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The map label for this gene is ycgR [H]

Identifier: 39997998

GI number: 39997998

Start: 3199825

End: 3201660

Strand: Reverse

Name: ycgR [H]

Synonym: GSU2907

Alternate gene names: 39997998

Gene position: 3201660-3199825 (Counterclockwise)

Preceding gene: 39997999

Following gene: 39997997

Centisome position: 83.94

GC content: 66.07

Gene sequence:

>1836_bases
ATGCTGATCGTCATGGTTCTGATCTCGTTGTCCCTAGTGGTCTGGCACGTGTGGGGCACGGGCACCGGCGGGCACCTGGT
CTCCTCCGATGCCGCGCCGGTTTCGTTCCCCGTGCTGCTCGGCAGCGAGCTCTGGGACCTGTTTTTCAGCGACCACGGGG
TAATGGCCGAGCTCCGTGACGTGCTGCCCTATTTCATCGTGGGCATTCTCATTGCCGGCTACCTCCGGACCTTCAAGGTT
GCCGTGAAACTCCAGGCATCCCTCAGAAAGTACGGGGCCCTGAGCGTCTTTCTCGCGTCCTTCGTGGGGATCATCACCCC
CCTGTGCGCCTGCGGCACGGTGACCACCGCCATCAGCCTCCTGGTGGCGGGGATTCCCCTGGCGCCGGTCATGGCCCTGA
TGGTGACCTCGCCGCTGTTGAGCCCGTCAACCTATCTCCTTACCCTGAACGACCTGGGTCCCGAGTGGACCGTGGTCAGG
ACCATCTCCGCCTTCTCCATGGGGATCTTCGCCGGGCTGGTGACCCTTGCCCTCAGCAAGCGGCCCGGTTTCCGGAAGAA
CGAGATCTTCGTCGAAGGGGGGATCGTGCGGGGCGATTTCCACGACGAGGACTACCCGGACGAGCGGCTGCGGTGCAACT
GCCGGCGGAAATTCGGCAACCGGGTCGCCGTCAGGACCGGCAACAAGTTCCTCATCTTCCTGGCCAAGTCCGCGGAGATG
GTCTGGGTGGTGGGGAAGTACGTCATCGTGGGGGTGGTCATCGGCGCGGTGGTGGAGCGCTACCTGCCCAAGGAGTGGAT
TTACCGCTTCTTCGGCCGGACGGATCCCCTGAACATCGTCTGGGTGACCCTGGCGTCGGTACCAATGTTCCTGCACCAGA
TCAGCGCGTCCAGCATCGTCTACCATATCAAGGGAGCCCTGGGCGGGACCATGGACGCCGGGGCGGCCCTTGCGTTCATG
ATCGGCGGACCGGTGACCGCGGTGCCCACCATGGTGCTCTTCTGGACCTTTTTCAAGAAGCGGGTCTTCTTCCTCTACAT
GTTCGCCTGCCTTTCGGGGACGCTCCTGATTGCTTACGCCTTCCGGCTCCTGGTGTTCGTGCCGGGCGTGGATGTGGGCA
ATCCTCTCCTGCGGGGGGTCGCGTCGTTGTCCGGCGGCACATCCGCCGTGGTCCTGAAGCACGATCCCAACGTGCGGATG
GTGATGGACCCCGCCGGCAAGGGGACCGTCGCCACCTACACCAATGCCGTGGACGGGCGGGGGGGGGTCGTGTTCGACGG
GACGTACGGACGGTTCACCGCAGCCATGGCCGACCGCTACGACACCGGGGCCTACATCGGCAACATCGCCGACTGGCTCG
AAGAGAATTCCCTCTCGGCCGCCTCCACCAGAATCCTCGTCTGCCGCCTCGGGGACGGTGCCGGCGGTGCCGCGGTGCTG
CTGGGGGAGAAGGTCTTGGCCGAACTCGCGGCGCGGGGCTTCACCGTGAAGACGGTGGACCGGCGCGAGGTGCCGCGCCT
CACCGGAGGGCTGCTGGCGGAGTGGGGCCAGGTCTGGCTCTTCTGCGGCGATGACGGCGCCGCCGGGCTCAGCGATGCCG
AGGCGAAACTCCTGGCGGACCATAACGCCCGGGGAGGCGCCGCCCTGGTCGTGCCGCTGCCGTCAGCCGGCGCAGCGGAT
TTCCGCGGGGCCAACCTCTTCGCTTCCCGTTACGGGGTGACCTTCTCCGGTGTCGCCGACACGGGCGGGGAGGTGCGGGT
TTCCACCGCCTCATCCGTCTTCAACCGGGCCTCCGCGTGGCTCGGCTCTGTTCTGAAGCTTGTCAGGAAGGCCTGA

Upstream 100 bases:

>100_bases
CAGCCGGCACGGGCAGGGTATCGTGCTCGTGAATCCGTTCAGGGCAAAACCGAGGGAGGCCTGCGAGGTCCACGGACACC
AGGCTGAGTCGGGGAACCGG

Downstream 100 bases:

>100_bases
AGCGGGTACCTTGGGTACCCCATGAGCCGGGATGACACAACCACATTCAGGAGGAATGCATGAAATCACAGGTGCTCGAC
GTCCAGACCCTCAAAACGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 611; Mature: 611

Protein sequence:

>611_residues
MLIVMVLISLSLVVWHVWGTGTGGHLVSSDAAPVSFPVLLGSELWDLFFSDHGVMAELRDVLPYFIVGILIAGYLRTFKV
AVKLQASLRKYGALSVFLASFVGIITPLCACGTVTTAISLLVAGIPLAPVMALMVTSPLLSPSTYLLTLNDLGPEWTVVR
TISAFSMGIFAGLVTLALSKRPGFRKNEIFVEGGIVRGDFHDEDYPDERLRCNCRRKFGNRVAVRTGNKFLIFLAKSAEM
VWVVGKYVIVGVVIGAVVERYLPKEWIYRFFGRTDPLNIVWVTLASVPMFLHQISASSIVYHIKGALGGTMDAGAALAFM
IGGPVTAVPTMVLFWTFFKKRVFFLYMFACLSGTLLIAYAFRLLVFVPGVDVGNPLLRGVASLSGGTSAVVLKHDPNVRM
VMDPAGKGTVATYTNAVDGRGGVVFDGTYGRFTAAMADRYDTGAYIGNIADWLEENSLSAASTRILVCRLGDGAGGAAVL
LGEKVLAELAARGFTVKTVDRREVPRLTGGLLAEWGQVWLFCGDDGAAGLSDAEAKLLADHNARGGAALVVPLPSAGAAD
FRGANLFASRYGVTFSGVADTGGEVRVSTASSVFNRASAWLGSVLKLVRKA

Sequences:

>Translated_611_residues
MLIVMVLISLSLVVWHVWGTGTGGHLVSSDAAPVSFPVLLGSELWDLFFSDHGVMAELRDVLPYFIVGILIAGYLRTFKV
AVKLQASLRKYGALSVFLASFVGIITPLCACGTVTTAISLLVAGIPLAPVMALMVTSPLLSPSTYLLTLNDLGPEWTVVR
TISAFSMGIFAGLVTLALSKRPGFRKNEIFVEGGIVRGDFHDEDYPDERLRCNCRRKFGNRVAVRTGNKFLIFLAKSAEM
VWVVGKYVIVGVVIGAVVERYLPKEWIYRFFGRTDPLNIVWVTLASVPMFLHQISASSIVYHIKGALGGTMDAGAALAFM
IGGPVTAVPTMVLFWTFFKKRVFFLYMFACLSGTLLIAYAFRLLVFVPGVDVGNPLLRGVASLSGGTSAVVLKHDPNVRM
VMDPAGKGTVATYTNAVDGRGGVVFDGTYGRFTAAMADRYDTGAYIGNIADWLEENSLSAASTRILVCRLGDGAGGAAVL
LGEKVLAELAARGFTVKTVDRREVPRLTGGLLAEWGQVWLFCGDDGAAGLSDAEAKLLADHNARGGAALVVPLPSAGAAD
FRGANLFASRYGVTFSGVADTGGEVRVSTASSVFNRASAWLGSVLKLVRKA
>Mature_611_residues
MLIVMVLISLSLVVWHVWGTGTGGHLVSSDAAPVSFPVLLGSELWDLFFSDHGVMAELRDVLPYFIVGILIAGYLRTFKV
AVKLQASLRKYGALSVFLASFVGIITPLCACGTVTTAISLLVAGIPLAPVMALMVTSPLLSPSTYLLTLNDLGPEWTVVR
TISAFSMGIFAGLVTLALSKRPGFRKNEIFVEGGIVRGDFHDEDYPDERLRCNCRRKFGNRVAVRTGNKFLIFLAKSAEM
VWVVGKYVIVGVVIGAVVERYLPKEWIYRFFGRTDPLNIVWVTLASVPMFLHQISASSIVYHIKGALGGTMDAGAALAFM
IGGPVTAVPTMVLFWTFFKKRVFFLYMFACLSGTLLIAYAFRLLVFVPGVDVGNPLLRGVASLSGGTSAVVLKHDPNVRM
VMDPAGKGTVATYTNAVDGRGGVVFDGTYGRFTAAMADRYDTGAYIGNIADWLEENSLSAASTRILVCRLGDGAGGAAVL
LGEKVLAELAARGFTVKTVDRREVPRLTGGLLAEWGQVWLFCGDDGAAGLSDAEAKLLADHNARGGAALVVPLPSAGAAD
FRGANLFASRYGVTFSGVADTGGEVRVSTASSVFNRASAWLGSVLKLVRKA

Specific function: Unknown

COG id: COG0701

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0718 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005524 [H]

Pfam domain/function: PF03773 DUF318 [H]

EC number: NA

Molecular weight: Translated: 65210; Mature: 65210

Theoretical pI: Translated: 9.34; Mature: 9.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIVMVLISLSLVVWHVWGTGTGGHLVSSDAAPVSFPVLLGSELWDLFFSDHGVMAELRD
CCHHHHHHHHHHHHHEEECCCCCCCEECCCCCCCEEHHHHHHHHHHHHHCCCCHHHHHHH
VLPYFIVGILIAGYLRTFKVAVKLQASLRKYGALSVFLASFVGIITPLCACGTVTTAISL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVAGIPLAPVMALMVTSPLLSPSTYLLTLNDLGPEWTVVRTISAFSMGIFAGLVTLALSK
HHHCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHC
RPGFRKNEIFVEGGIVRGDFHDEDYPDERLRCNCRRKFGNRVAVRTGNKFLIFLAKSAEM
CCCCCCCEEEEECCEEECCCCCCCCCCHHHHHHHHHHCCCEEEEEECCEEEEEEECCCCE
VWVVGKYVIVGVVIGAVVERYLPKEWIYRFFGRTDPLNIVWVTLASVPMFLHQISASSIV
EEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHEE
YHIKGALGGTMDAGAALAFMIGGPVTAVPTMVLFWTFFKKRVFFLYMFACLSGTLLIAYA
EEEECCCCCCCCCCHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FRLLVFVPGVDVGNPLLRGVASLSGGTSAVVLKHDPNVRMVMDPAGKGTVATYTNAVDGR
HHHHHHCCCCCCCCHHHHHHHHCCCCCEEEEEEECCCEEEEECCCCCCCEEEEECCCCCC
GGVVFDGTYGRFTAAMADRYDTGAYIGNIADWLEENSLSAASTRILVCRLGDGAGGAAVL
CCEEECCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCEEE
LGEKVLAELAARGFTVKTVDRREVPRLTGGLLAEWGQVWLFCGDDGAAGLSDAEAKLLAD
HHHHHHHHHHHCCCEEEECCHHCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHCC
HNARGGAALVVPLPSAGAADFRGANLFASRYGVTFSGVADTGGEVRVSTASSVFNRASAW
CCCCCCEEEEEECCCCCCCCCCCCCEEHHHCCCEEECCCCCCCCEEEEHHHHHHHHHHHH
LGSVLKLVRKA
HHHHHHHHHCC
>Mature Secondary Structure
MLIVMVLISLSLVVWHVWGTGTGGHLVSSDAAPVSFPVLLGSELWDLFFSDHGVMAELRD
CCHHHHHHHHHHHHHEEECCCCCCCEECCCCCCCEEHHHHHHHHHHHHHCCCCHHHHHHH
VLPYFIVGILIAGYLRTFKVAVKLQASLRKYGALSVFLASFVGIITPLCACGTVTTAISL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVAGIPLAPVMALMVTSPLLSPSTYLLTLNDLGPEWTVVRTISAFSMGIFAGLVTLALSK
HHHCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHC
RPGFRKNEIFVEGGIVRGDFHDEDYPDERLRCNCRRKFGNRVAVRTGNKFLIFLAKSAEM
CCCCCCCEEEEECCEEECCCCCCCCCCHHHHHHHHHHCCCEEEEEECCEEEEEEECCCCE
VWVVGKYVIVGVVIGAVVERYLPKEWIYRFFGRTDPLNIVWVTLASVPMFLHQISASSIV
EEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHEE
YHIKGALGGTMDAGAALAFMIGGPVTAVPTMVLFWTFFKKRVFFLYMFACLSGTLLIAYA
EEEECCCCCCCCCCHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FRLLVFVPGVDVGNPLLRGVASLSGGTSAVVLKHDPNVRMVMDPAGKGTVATYTNAVDGR
HHHHHHCCCCCCCCHHHHHHHHCCCCCEEEEEEECCCEEEEECCCCCCCEEEEECCCCCC
GGVVFDGTYGRFTAAMADRYDTGAYIGNIADWLEENSLSAASTRILVCRLGDGAGGAAVL
CCEEECCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCEEE
LGEKVLAELAARGFTVKTVDRREVPRLTGGLLAEWGQVWLFCGDDGAAGLSDAEAKLLAD
HHHHHHHHHHHCCCEEEECCHHCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHCC
HNARGGAALVVPLPSAGAADFRGANLFASRYGVTFSGVADTGGEVRVSTASSVFNRASAW
CCCCCCEEEEEECCCCCCCCCCCCCEEHHHCCCEEECCCCCCCCEEEEHHHHHHHHHHHH
LGSVLKLVRKA
HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]