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The map label for this gene is bchE [H]

Identifier: 39997979

GI number: 39997979

Start: 3173653

End: 3175164

Strand: Reverse

Name: bchE [H]

Synonym: GSU2888

Alternate gene names: 39997979

Gene position: 3175164-3173653 (Counterclockwise)

Preceding gene: 39997980

Following gene: 39997978

Centisome position: 83.25

GC content: 61.9

Gene sequence:

>1512_bases
ATGAAAAAAATAAAGCGTGTGGCGCTCATCACGCCCCCCTATCACTCGGGGGTCGTGGAATCAGCCGGCACCTGGCTTAA
TGTCGGATTTGTCTACATCGCCGGGTCTCTCAGGGCAGCGGGGTATGAGGTCGATTACTATGATGCCATGTCCCTGTGGC
ACACGTGGCCCGACATCAGGAGGCGGATCGAGGCGTTCCGCCCCGACGTGGTGGCCACCACCGCCTTCACCGCGTCCATC
GTCGACGCGATCAGGCTGCTGCGCTTCGCCAAGGAGATCGATCCCGGCATCGTGACCGTGCTCGGCAATGTGCACGCCAC
CTTCTGCTACGACGAGATCCTCGCCCATGACCACGACGCCGTCGACTTCATCGTCCGGGGCGAGGGTGAAGTAACGCTGC
CCCGGCTCTGTACCTGCCTCAATGCCGGAGACGATCCGTACAAGGTGGAAGGGCTCGCCTTCCGGCGGGACGGCGGCGTG
GTGGTAACGCCGCGGGCGCCGTACATTCACGACCTTGACGGGCTCCCCATGGCCTGGGATCTGGTGGAATGGCCCATTTA
CACCTACCGGGCAAAGAACGACGCCCGGCTCGCCATCGTCTCCTCGTCCCGGGGGTGCAAGCAGCAGTGCTCCTTTTGTT
CCCAGCAGCTCTTCTGGTCACAGTCGTGGCGGGCCCGCTCCGCCGAGAACTTCGTGGCGGAGCTTGAGATGCTCCACACC
GTGCACGGCGTCCAGGTGGCCATGCTTTCGGACGAGATTCCCACCTTTGACCGGCAGCGATGGGTCCGCATCCTGGACCT
GATGATCGAGCGGCAGGTTCCGGTCAAGCTCCTCATGGAAACGAGGGTGGACGACATCCTGCGTGATGCGGACATTATGG
ACAGGTACCGGGAAGGGGGCGTCGAGCATATCTACGTGGGGGTGGAGGCCGGCACCCAGGAGACCCTGGACCTTTTCAAG
AAGGACACCCAGGTGGAGCAGTCCAAGCAGGCTATCGACCTGATCAACAACGCCGACATCGTCTCGGAAACCTCCTTCGT
GCTCGGCATGCCCGACGATACGCCGGAATCCATTGCCCAGACCATTGAGCTGGCCAAGCACTACAATCCTGACATGGCCT
TTTTCCTGGCCATAGCGCCCTGGCCCTACGCCGAGCTCTATCCCCAACTGGAGGAGTACGTGGCCACCAAGGACTACCGC
AAGTACAACCTGGTGGAGCCGGTCATCAAGCCGAAGCACATGACCCTGGAAGAGCTGGAGCGCCAACTCGGCAAGGCGTC
CCAGCAGTTTTTCATGCACAAATTCCAGAATCTGCACCAGCTATCGGCATGGAAGCAGGAATTCATGCTCTCGGTACTGG
ATCTCCTCATCAATCATTCCTACCTGGCCGGCCAGATGCGGGCCATGCTCAAGGAGGGAAAGGAGATGCCGGCCGAGGTA
AAGGCGCTGCTGCGCGCGGTCGGCGAGCGCACGGGCGCAGCCCATCCCCACGCGGTGGCGCCGATCCCCTGA

Upstream 100 bases:

>100_bases
GAGGAATGTGGGATTTTTGAATTTTTATTAAACGCGGTCCATTTTTTGCTTTAGGCAACCCGTTGCGGTTTCCGCCTGTT
ATGGAATAGAGGAGCTATTG

Downstream 100 bases:

>100_bases
TCGTCCCCGCCACTGTTCCCCCGGACACGGCTTTTCACGGCCCGGTCTTATCGCGAAGATGACCGGGCCGTTGTGTTTTC
TTTGCGCACGGCAACCATAA

Product: B12 binding /radical SAM protein

Products: NA

Alternate protein names: Anaerobic Mg-protoporphyrin IX monomethyl ester oxidative cyclase [H]

Number of amino acids: Translated: 503; Mature: 503

Protein sequence:

>503_residues
MKKIKRVALITPPYHSGVVESAGTWLNVGFVYIAGSLRAAGYEVDYYDAMSLWHTWPDIRRRIEAFRPDVVATTAFTASI
VDAIRLLRFAKEIDPGIVTVLGNVHATFCYDEILAHDHDAVDFIVRGEGEVTLPRLCTCLNAGDDPYKVEGLAFRRDGGV
VVTPRAPYIHDLDGLPMAWDLVEWPIYTYRAKNDARLAIVSSSRGCKQQCSFCSQQLFWSQSWRARSAENFVAELEMLHT
VHGVQVAMLSDEIPTFDRQRWVRILDLMIERQVPVKLLMETRVDDILRDADIMDRYREGGVEHIYVGVEAGTQETLDLFK
KDTQVEQSKQAIDLINNADIVSETSFVLGMPDDTPESIAQTIELAKHYNPDMAFFLAIAPWPYAELYPQLEEYVATKDYR
KYNLVEPVIKPKHMTLEELERQLGKASQQFFMHKFQNLHQLSAWKQEFMLSVLDLLINHSYLAGQMRAMLKEGKEMPAEV
KALLRAVGERTGAAHPHAVAPIP

Sequences:

>Translated_503_residues
MKKIKRVALITPPYHSGVVESAGTWLNVGFVYIAGSLRAAGYEVDYYDAMSLWHTWPDIRRRIEAFRPDVVATTAFTASI
VDAIRLLRFAKEIDPGIVTVLGNVHATFCYDEILAHDHDAVDFIVRGEGEVTLPRLCTCLNAGDDPYKVEGLAFRRDGGV
VVTPRAPYIHDLDGLPMAWDLVEWPIYTYRAKNDARLAIVSSSRGCKQQCSFCSQQLFWSQSWRARSAENFVAELEMLHT
VHGVQVAMLSDEIPTFDRQRWVRILDLMIERQVPVKLLMETRVDDILRDADIMDRYREGGVEHIYVGVEAGTQETLDLFK
KDTQVEQSKQAIDLINNADIVSETSFVLGMPDDTPESIAQTIELAKHYNPDMAFFLAIAPWPYAELYPQLEEYVATKDYR
KYNLVEPVIKPKHMTLEELERQLGKASQQFFMHKFQNLHQLSAWKQEFMLSVLDLLINHSYLAGQMRAMLKEGKEMPAEV
KALLRAVGERTGAAHPHAVAPIP
>Mature_503_residues
MKKIKRVALITPPYHSGVVESAGTWLNVGFVYIAGSLRAAGYEVDYYDAMSLWHTWPDIRRRIEAFRPDVVATTAFTASI
VDAIRLLRFAKEIDPGIVTVLGNVHATFCYDEILAHDHDAVDFIVRGEGEVTLPRLCTCLNAGDDPYKVEGLAFRRDGGV
VVTPRAPYIHDLDGLPMAWDLVEWPIYTYRAKNDARLAIVSSSRGCKQQCSFCSQQLFWSQSWRARSAENFVAELEMLHT
VHGVQVAMLSDEIPTFDRQRWVRILDLMIERQVPVKLLMETRVDDILRDADIMDRYREGGVEHIYVGVEAGTQETLDLFK
KDTQVEQSKQAIDLINNADIVSETSFVLGMPDDTPESIAQTIELAKHYNPDMAFFLAIAPWPYAELYPQLEEYVATKDYR
KYNLVEPVIKPKHMTLEELERQLGKASQQFFMHKFQNLHQLSAWKQEFMLSVLDLLINHSYLAGQMRAMLKEGKEMPAEV
KALLRAVGERTGAAHPHAVAPIP

Specific function: Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis in anaerobic conditions. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-prot

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 B12-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011772
- InterPro:   IPR006158
- InterPro:   IPR006638
- InterPro:   IPR005839
- InterPro:   IPR007197 [H]

Pfam domain/function: PF02310 B12-binding; PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 57158; Mature: 57158

Theoretical pI: Translated: 5.59; Mature: 5.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIKRVALITPPYHSGVVESAGTWLNVGFVYIAGSLRAAGYEVDYYDAMSLWHTWPDIR
CCCCCEEEEECCCCCCCCHHCCCCEEEEEEEEEECCHHHCCCCCCHHHHHHHHHCCHHHH
RRIEAFRPDVVATTAFTASIVDAIRLLRFAKEIDPGIVTVLGNVHATFCYDEILAHDHDA
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHCCCCC
VDFIVRGEGEVTLPRLCTCLNAGDDPYKVEGLAFRRDGGVVVTPRAPYIHDLDGLPMAWD
EEEEEECCCCEEHHHHHHHHCCCCCCEEECEEEEEECCCEEECCCCCCCCCCCCCCCCHH
LVEWPIYTYRAKNDARLAIVSSSRGCKQQCSFCSQQLFWSQSWRARSAENFVAELEMLHT
HHHCCEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
VHGVQVAMLSDEIPTFDRQRWVRILDLMIERQVPVKLLMETRVDDILRDADIMDRYREGG
HHCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
VEHIYVGVEAGTQETLDLFKKDTQVEQSKQAIDLINNADIVSETSFVLGMPDDTPESIAQ
CEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCEEEECCCCCHHHHHH
TIELAKHYNPDMAFFLAIAPWPYAELYPQLEEYVATKDYRKYNLVEPVIKPKHMTLEELE
HHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHH
RQLGKASQQFFMHKFQNLHQLSAWKQEFMLSVLDLLINHSYLAGQMRAMLKEGKEMPAEV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHH
KALLRAVGERTGAAHPHAVAPIP
HHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MKKIKRVALITPPYHSGVVESAGTWLNVGFVYIAGSLRAAGYEVDYYDAMSLWHTWPDIR
CCCCCEEEEECCCCCCCCHHCCCCEEEEEEEEEECCHHHCCCCCCHHHHHHHHHCCHHHH
RRIEAFRPDVVATTAFTASIVDAIRLLRFAKEIDPGIVTVLGNVHATFCYDEILAHDHDA
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHCCCCC
VDFIVRGEGEVTLPRLCTCLNAGDDPYKVEGLAFRRDGGVVVTPRAPYIHDLDGLPMAWD
EEEEEECCCCEEHHHHHHHHCCCCCCEEECEEEEEECCCEEECCCCCCCCCCCCCCCCHH
LVEWPIYTYRAKNDARLAIVSSSRGCKQQCSFCSQQLFWSQSWRARSAENFVAELEMLHT
HHHCCEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
VHGVQVAMLSDEIPTFDRQRWVRILDLMIERQVPVKLLMETRVDDILRDADIMDRYREGG
HHCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
VEHIYVGVEAGTQETLDLFKKDTQVEQSKQAIDLINNADIVSETSFVLGMPDDTPESIAQ
CEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCEEEECCCCCHHHHHH
TIELAKHYNPDMAFFLAIAPWPYAELYPQLEEYVATKDYRKYNLVEPVIKPKHMTLEELE
HHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHH
RQLGKASQQFFMHKFQNLHQLSAWKQEFMLSVLDLLINHSYLAGQMRAMLKEGKEMPAEV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHH
KALLRAVGERTGAAHPHAVAPIP
HHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA