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The map label for this gene is petC [H]

Identifier: 39998024

GI number: 39998024

Start: 3229556

End: 3229951

Strand: Reverse

Name: petC [H]

Synonym: GSU2933

Alternate gene names: 39998024

Gene position: 3229951-3229556 (Counterclockwise)

Preceding gene: 39998025

Following gene: 39998023

Centisome position: 84.68

GC content: 66.92

Gene sequence:

>396_bases
ATGGCGGGATTTGACCGGGGACGCCGGCGGTTCATCGCGGCGTTAGCCGCATTCACGGCCTCGCTGGCGGCGGCGTGGCG
CTTTCTCGTTCCCGCGGGGCGGGGCGGGGGAGAGCGATTCACCGTTGCCAAGGCATCGATCCCCCCACGGGGCGCCCTTG
TGTTCAAGGAACGGCACCTGGCGGTCATGAGGGATGGGGATACGCTCTATGCCCTTGACCTCACCTGCACCCATCTGGGC
TGCACGGTAACCGTCACGCCGTCGGAGATTGTCTGTCCCTGTCACGGCAGCCGCTTCGACCTGAAGGGAAACGTTGCCAA
AGGTCCCGCCGACCGTCCCCTGGCCCGCCATCGGGTGGAGGACCGGGGCGAGCGGGTGGAGATTGTCATCGGATGA

Upstream 100 bases:

>100_bases
GCACCGGCCAGCGGATTGCCAACGGTACGTTCATGGAGCCGGAGCGGGTGCGGCGCATGGGGGTGCGGACCCCCGAATAC
ACGAAAGGGTATCTGGAACG

Downstream 100 bases:

>100_bases
TCAAGGAATTCGCCAAACATCTCTTCCCCCGGGTGGTCCTGCGGGAGAACCTGCGGTTCAGCTACACATTCTGTCTGGGC
GGACTCGCCTTTACGGCATT

Product: cytochrome b/b6 complex, iron-sulfur subunit

Products: NA

Alternate protein names: Plastohydroquinone:plastocyanin oxidoreductase iron-sulfur protein; Rieske iron-sulfur protein; ISP; RISP [H]

Number of amino acids: Translated: 131; Mature: 130

Protein sequence:

>131_residues
MAGFDRGRRRFIAALAAFTASLAAAWRFLVPAGRGGGERFTVAKASIPPRGALVFKERHLAVMRDGDTLYALDLTCTHLG
CTVTVTPSEIVCPCHGSRFDLKGNVAKGPADRPLARHRVEDRGERVEIVIG

Sequences:

>Translated_131_residues
MAGFDRGRRRFIAALAAFTASLAAAWRFLVPAGRGGGERFTVAKASIPPRGALVFKERHLAVMRDGDTLYALDLTCTHLG
CTVTVTPSEIVCPCHGSRFDLKGNVAKGPADRPLARHRVEDRGERVEIVIG
>Mature_130_residues
AGFDRGRRRFIAALAAFTASLAAAWRFLVPAGRGGGERFTVAKASIPPRGALVFKERHLAVMRDGDTLYALDLTCTHLGC
TVTVTPSEIVCPCHGSRFDLKGNVAKGPADRPLARHRVEDRGERVEIVIG

Specific function: Component of the green S-bacteria bc-complex which consists of the Rieske protein and cytochrome b subunit and which appears to lack a cytochrome c1-equivalent. This complex has a comparatively low redox potential [H]

COG id: COG0723

COG function: function code C; Rieske Fe-S protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014909
- InterPro:   IPR017941
- InterPro:   IPR014349
- InterPro:   IPR005805 [H]

Pfam domain/function: PF08802 CytB6-F_Fe-S; PF00355 Rieske [H]

EC number: =1.10.99.1 [H]

Molecular weight: Translated: 14144; Mature: 14012

Theoretical pI: Translated: 10.45; Mature: 10.45

Prosite motif: PS00199 RIESKE_1 ; PS00200 RIESKE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGFDRGRRRFIAALAAFTASLAAAWRFLVPAGRGGGERFTVAKASIPPRGALVFKERHL
CCCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCEEEEEECCCCCCCEEEEECCCE
AVMRDGDTLYALDLTCTHLGCTVTVTPSEIVCPCHGSRFDLKGNVAKGPADRPLARHRVE
EEEECCCEEEEEEEEEEECCEEEEECCCCEEECCCCCEEEECCCCCCCCCCCCHHHHHHC
DRGERVEIVIG
CCCCEEEEEEC
>Mature Secondary Structure 
AGFDRGRRRFIAALAAFTASLAAAWRFLVPAGRGGGERFTVAKASIPPRGALVFKERHL
CCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCEEEEEECCCCCCCEEEEECCCE
AVMRDGDTLYALDLTCTHLGCTVTVTPSEIVCPCHGSRFDLKGNVAKGPADRPLARHRVE
EEEECCCEEEEEEEEEEECCEEEEECCCCEEECCCCCEEEECCCCCCCCCCCCHHHHHHC
DRGERVEIVIG
CCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA