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The map label for this gene is pqqE [H]

Identifier: 39997996

GI number: 39997996

Start: 3197975

End: 3199144

Strand: Reverse

Name: pqqE [H]

Synonym: GSU2905

Alternate gene names: 39997996

Gene position: 3199144-3197975 (Counterclockwise)

Preceding gene: 39997997

Following gene: 39997995

Centisome position: 83.88

GC content: 67.86

Gene sequence:

>1170_bases
ATGTCCAGGCATTCCTGGACGAACTGGCCGTCAAGGGATTTATCCGCTATGCAGAATGACAGGGAAACCGCGACGGTGAG
TTCGCGTGGCGAGCGCGGCGGCACAGGGGAGGCAACGCAGGCGCATCCGGCGATACGCCGGGGAGCCGGCGATGAGGCCA
CCGCTGCCAGCCGAGCGGACGCGCCGTCACTGGAAGCGCCCCTCACCATCAACTGGGCCATCAACAACACCTGCAACTTC
GCCTGCCGCCACTGCTACAGCCGGGGGGACACCCACGAGGAACTCCCCCGGGACGTCCTTCTGGCATGCCTGGGAAAGGC
GGCCGCTGCCGGGGTCTTTTCCGTCAATTTCGGCGGCGGGGAACCCCTCCTGCACCCGGGGCTGCTGGAGATCGCCCGGC
ACGCCAGCGGGTCGGGATTGCGGATTTCCCTGAACAGCAACGGCTGGCTCATTGACCGGGACACGGCGGCGGCCCTGCGG
GACGCCGGGTTCACCAGGGTGGGTATCAGCATCGACAGCCACCTCCCCCGGGTCCACGACCGGTTCCGCGGCGTTGACGG
CAGCCACGGCCGGGCCGTGGCTGCCCTGCGGCATCTGGCCGGGGCGGGCATCGCCACCTCTATCTCCACGGTGATCTGCC
GGATCAATCACACGGCCATCGACGATCTGGTGACCTTTGCCCGGGAGCAGGGGGTGGGACAGCTCAACTTCCACAATTTC
AAGTGCTCGGGGCTGGGTCTGTCCCACAGGGATGAACTGGACCTTTCGCCCGCCGAGTGGCGGGAGTTCTACCGGGGCGC
CCTGGCCGCCAGGGAGCGGGAGTCGGGGCTCGACGTCTCCCTGGACGACCCGATCATCGCCCTCCTGGGAGCCCGCGATG
CGGGGAGCCTCGTGAAGGGTAGCGTCTGCGGCAAGCTCTCCCTGAACATCAAGACCAACGGCGACATGACCCCCTGCGGC
TTCATTCCCGTTGTCATCGGCAACATCGTGCGGGACGACCTGAAGCAGGTCTGGCGGGACTCGGCAGTACTGGCGGCGCT
GCGTACCAAGAAGCCCACCGGCAAGTGCGCCGGCTGCAGCGCGTACGAGGACTGCCTCGGCGGCTGCTCCGCCCGGGCCC
TGGCCCTCACCGGCGACCTTAACAGTCCCGACCCCCACTGCTGGGCATGA

Upstream 100 bases:

>100_bases
GGCACTGAAATCTGGAAGCTCTGTGACGGCCGGACCCCGGAGGGCATCGTGGCGGAGCTGCTCCCCCAGTTCGAGGTGGA
CGAGGCGGTGCTGCGGGAAG

Downstream 100 bases:

>100_bases
TTCTATGGAACTTTCGTCTCCCATAACCATCTACTGGGATCTCCCCGCTACCGCGGCCGATCCGTCGCTCCTGCTGGCGA
TCGCCGCCGGGATCATCGAC

Product: radical SAM protein

Products: NA

Alternate protein names: Pyrroloquinoline quinone biosynthesis protein E [H]

Number of amino acids: Translated: 389; Mature: 388

Protein sequence:

>389_residues
MSRHSWTNWPSRDLSAMQNDRETATVSSRGERGGTGEATQAHPAIRRGAGDEATAASRADAPSLEAPLTINWAINNTCNF
ACRHCYSRGDTHEELPRDVLLACLGKAAAAGVFSVNFGGGEPLLHPGLLEIARHASGSGLRISLNSNGWLIDRDTAAALR
DAGFTRVGISIDSHLPRVHDRFRGVDGSHGRAVAALRHLAGAGIATSISTVICRINHTAIDDLVTFAREQGVGQLNFHNF
KCSGLGLSHRDELDLSPAEWREFYRGALAARERESGLDVSLDDPIIALLGARDAGSLVKGSVCGKLSLNIKTNGDMTPCG
FIPVVIGNIVRDDLKQVWRDSAVLAALRTKKPTGKCAGCSAYEDCLGGCSARALALTGDLNSPDPHCWA

Sequences:

>Translated_389_residues
MSRHSWTNWPSRDLSAMQNDRETATVSSRGERGGTGEATQAHPAIRRGAGDEATAASRADAPSLEAPLTINWAINNTCNF
ACRHCYSRGDTHEELPRDVLLACLGKAAAAGVFSVNFGGGEPLLHPGLLEIARHASGSGLRISLNSNGWLIDRDTAAALR
DAGFTRVGISIDSHLPRVHDRFRGVDGSHGRAVAALRHLAGAGIATSISTVICRINHTAIDDLVTFAREQGVGQLNFHNF
KCSGLGLSHRDELDLSPAEWREFYRGALAARERESGLDVSLDDPIIALLGARDAGSLVKGSVCGKLSLNIKTNGDMTPCG
FIPVVIGNIVRDDLKQVWRDSAVLAALRTKKPTGKCAGCSAYEDCLGGCSARALALTGDLNSPDPHCWA
>Mature_388_residues
SRHSWTNWPSRDLSAMQNDRETATVSSRGERGGTGEATQAHPAIRRGAGDEATAASRADAPSLEAPLTINWAINNTCNFA
CRHCYSRGDTHEELPRDVLLACLGKAAAAGVFSVNFGGGEPLLHPGLLEIARHASGSGLRISLNSNGWLIDRDTAAALRD
AGFTRVGISIDSHLPRVHDRFRGVDGSHGRAVAALRHLAGAGIATSISTVICRINHTAIDDLVTFAREQGVGQLNFHNFK
CSGLGLSHRDELDLSPAEWREFYRGALAARERESGLDVSLDDPIIALLGARDAGSLVKGSVCGKLSLNIKTNGDMTPCGF
IPVVIGNIVRDDLKQVWRDSAVLAALRTKKPTGKCAGCSAYEDCLGGCSARALALTGDLNSPDPHCWA

Specific function: Together With Moac, Is Involved In The Conversion Of A Guanosine Derivative (Gxp) Into Molybdopterin Precursor Z. [C]

COG id: COG0535

COG function: function code R; Predicted Fe-S oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the radical SAM superfamily. PqqE family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR006638
- InterPro:   IPR000385
- InterPro:   IPR017200
- InterPro:   IPR011843
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 41332; Mature: 41201

Theoretical pI: Translated: 7.32; Mature: 7.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRHSWTNWPSRDLSAMQNDRETATVSSRGERGGTGEATQAHPAIRRGAGDEATAASRAD
CCCCCCCCCCCHHHHHHHCCCHHEEHHCCCCCCCCCCCCCCCHHHHCCCCCCHHHHCCCC
APSLEAPLTINWAINNTCNFACRHCYSRGDTHEELPRDVLLACLGKAAAAGVFSVNFGGG
CCCCCCCEEEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCC
EPLLHPGLLEIARHASGSGLRISLNSNGWLIDRDTAAALRDAGFTRVGISIDSHLPRVHD
CCCCCCHHHHHHHHCCCCCEEEEECCCCEEEECCHHHHHHHCCCEEEEEEHHHCCCHHHH
RFRGVDGSHGRAVAALRHLAGAGIATSISTVICRINHTAIDDLVTFAREQGVGQLNFHNF
HHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHEECCCHHHHHHHHHHHHCCCCEEECCCE
KCSGLGLSHRDELDLSPAEWREFYRGALAARERESGLDVSLDDPIIALLGARDAGSLVKG
EECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEECCCCEEEEEECCCCCCHHCC
SVCGKLSLNIKTNGDMTPCGFIPVVIGNIVRDDLKQVWRDSAVLAALRTKKPTGKCAGCS
CCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
AYEDCLGGCSARALALTGDLNSPDPHCWA
HHHHHHCCCCCCEEEEECCCCCCCCCCCC
>Mature Secondary Structure 
SRHSWTNWPSRDLSAMQNDRETATVSSRGERGGTGEATQAHPAIRRGAGDEATAASRAD
CCCCCCCCCCHHHHHHHCCCHHEEHHCCCCCCCCCCCCCCCHHHHCCCCCCHHHHCCCC
APSLEAPLTINWAINNTCNFACRHCYSRGDTHEELPRDVLLACLGKAAAAGVFSVNFGGG
CCCCCCCEEEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCC
EPLLHPGLLEIARHASGSGLRISLNSNGWLIDRDTAAALRDAGFTRVGISIDSHLPRVHD
CCCCCCHHHHHHHHCCCCCEEEEECCCCEEEECCHHHHHHHCCCEEEEEEHHHCCCHHHH
RFRGVDGSHGRAVAALRHLAGAGIATSISTVICRINHTAIDDLVTFAREQGVGQLNFHNF
HHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHEECCCHHHHHHHHHHHHCCCCEEECCCE
KCSGLGLSHRDELDLSPAEWREFYRGALAARERESGLDVSLDDPIIALLGARDAGSLVKG
EECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEECCCCEEEEEECCCCCCHHCC
SVCGKLSLNIKTNGDMTPCGFIPVVIGNIVRDDLKQVWRDSAVLAALRTKKPTGKCAGCS
CCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
AYEDCLGGCSARALALTGDLNSPDPHCWA
HHHHHHCCCCCCEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11111029 [H]