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The map label for this gene is 39997859

Identifier: 39997859

GI number: 39997859

Start: 3045657

End: 3046247

Strand: Reverse

Name: 39997859

Synonym: GSU2766

Alternate gene names: NA

Gene position: 3046247-3045657 (Counterclockwise)

Preceding gene: 39997860

Following gene: 39997858

Centisome position: 79.87

GC content: 67.01

Gene sequence:

>591_bases
ATGAAACGCATCTGCGTGTTTTGCGGTTCCAGCCCCGGCGCGCGGCCGGCTTATGCCGGGGCGGCGCGGGAGCTCGGGCG
GCTGCTGGCGGCAACGGGAATCGATCTGGTCTACGGCGGGGCGAGCGTCGGCCTGATGGGGATTCTGGCCCGGACCGTGC
TCGATGGCGGCGGCCGGGTGACCGGCGTCATCCCCCGGATGCTGGAGGAGAAGGAGATCGCCCTGACCAGGCTGAGCGAT
CTCCGGGTGGTGGAGTCCATGCATGAGCGCAAGGCCCTCATGGCGGAGCTGTCGGACGGATTCATCGCCCTGCCCGGCGG
GATCGGCACTATCGAGGAGTTCGTTGAGGTGCTCACGTGGCTGCAGTTGGGCATCCACGGCAAGCCGTGCGGCCTGCTGA
ACAGCGACGGCTATTACGACCGCCTGCTGGACTTTTTCGACCACATGGCCGCGGAAGGGTTCATCCGGCCGGAATGCCGC
GAAGCCGTGCTGGTGGACCGGGACCCGGCGGCGTTGCTGAAGAAGATGAGTCTCTACCGCGCGCCCGTCCCGGACAAGGT
GGAGTGGGCGCTGAAGATGGATAACGCGTGA

Upstream 100 bases:

>100_bases
GGACATCCGGCGGGCGAGGGCGGCGACGAGGCCGTAACAATCACTCACGCTCCAGCCCACATCTGTGTGACGGTGGGCGG
TGCCGGCAAAGGAAAGAGAC

Downstream 100 bases:

>100_bases
ATGTGGAGCGGATCGTGCCGGGCCACGGCCGCTGTCCACCAAGAAGGACCTGCGGGAAATGAAGGAATATCTCCTGCTCT
TCGACGCCCGGGCGTGCGAG

Product: decarboxylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 196; Mature: 196

Protein sequence:

>196_residues
MKRICVFCGSSPGARPAYAGAARELGRLLAATGIDLVYGGASVGLMGILARTVLDGGGRVTGVIPRMLEEKEIALTRLSD
LRVVESMHERKALMAELSDGFIALPGGIGTIEEFVEVLTWLQLGIHGKPCGLLNSDGYYDRLLDFFDHMAAEGFIRPECR
EAVLVDRDPAALLKKMSLYRAPVPDKVEWALKMDNA

Sequences:

>Translated_196_residues
MKRICVFCGSSPGARPAYAGAARELGRLLAATGIDLVYGGASVGLMGILARTVLDGGGRVTGVIPRMLEEKEIALTRLSD
LRVVESMHERKALMAELSDGFIALPGGIGTIEEFVEVLTWLQLGIHGKPCGLLNSDGYYDRLLDFFDHMAAEGFIRPECR
EAVLVDRDPAALLKKMSLYRAPVPDKVEWALKMDNA
>Mature_196_residues
MKRICVFCGSSPGARPAYAGAARELGRLLAATGIDLVYGGASVGLMGILARTVLDGGGRVTGVIPRMLEEKEIALTRLSD
LRVVESMHERKALMAELSDGFIALPGGIGTIEEFVEVLTWLQLGIHGKPCGLLNSDGYYDRLLDFFDHMAAEGFIRPECR
EAVLVDRDPAALLKKMSLYRAPVPDKVEWALKMDNA

Specific function: Unknown

COG id: COG1611

COG function: function code R; Predicted Rossmann fold nucleotide-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LOG family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6322406, Length=207, Percent_Identity=41.0628019323672, Blast_Score=156, Evalue=2e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005269 [H]

Pfam domain/function: PF03641 Lysine_decarbox [H]

EC number: NA

Molecular weight: Translated: 21263; Mature: 21263

Theoretical pI: Translated: 5.76; Mature: 5.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRICVFCGSSPGARPAYAGAARELGRLLAATGIDLVYGGASVGLMGILARTVLDGGGRV
CCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCHHEECCHHHHHHHHHHHHHHCCCCCE
TGVIPRMLEEKEIALTRLSDLRVVESMHERKALMAELSDGFIALPGGIGTIEEFVEVLTW
EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHH
LQLGIHGKPCGLLNSDGYYDRLLDFFDHMAAEGFIRPECREAVLVDRDPAALLKKMSLYR
HHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHEECCCCHHHHHHHHHHHC
APVPDKVEWALKMDNA
CCCCCCCEEEEEECCC
>Mature Secondary Structure
MKRICVFCGSSPGARPAYAGAARELGRLLAATGIDLVYGGASVGLMGILARTVLDGGGRV
CCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCHHEECCHHHHHHHHHHHHHHCCCCCE
TGVIPRMLEEKEIALTRLSDLRVVESMHERKALMAELSDGFIALPGGIGTIEEFVEVLTW
EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHH
LQLGIHGKPCGLLNSDGYYDRLLDFFDHMAAEGFIRPECREAVLVDRDPAALLKKMSLYR
HHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHEECCCCHHHHHHHHHHHC
APVPDKVEWALKMDNA
CCCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043; 2116366 [H]