSERKVDLDQPPSLIGVPTLFGGTDVIARDKQTKFIKKMIVVLRANLAKEEEITTPEQWE
ANLTASRVVIAACLYVQSQISSPKNNSALYRLINKDLGITDTNYLDDEDKEICFLAANRVVNSSLSAFSDANAALRKANM
KPFTEQEWSDFSKFVSSVSVKKVSTNPYSNYPVTSITQPLFGAAFSYTGATIGYLGGDVISQSSKAMSTKLQITTMVGSS
LLMLGTTGPMGVALFSQIIASKLVTAFFSISLAHVLGTTMGIIGQGVGMGIGLPLDYAYRLIWKASATIMNYYSNYPNTS
QMTGIRIADGKSIMNGIVIEYTPSSDLKTEEGQQTVEITEEGKLLINGKEVTIPDGGVQLPLELINELKAQLKLQEEKVS
EEDSSSSTLLATI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44879; Mature: 44879

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYILPAGALTSLNFLRDDYQSERKVDLDQPPSLIGVPTLFGGTDVIARDKQTKFIKKMI
CCEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCEECCHHHHHHHHHH
VVLRANLAKEEEITTPEQWEANLTASRVVIAACLYVQSQISSPKNNSALYRLINKDLGIT
HHHHHHCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCC
DTNYLDDEDKEICFLAANRVVNSSLSAFSDANAALRKANMKPFTEQEWSDFSKFVSSVSV
CCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHEE
KKVSTNPYSNYPVTSITQPLFGAAFSYTGATIGYLGGDVISQSSKAMSTKLQITTMVGSS
EEEECCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHCCHHHHCCHHHHHHEEEEEEECCCC
LLMLGTTGPMGVALFSQIIASKLVTAFFSISLAHVLGTTMGIIGQGVGMGIGLPLDYAYR
EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
LIWKASATIMNYYSNYPNTSQMTGIRIADGKSIMNGIVIEYTPSSDLKTEEGQQTVEITE
HHHHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHCCEEEEECCCCCCCCCCCCEEEEEEC
EGKLLINGKEVTIPDGGVQLPLELINELKAQLKLQEEKVSEEDSSSSTLLATI
CCEEEECCCEEECCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEC
>Mature Secondary Structure
MRYILPAGALTSLNFLRDDYQSERKVDLDQPPSLIGVPTLFGGTDVIARDKQTKFIKKMI
CCEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCEECCHHHHHHHHHH
VVLRANLAKEEEITTPEQWEANLTASRVVIAACLYVQSQISSPKNNSALYRLINKDLGIT
HHHHHHCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCC
DTNYLDDEDKEICFLAANRVVNSSLSAFSDANAALRKANMKPFTEQEWSDFSKFVSSVSV
CCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHEE
KKVSTNPYSNYPVTSITQPLFGAAFSYTGATIGYLGGDVISQSSKAMSTKLQITTMVGSS
EEEECCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHCCHHHHCCHHHHHHEEEEEEECCCC
LLMLGTTGPMGVALFSQIIASKLVTAFFSISLAHVLGTTMGIIGQGVGMGIGLPLDYAYR
EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
LIWKASATIMNYYSNYPNTSQMTGIRIADGKSIMNGIVIEYTPSSDLKTEEGQQTVEITE
HHHHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHCCEEEEECCCCCCCCCCCCEEEEEEC
EGKLLINGKEVTIPDGGVQLPLELINELKAQLKLQEEKVSEEDSSSSTLLATI
CCEEEECCCEEECCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA