Click here to switch to the map view.

The map label for this gene is perR [H]

Identifier: 39997902

GI number: 39997902

Start: 3088861

End: 3089319

Strand: Direct

Name: perR [H]

Synonym: GSU2809

Alternate gene names: 39997902

Gene position: 3088861-3089319 (Clockwise)

Preceding gene: 39997901

Following gene: 39997903

Centisome position: 80.98

GC content: 56.64

Gene sequence:

>459_bases
ATGCCGAAATCAAACATACTTACCACAGGACAAGAGGACGCCTTTGAAAAGGCATGCAGAGATGCCGGGTTGCGGCTCAC
CCATCAGCGCCTGGAGATCTACCGTCAACTGGCCACCTCTACTGACCATCCGTCGGCGGAGACGCTCCATCAACGGTTGC
GCCGGGACAACCCCACCCTCTCCCTTGATACGGTCTACCGGACCCTGGCGGTCTTCGCGCACCACGGTATAATCAATAAA
GTCGAGACGGTCGAAAGCCAGTCGCGATTCGAGGCGAAACGCATGCGGCATCACCACCTGATCTGCAGCAGATGCAAGGA
AATAATCGATTTCCAGTGGCACCACATCGACGAGGCCCCCCTGCCCGAAGAGACCAGAACCTGGGGGCGGATCGACAACA
AGAACGTCGTGATATACGGCGTGTGCAACAAGTGCCTTGAGGCGAAAAAGGCATCGTAA

Upstream 100 bases:

>100_bases
CCATTTTTGGAAAAAATTCACCCAAGGCTTGACTCACCCCCAGTTGTTAGGTATTTTTCTTACATGGAATCATTAGTCAA
CAAGCGGACGGTCATGTGCC

Downstream 100 bases:

>100_bases
CTTTTTTGTGCCCAGCCACTAGTAATTATTCTTACCTGATAATTATTACAGCCAGGCTTCCACCTCCCTTCCATGCCCAT
AAACCGACTGATTGCGAGGC

Product: FUR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 152; Mature: 151

Protein sequence:

>152_residues
MPKSNILTTGQEDAFEKACRDAGLRLTHQRLEIYRQLATSTDHPSAETLHQRLRRDNPTLSLDTVYRTLAVFAHHGIINK
VETVESQSRFEAKRMRHHHLICSRCKEIIDFQWHHIDEAPLPEETRTWGRIDNKNVVIYGVCNKCLEAKKAS

Sequences:

>Translated_152_residues
MPKSNILTTGQEDAFEKACRDAGLRLTHQRLEIYRQLATSTDHPSAETLHQRLRRDNPTLSLDTVYRTLAVFAHHGIINK
VETVESQSRFEAKRMRHHHLICSRCKEIIDFQWHHIDEAPLPEETRTWGRIDNKNVVIYGVCNKCLEAKKAS
>Mature_151_residues
PKSNILTTGQEDAFEKACRDAGLRLTHQRLEIYRQLATSTDHPSAETLHQRLRRDNPTLSLDTVYRTLAVFAHHGIINKV
ETVESQSRFEAKRMRHHHLICSRCKEIIDFQWHHIDEAPLPEETRTWGRIDNKNVVIYGVCNKCLEAKKAS

Specific function: Manganese-dependent repressor that controls a regulon of oxidative stress resistance and iron-storage proteins. May act as a hydrogen peroxide and organic hydroperoxide sensor [H]

COG id: COG0735

COG function: function code P; Fe2+/Zn2+ uptake regulation proteins

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Fur family [H]

Homologues:

Organism=Escherichia coli, GI1786899, Length=127, Percent_Identity=33.8582677165354, Blast_Score=63, Evalue=8e-12,

Paralogues:

None

Copy number: 3432 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002481 [H]

Pfam domain/function: PF01475 FUR [H]

EC number: NA

Molecular weight: Translated: 17641; Mature: 17510

Theoretical pI: Translated: 8.51; Mature: 8.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKSNILTTGQEDAFEKACRDAGLRLTHQRLEIYRQLATSTDHPSAETLHQRLRRDNPTL
CCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCC
SLDTVYRTLAVFAHHGIINKVETVESQSRFEAKRMRHHHLICSRCKEIIDFQWHHIDEAP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
LPEETRTWGRIDNKNVVIYGVCNKCLEAKKAS
CCHHHHHHCCCCCCCEEEEHHHHHHHHHCCCC
>Mature Secondary Structure 
PKSNILTTGQEDAFEKACRDAGLRLTHQRLEIYRQLATSTDHPSAETLHQRLRRDNPTL
CCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCC
SLDTVYRTLAVFAHHGIINKVETVESQSRFEAKRMRHHHLICSRCKEIIDFQWHHIDEAP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
LPEETRTWGRIDNKNVVIYGVCNKCLEAKKAS
CCHHHHHHCCCCCCCEEEEHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA