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The map label for this gene is 39998030

Identifier: 39998030

GI number: 39998030

Start: 3234920

End: 3236140

Strand: Reverse

Name: 39998030

Synonym: GSU2939

Alternate gene names: NA

Gene position: 3236140-3234920 (Counterclockwise)

Preceding gene: 39998031

Following gene: 39998029

Centisome position: 84.85

GC content: 59.05

Gene sequence:

>1221_bases
ATGATGAATATGCGCAAGATATCGACCATCTCCGGCGTCGCCCTCGGTACGGCCCTCCTGGCCGGCACGGCGTTCGCCGG
TCCCCGGATCACCTTTGGCCCCGAAGACCAGGGCGCCCTCCAGATCGACTACAAGGGCCAGTTCCAGATGTCGATCCGCG
ACAACGGCTCCGGCGCCAACGGTGACGATACCACCACCAACTTCAACTTCCGCCGCAACCGTCTCGCCTTTATGGGCAAG
TACGGCGATATGCTGAGCCTTTATGTTCAGACCGAATTCACCGAAGATCCCAACGTGGGTACCCTCGGAGTCGGCGACAA
CAGCGCCGACACGGAGTTCCAGCTTCTCGACGCCGTTATGCGTTTCAAATTCCACGATGGGTTCCGGGTCAATGTGGGTA
AATTCAAGCACAACCTGACCCGTGAGAATCTCGAAGCGTGCGAAATGCCTCTGACCCTGGACCGGTCCCTCTTTATCCGC
GCCCCCTATGTTTCGACCCGCGACGTGGGTGTGGCGGTCTGGGGTAACCTGTTCAACGACGTCTTCCAGTATCGCCTCGA
CGCGATGGAAGGCCGCAAGGCCGGCGACCGGGATGCCAACGGCTATTCTTCGCCTGATTCGAACTTCCGCTATACGGCCC
GCGCTCACGTGACACTGCTCGATCCCGAGAAGGATTACGGCTACAAGGGTACCTACATGGGCGAGAAGCAGGTCCTGACC
GTGGGCGCCGGGGTTCAGTACGAGCCGAACGTCGCTTATGGCAATGCCGCCACTCAGTCCGACTCCAAGGATTACACCGC
CTGGACTGTTGACGGTTATTTCGAGTATCCGGTCGAAGGCTTCGGCACCATCACCGCTTCTGCCGCCTACGCCGACTTCA
GCATGGATGACGCATATACCGTATCCACCAATGTGGACAGCGGTGCCATTGGCCTCAACGGCGAGAAAAACGGCTGGTAT
GCCAAGGCCGGTTACATGCTCCCCAACTTCCCGCTCCAGATCTTCGGCCGCTACGAGCGGTGGAGCTTCGCCAGCCTCAA
CAATGTGGTGGACCAGGACATCAACTGGTACGGCGTCGGCGCCAACTACTACATCTGGGGCCAGAACCTGAAACTGACGG
CCGAGATCAGCAAGACCGACTTCGACAAGGAAGGCACGTACAACGGAGTCAAGAGCGAGGACTTCACCACGTTCATCACC
CAGCTCCAGCTCCTTTTCTAG

Upstream 100 bases:

>100_bases
GGTGGCGGCTCGACCGGTGGCGGTGGCTGCTAGCAGTGAGCGACGTTCTTGATCCCCGCCCCTCGGGGCGGGGGACTTCT
CAATTAAAAGGAGCGAATGC

Downstream 100 bases:

>100_bases
GGCTGAGCGCAGCACAACCACACGCAGGAGGTAAGAACAATGAAGAAGATCATGATGTCGATCGCGGCGGCTCTCGTGGC
CCTTTCCATGGCGGCATTCG

Product: outer membrane porin FmdC

Products: NA

Alternate protein names: Outer Membrane Porin FmdC; Phosphate-Selective Porin O And P Superfamily Protein

Number of amino acids: Translated: 406; Mature: 406

Protein sequence:

>406_residues
MMNMRKISTISGVALGTALLAGTAFAGPRITFGPEDQGALQIDYKGQFQMSIRDNGSGANGDDTTTNFNFRRNRLAFMGK
YGDMLSLYVQTEFTEDPNVGTLGVGDNSADTEFQLLDAVMRFKFHDGFRVNVGKFKHNLTRENLEACEMPLTLDRSLFIR
APYVSTRDVGVAVWGNLFNDVFQYRLDAMEGRKAGDRDANGYSSPDSNFRYTARAHVTLLDPEKDYGYKGTYMGEKQVLT
VGAGVQYEPNVAYGNAATQSDSKDYTAWTVDGYFEYPVEGFGTITASAAYADFSMDDAYTVSTNVDSGAIGLNGEKNGWY
AKAGYMLPNFPLQIFGRYERWSFASLNNVVDQDINWYGVGANYYIWGQNLKLTAEISKTDFDKEGTYNGVKSEDFTTFIT
QLQLLF

Sequences:

