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The map label for this gene is 39998025

Identifier: 39998025

GI number: 39998025

Start: 3229906

End: 3231159

Strand: Reverse

Name: 39998025

Synonym: GSU2934

Alternate gene names: NA

Gene position: 3231159-3229906 (Counterclockwise)

Preceding gene: 39998026

Following gene: 39998024

Centisome position: 84.72

GC content: 68.9

Gene sequence:

>1254_bases
ATGCTCTGCATCGCCGCCTGCTTACTGGCAGCGCCGGTCGCGCCGTGGCCCGCTGACGCCGCCACGGGCGAAAATTGCCG
CGTCTGCCATCGGGATGTCCTTACCGGCCCCCATGCAGGCATCGGCTGTTCCCCCTGCCACGGCGACGACCGGGCCACTG
TGCGCAACCCGGCACTCGTGGCCGACCGCGCCGCCCGGTGCGTGGCTTGCCACCGTGGATACGACCGTCTCTTCGACCAC
CCCATGACCACCCGGAGCGCGGAACGGCGCTTCGTGGCCGATACCCTGGGGCGAGCCGACGGAGCATTCTTCCGCAACCA
GTGCGGCGGCTGCCACGTAACGGGCTGCCTCGACTGCCATCCCGGCGGCGGCCATGCCTTGGCCCGCCCCCGGGATGCCC
AGTGTCTCTCCTGCCACCGGGGCTACTTCGTGGGCACCGACTACCACGGCCGGGCGCCCCGGGAGGATGCCCTGCGCTAC
CAGCGGGGTGAGCTGGCCAACGGCGAGACCTTCCTCCCCATGCTGCCCGACGTCCATGCCGAGGCAGGGATGGGGTGCGC
CGACTGCCACTCCATGGCGAGCCTGGCTGCCGGCAAGCGGACCGCAAAGAGGTGCACCGACTGTCACACGCCGGATCCGC
GGGTGGTTGAACACCGCATCGCCGCCCACCAGGACCGGCTCGAATGCGTTGCCTGCCATGCCGCGTGGGCACCCCAGGAG
TACGGTACCTTCTGGCTGCGCTTCACCAACAGCCCCCGGCTCCAGTCCCGCTTCCAGGTGGTCACCCGTCAGGACGACTG
GGTAAAGAGTGCCTATCTCAAGCGGCAGGACGCCCCCCCCCTCGCGCTCAACGAAGCGGGGCGGGTGAGCCCGGCCCGGC
CCCAGTTCATCCTTTACCATTCGGATTTCCGCAACGAACGGGTAGTGGGGCAGGAGAACCGGCTCCTGGCAGCCCGCTGG
AAGACCTTCGCCCCTCACACCATCCGGCGCGAAACGGTCATGTGCGACGGCTGTCACGACAACCCGCGGCGCTTTCTGCT
GGAACCGCCCCACGAGCGGATCTACCGGACCCGGGCCGATGGCCTTTCTCTCGATTCCTTCTGGGACCGCACCGGCCAGC
GGATTGCCAACGGTACGTTCATGGAGCCGGAGCGGGTGCGGCGCATGGGGGTGCGGACCCCCGAATACACGAAAGGGTAT
CTGGAACGATGGCGGGATTTGACCGGGGACGCCGGCGGTTCATCGCGGCGTTAG

Upstream 100 bases:

>100_bases
GAGGCAAAACGGGTTTGGCGGGCAAACCTTTGCATCGTCTGCCACACCCGGGCCGACGATCCCATCTACCGCAAGGAGCT
CGACTATCGTGCGCTGGATG

Downstream 100 bases:

>100_bases
CCGCATTCACGGCCTCGCTGGCGGCGGCGTGGCGCTTTCTCGTTCCCGCGGGGCGGGGCGGGGGAGAGCGATTCACCGTT
GCCAAGGCATCGATCCCCCC

Product: cytochrome C

Products: NA

Alternate protein names: Multiheme C-Type Cytochrome; Cytochrome C

Number of amino acids: Translated: 417; Mature: 417

Protein sequence:

>417_residues
MLCIAACLLAAPVAPWPADAATGENCRVCHRDVLTGPHAGIGCSPCHGDDRATVRNPALVADRAARCVACHRGYDRLFDH
PMTTRSAERRFVADTLGRADGAFFRNQCGGCHVTGCLDCHPGGGHALARPRDAQCLSCHRGYFVGTDYHGRAPREDALRY
QRGELANGETFLPMLPDVHAEAGMGCADCHSMASLAAGKRTAKRCTDCHTPDPRVVEHRIAAHQDRLECVACHAAWAPQE
YGTFWLRFTNSPRLQSRFQVVTRQDDWVKSAYLKRQDAPPLALNEAGRVSPARPQFILYHSDFRNERVVGQENRLLAARW
KTFAPHTIRRETVMCDGCHDNPRRFLLEPPHERIYRTRADGLSLDSFWDRTGQRIANGTFMEPERVRRMGVRTPEYTKGY
LERWRDLTGDAGGSSRR

Sequences:

>Translated_417_residues
MLCIAACLLAAPVAPWPADAATGENCRVCHRDVLTGPHAGIGCSPCHGDDRATVRNPALVADRAARCVACHRGYDRLFDH
PMTTRSAERRFVADTLGRADGAFFRNQCGGCHVTGCLDCHPGGGHALARPRDAQCLSCHRGYFVGTDYHGRAPREDALRY
QRGELANGETFLPMLPDVHAEAGMGCADCHSMASLAAGKRTAKRCTDCHTPDPRVVEHRIAAHQDRLECVACHAAWAPQE
YGTFWLRFTNSPRLQSRFQVVTRQDDWVKSAYLKRQDAPPLALNEAGRVSPARPQFILYHSDFRNERVVGQENRLLAARW
KTFAPHTIRRETVMCDGCHDNPRRFLLEPPHERIYRTRADGLSLDSFWDRTGQRIANGTFMEPERVRRMGVRTPEYTKGY
LERWRDLTGDAGGSSRR
>Mature_417_residues
MLCIAACLLAAPVAPWPADAATGENCRVCHRDVLTGPHAGIGCSPCHGDDRATVRNPALVADRAARCVACHRGYDRLFDH
PMTTRSAERRFVADTLGRADGAFFRNQCGGCHVTGCLDCHPGGGHALARPRDAQCLSCHRGYFVGTDYHGRAPREDALRY
QRGELANGETFLPMLPDVHAEAGMGCADCHSMASLAAGKRTAKRCTDCHTPDPRVVEHRIAAHQDRLECVACHAAWAPQE
YGTFWLRFTNSPRLQSRFQVVTRQDDWVKSAYLKRQDAPPLALNEAGRVSPARPQFILYHSDFRNERVVGQENRLLAARW
KTFAPHTIRRETVMCDGCHDNPRRFLLEPPHERIYRTRADGLSLDSFWDRTGQRIANGTFMEPERVRRMGVRTPEYTKGY
LERWRDLTGDAGGSSRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46700; Mature: 46700

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: PS51008 MULTIHEME_CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
5.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLCIAACLLAAPVAPWPADAATGENCRVCHRDVLTGPHAGIGCSPCHGDDRATVRNPALV
CHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHH
ADRAARCVACHRGYDRLFDHPMTTRSAERRFVADTLGRADGAFFRNQCGGCHVTGCLDCH
HHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHCCCCEEEEEEEECC
PGGGHALARPRDAQCLSCHRGYFVGTDYHGRAPREDALRYQRGELANGETFLPMLPDVHA
CCCCCCCCCCCCCHHHHHCCCEEECCCCCCCCCHHHHHHHHCCCCCCCCEECCCCCCCHH
EAGMGCADCHSMASLAAGKRTAKRCTDCHTPDPRVVEHRIAAHQDRLECVACHAAWAPQE
HCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHEEEHHHHCCCCC
YGTFWLRFTNSPRLQSRFQVVTRQDDWVKSAYLKRQDAPPLALNEAGRVSPARPQFILYH
CCEEEEEECCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCEEECCCCCCCCCCCCEEEEE
SDFRNERVVGQENRLLAARWKTFAPHTIRRETVMCDGCHDNPRRFLLEPPHERIYRTRAD
CCCCCCCCCCCCCCEEEEHHHHCCCCHHCCCEEEECCCCCCCCCCCCCCCHHHHHHHHCC
GLSLDSFWDRTGQRIANGTFMEPERVRRMGVRTPEYTKGYLERWRDLTGDAGGSSRR
CCCHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MLCIAACLLAAPVAPWPADAATGENCRVCHRDVLTGPHAGIGCSPCHGDDRATVRNPALV
CHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHH
ADRAARCVACHRGYDRLFDHPMTTRSAERRFVADTLGRADGAFFRNQCGGCHVTGCLDCH
HHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHCCCCEEEEEEEECC
PGGGHALARPRDAQCLSCHRGYFVGTDYHGRAPREDALRYQRGELANGETFLPMLPDVHA
CCCCCCCCCCCCCHHHHHCCCEEECCCCCCCCCHHHHHHHHCCCCCCCCEECCCCCCCHH
EAGMGCADCHSMASLAAGKRTAKRCTDCHTPDPRVVEHRIAAHQDRLECVACHAAWAPQE
HCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHEEEHHHHCCCCC
YGTFWLRFTNSPRLQSRFQVVTRQDDWVKSAYLKRQDAPPLALNEAGRVSPARPQFILYH
CCEEEEEECCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCEEECCCCCCCCCCCCEEEEE
SDFRNERVVGQENRLLAARWKTFAPHTIRRETVMCDGCHDNPRRFLLEPPHERIYRTRAD
CCCCCCCCCCCCCCEEEEHHHHCCCCHHCCCEEEECCCCCCCCCCCCCCCHHHHHHHHCC
GLSLDSFWDRTGQRIANGTFMEPERVRRMGVRTPEYTKGYLERWRDLTGDAGGSSRR
CCCHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA