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The map label for this gene is yggA [C]

Identifier: 39997870

GI number: 39997870

Start: 3057126

End: 3057764

Strand: Direct

Name: yggA [C]

Synonym: GSU2777

Alternate gene names: 39997870

Gene position: 3057126-3057764 (Clockwise)

Preceding gene: 39997861

Following gene: 39997871

Centisome position: 80.15

GC content: 69.01

Gene sequence:

>639_bases
ATGCCGAGCCAGCTTGCCATTGCGCCGTTTCTGAGCGGCTTCGGCCTCGGGGCCGGACTGATCATCGCCATCGGGAGCCA
GAATGCCTTTGTGCTGCGCCAGGGGCTCAAGCGGGAGCACGTCTTCACGGTGTGCACGGTCTGCTTCCTCTGCGACGCGG
TGCTGATCGGGCTGGGGGCGGGGGGCTTCGGCACGCTGGTGGGGTCGTCGCCGCGGCTCATGGGGCTCACCCTGTGGGGC
GGGGCGGCCTTTCTCTTTGCCTACGGGCTCCGCTCGTTCCACGCGGCCCTGCGGCCGGGGAAGCTGGAGGCGGCCGACGA
CGGCGGCAGCCTGGACGGGCTTGCCAAGGTGGTCCTGACCACCCTGGCCCTGAGCCTCCTCAATCCCCATGTCTACCTGG
ATACGGTCCTGCTGCTGGGGAGCCTGGCGGGGCAGTTCGCGGGACGGTCCCGGCTCCTCTTCGCCCTGGGGGCCATGGGA
GCTTCGTTGGCCTGGTTCTACGGGATCGGTTACGGGGCCAGGGTGCTGACGCCGCTCTTCCGCAAGCCCGCGGCCTGGCG
GGCGCTGGACCTTGTGGTGGGCTGCACCATGTGGGGGATTGCGGCGAACCTGATCTGGTCTGATCTGACAGGAGGATGA

Upstream 100 bases:

>100_bases
AACAGGGACATGAAGAAAAATGCCCCACCGTCACGGAGGTGTGTCTTGCGTCCGGGTCTGCGGTCGGCTATAACAGGGGC
GAGAGGGGGGACGCCACACC

Downstream 100 bases:

>100_bases
ACGGGATGTTCGGGATCGCGTGATATTTTCACCTTGACCCGTCTATCGGTTCACGGTTTAGCGTTATCTCCGTCACGGCC
ATGACAGACCTTCAACGCTG

Product: transporter, LysE family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 211

Protein sequence:

>212_residues
MPSQLAIAPFLSGFGLGAGLIIAIGSQNAFVLRQGLKREHVFTVCTVCFLCDAVLIGLGAGGFGTLVGSSPRLMGLTLWG
GAAFLFAYGLRSFHAALRPGKLEAADDGGSLDGLAKVVLTTLALSLLNPHVYLDTVLLLGSLAGQFAGRSRLLFALGAMG
ASLAWFYGIGYGARVLTPLFRKPAAWRALDLVVGCTMWGIAANLIWSDLTGG

Sequences:

>Translated_212_residues
MPSQLAIAPFLSGFGLGAGLIIAIGSQNAFVLRQGLKREHVFTVCTVCFLCDAVLIGLGAGGFGTLVGSSPRLMGLTLWG
GAAFLFAYGLRSFHAALRPGKLEAADDGGSLDGLAKVVLTTLALSLLNPHVYLDTVLLLGSLAGQFAGRSRLLFALGAMG
ASLAWFYGIGYGARVLTPLFRKPAAWRALDLVVGCTMWGIAANLIWSDLTGG
>Mature_211_residues
PSQLAIAPFLSGFGLGAGLIIAIGSQNAFVLRQGLKREHVFTVCTVCFLCDAVLIGLGAGGFGTLVGSSPRLMGLTLWGG
AAFLFAYGLRSFHAALRPGKLEAADDGGSLDGLAKVVLTTLALSLLNPHVYLDTVLLLGSLAGQFAGRSRLLFALGAMGA
SLAWFYGIGYGARVLTPLFRKPAAWRALDLVVGCTMWGIAANLIWSDLTGG

Specific function: Unknown

COG id: COG1279

COG function: function code R; Lysine efflux permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LysE/ArgO transporter (TC 2.A.75) family [H]

Homologues:

Organism=Escherichia coli, GI1789290, Length=195, Percent_Identity=42.5641025641026, Blast_Score=146, Evalue=8e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004777
- InterPro:   IPR001123 [H]

Pfam domain/function: PF01810 LysE [H]

EC number: NA

Molecular weight: Translated: 22016; Mature: 21885

Theoretical pI: Translated: 9.32; Mature: 9.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSQLAIAPFLSGFGLGAGLIIAIGSQNAFVLRQGLKREHVFTVCTVCFLCDAVLIGLGA
CCCCHHHHHHHHHCCCCCEEEEEECCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCC
GGFGTLVGSSPRLMGLTLWGGAAFLFAYGLRSFHAALRPGKLEAADDGGSLDGLAKVVLT
CCHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH
TLALSLLNPHVYLDTVLLLGSLAGQFAGRSRLLFALGAMGASLAWFYGIGYGARVLTPLF
HHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
RKPAAWRALDLVVGCTMWGIAANLIWSDLTGG
HCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
PSQLAIAPFLSGFGLGAGLIIAIGSQNAFVLRQGLKREHVFTVCTVCFLCDAVLIGLGA
CCCHHHHHHHHHCCCCCEEEEEECCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCC
GGFGTLVGSSPRLMGLTLWGGAAFLFAYGLRSFHAALRPGKLEAADDGGSLDGLAKVVLT
CCHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH
TLALSLLNPHVYLDTVLLLGSLAGQFAGRSRLLFALGAMGASLAWFYGIGYGARVLTPLF
HHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
RKPAAWRALDLVVGCTMWGIAANLIWSDLTGG
HCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]