>Translated_406_residues
MMNMRKISTISGVALGTALLAGTAFAGPRITFGPEDQGALQIDYKGQFQMSIRDNGSGANGDDTTTNFNFRRNRLAFMGK
YGDMLSLYVQTEFTEDPNVGTLGVGDNSADTEFQLLDAVMRFKFHDGFRVNVGKFKHNLTRENLEACEMPLTLDRSLFIR
APYVSTRDVGVAVWGNLFNDVFQYRLDAMEGRKAGDRDANGYSSPDSNFRYTARAHVTLLDPEKDYGYKGTYMGEKQVLT
VGAGVQYEPNVAYGNAATQSDSKDYTAWTVDGYFEYPVEGFGTITASAAYADFSMDDAYTVSTNVDSGAIGLNGEKNGWY
AKAGYMLPNFPLQIFGRYERWSFASLNNVVDQDINWYGVGANYYIWGQNLKLTAEISKTDFDKEGTYNGVKSEDFTTFIT
QLQLLF
>Mature_406_residues
MMNMRKISTISGVALGTALLAGTAFAGPRITFGPEDQGALQIDYKGQFQMSIRDNGSGANGDDTTTNFNFRRNRLAFMGK
YGDMLSLYVQTEFTEDPNVGTLGVGDNSADTEFQLLDAVMRFKFHDGFRVNVGKFKHNLTRENLEACEMPLTLDRSLFIR
APYVSTRDVGVAVWGNLFNDVFQYRLDAMEGRKAGDRDANGYSSPDSNFRYTARAHVTLLDPEKDYGYKGTYMGEKQVLT
VGAGVQYEPNVAYGNAATQSDSKDYTAWTVDGYFEYPVEGFGTITASAAYADFSMDDAYTVSTNVDSGAIGLNGEKNGWY
AKAGYMLPNFPLQIFGRYERWSFASLNNVVDQDINWYGVGANYYIWGQNLKLTAEISKTDFDKEGTYNGVKSEDFTTFIT
QLQLLF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45199; Mature: 45199

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNMRKISTISGVALGTALLAGTAFAGPRITFGPEDQGALQIDYKGQFQMSIRDNGSGAN
CCCCHHCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCEEEEEECCEEEEEEECCCCCCC
GDDTTTNFNFRRNRLAFMGKYGDMLSLYVQTEFTEDPNVGTLGVGDNSADTEFQLLDAVM
CCCCCEECCEECCEEEEEECCCCEEEEEEEEECCCCCCCEEEECCCCCCCCHHHHHHHHH
RFKFHDGFRVNVGKFKHNLTRENLEACEMPLTLDRSLFIRAPYVSTRDVGVAVWGNLFND
HHHCCCCEEEEHHHHHHHCCHHHHHHHCCCEEECCEEEEECCCCCCCCCCEEEHHHHHHH
VFQYRLDAMEGRKAGDRDANGYSSPDSNFRYTARAHVTLLDPEKDYGYKGTYMGEKQVLT
HHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCCCEECCCCEEEE
VGAGVQYEPNVAYGNAATQSDSKDYTAWTVDGYFEYPVEGFGTITASAAYADFSMDDAYT
ECCCCEECCCEEECCCCCCCCCCCEEEEEECCEEECCCCCCCEEEEEEEEECCCCCCCEE
VSTNVDSGAIGLNGEKNGWYAKAGYMLPNFPLQIFGRYERWSFASLNNVVDQDINWYGVG
EECCCCCCEEECCCCCCCEEEEECCCCCCCCHHEEECCCCCCHHHHHHHHHCCCCEEECC
ANYYIWGQNLKLTAEISKTDFDKEGTYNGVKSEDFTTFITQLQLLF
CEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MMNMRKISTISGVALGTALLAGTAFAGPRITFGPEDQGALQIDYKGQFQMSIRDNGSGAN
CCCCHHCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCEEEEEECCEEEEEEECCCCCCC
GDDTTTNFNFRRNRLAFMGKYGDMLSLYVQTEFTEDPNVGTLGVGDNSADTEFQLLDAVM
CCCCCEECCEECCEEEEEECCCCEEEEEEEEECCCCCCCEEEECCCCCCCCHHHHHHHHH
RFKFHDGFRVNVGKFKHNLTRENLEACEMPLTLDRSLFIRAPYVSTRDVGVAVWGNLFND
HHHCCCCEEEEHHHHHHHCCHHHHHHHCCCEEECCEEEEECCCCCCCCCCEEEHHHHHHH
VFQYRLDAMEGRKAGDRDANGYSSPDSNFRYTARAHVTLLDPEKDYGYKGTYMGEKQVLT
HHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCCCEECCCCEEEE
VGAGVQYEPNVAYGNAATQSDSKDYTAWTVDGYFEYPVEGFGTITASAAYADFSMDDAYT
ECCCCEECCCEEECCCCCCCCCCCEEEEEECCEEECCCCCCCEEEEEEEEECCCCCCCEE
VSTNVDSGAIGLNGEKNGWYAKAGYMLPNFPLQIFGRYERWSFASLNNVVDQDINWYGVG
EECCCCCCEEECCCCCCCEEEEECCCCCCCCHHEEECCCCCCHHHHHHHHHCCCCEEECC
ANYYIWGQNLKLTAEISKTDFDKEGTYNGVKSEDFTTFITQLQLLF
CEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA