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The map label for this gene is glpD [H]

Identifier: 39997854

GI number: 39997854

Start: 3041518

End: 3043071

Strand: Reverse

Name: glpD [H]

Synonym: GSU2761

Alternate gene names: 39997854

Gene position: 3043071-3041518 (Counterclockwise)

Preceding gene: 39997855

Following gene: 39997853

Centisome position: 79.78

GC content: 71.69

Gene sequence:

>1554_bases
ATGAAGCGCGAGGATCTGCTGCGGCATCTGGCCGAAACCGAGGTCTGGGACATGATCGTGATCGGCGGGGGCGCCACGGG
CCTCGGCACGGCGGTGGAGGCGGCCGGCCGCGGCTACCGGACCCTTCTCCTGGAACAGGGGGACTTTGCCCAGGGGACGT
CCAGCCGGAGCACCAAGCTGATCCACGGCGGGGTCCGCTACCTGCAGCAGGGAAACCTGACGCTGGTGCTGGAGGCGCTG
CGGGAGCGGGGCCTGCTCATCCGCAACGCACCGCACCTGGTCCACAACCTTTCCTTTGTGGTGCCGCTCTACGACTGGTG
GGAAGGGCCCTTCTACGGGATCGGGCTCAAGCTGTACGACGTCCTGGCCGGCAAGCTGGGGCTGGGGCCGTCCCGCCTGC
TGTCGCGGGAAGAGACCCTGGGCCACATCCCGACCGTGGAGCCCCACGGCCTGCGCGGCGGGGTGATCTACCACGACGGC
CAGTTCGACGACTCCCGCCTCGCGATCAGCCTGGCCCTGACCCTGGCCGACCTGGGCGGGGTGGCGCTCAATCACTTCCC
GGTGACCGGCATCATCAGCCGCGACGGTCTCGTGGCCGGGGTGGAGGCGCGGGACCGGGAGACCGGCGGCGCCTTCAGGA
TCATGGGGCGGGCGGTGATCAATGCCGCCGGACCTTTCGTGGACGGGGTGCGGCGGCTGGCCGACCCGGCGGCCCGGGAC
CTCATCGCCCCGAGCCAGGGGGTGCACCTGGTGCTGGACGGCTCGTTTCTGCCCGGCGACAGCGCGATCATGGTTCCCCA
CACCGACGACGGTCGCGTCCTGTTCGCGGTCCCCTGGCACGGCCGGACCGTGGTGGGCACCACCGATACGCCCATCCCGG
CGGCCGGGCTGGAGCCGCGCCCGCTGCCGGAAGAGATCGACTTTCTCCTGTCCCATGCGGCCCGCTACCTGACCCGGCAT
CCCGAGCGCCGGGACGTGCTGAGCACCTTCGCCGGCATCCGGCCCCTGGTCCGCAGCGACAGCGGCGGCGACACCGCCTC
CCTTTCCCGGGACCACACCCTGCTGGTGGAGGGAAGCGGCCTGGTCACCATTGCCGGCGGCAAGTGGACCACCTACCGGA
AGATGGGGGAGGACACGGTTACCGCCGCTGCCCAGGTGGCCGGCCTGGACCATCGGCCGTCGGTCACGGAGACGTTGCGT
ATCCACGGCTGGCAGGAGGATGCGACGGAGGGACCGCTGCAGGTCTACGGCAGCGATGCCGCAGCCCTGGAGCAACTCCT
GCGGGAAAACGCCGCCTGGCGTGAGCCCCTGCACCCGGCGCTCCCCTACTGCGCCGGGGAGGTCGTCTGGGGGGTGCGTC
ACGAGTGGGCCCGCACGGTGGAGGATGTCCTGGCCCGCCGCACCAGGGCGCTGCTGCTGGATGCCCGTGCCGCCGTGGCC
GCGGCGCCGCGGGTGGCGGAACTGATGGCGCGGGAGCTGGGACGGGACAGCGACTGGCAGGCGGCGCAGGTTGCCGCGTT
TACCCATCTGGCCCGGGGCTACCTGCCGGAGTGA

Upstream 100 bases:

>100_bases
CGGAGCACACCTTTGAGCCGGCCATGGACCGGGACAGGGCGGCGGAGCTGCGCTCCACCTGGAGCAGGGCCCTGGAAAGG
TCCCAGGGGTGGGCGCAGCC

Downstream 100 bases:

>100_bases
GAAATCTTTTCACGAACCGGGAGCGGAGTTTTCGCGCCGGCGCGGTAGATGTAGTCTATCCGTGCCGGATGCCACCCCGC
TTCGCTCCGCGTGCCTCTCG

Product: FAD-dependent glycerol-3-phosphate dehydrogenase subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 517; Mature: 517

Protein sequence:

>517_residues
MKREDLLRHLAETEVWDMIVIGGGATGLGTAVEAAGRGYRTLLLEQGDFAQGTSSRSTKLIHGGVRYLQQGNLTLVLEAL
RERGLLIRNAPHLVHNLSFVVPLYDWWEGPFYGIGLKLYDVLAGKLGLGPSRLLSREETLGHIPTVEPHGLRGGVIYHDG
QFDDSRLAISLALTLADLGGVALNHFPVTGIISRDGLVAGVEARDRETGGAFRIMGRAVINAAGPFVDGVRRLADPAARD
LIAPSQGVHLVLDGSFLPGDSAIMVPHTDDGRVLFAVPWHGRTVVGTTDTPIPAAGLEPRPLPEEIDFLLSHAARYLTRH
PERRDVLSTFAGIRPLVRSDSGGDTASLSRDHTLLVEGSGLVTIAGGKWTTYRKMGEDTVTAAAQVAGLDHRPSVTETLR
IHGWQEDATEGPLQVYGSDAAALEQLLRENAAWREPLHPALPYCAGEVVWGVRHEWARTVEDVLARRTRALLLDARAAVA
AAPRVAELMARELGRDSDWQAAQVAAFTHLARGYLPE

Sequences:

>Translated_517_residues
MKREDLLRHLAETEVWDMIVIGGGATGLGTAVEAAGRGYRTLLLEQGDFAQGTSSRSTKLIHGGVRYLQQGNLTLVLEAL
RERGLLIRNAPHLVHNLSFVVPLYDWWEGPFYGIGLKLYDVLAGKLGLGPSRLLSREETLGHIPTVEPHGLRGGVIYHDG
QFDDSRLAISLALTLADLGGVALNHFPVTGIISRDGLVAGVEARDRETGGAFRIMGRAVINAAGPFVDGVRRLADPAARD
LIAPSQGVHLVLDGSFLPGDSAIMVPHTDDGRVLFAVPWHGRTVVGTTDTPIPAAGLEPRPLPEEIDFLLSHAARYLTRH
PERRDVLSTFAGIRPLVRSDSGGDTASLSRDHTLLVEGSGLVTIAGGKWTTYRKMGEDTVTAAAQVAGLDHRPSVTETLR
IHGWQEDATEGPLQVYGSDAAALEQLLRENAAWREPLHPALPYCAGEVVWGVRHEWARTVEDVLARRTRALLLDARAAVA
AAPRVAELMARELGRDSDWQAAQVAAFTHLARGYLPE
>Mature_517_residues
MKREDLLRHLAETEVWDMIVIGGGATGLGTAVEAAGRGYRTLLLEQGDFAQGTSSRSTKLIHGGVRYLQQGNLTLVLEAL
RERGLLIRNAPHLVHNLSFVVPLYDWWEGPFYGIGLKLYDVLAGKLGLGPSRLLSREETLGHIPTVEPHGLRGGVIYHDG
QFDDSRLAISLALTLADLGGVALNHFPVTGIISRDGLVAGVEARDRETGGAFRIMGRAVINAAGPFVDGVRRLADPAARD
LIAPSQGVHLVLDGSFLPGDSAIMVPHTDDGRVLFAVPWHGRTVVGTTDTPIPAAGLEPRPLPEEIDFLLSHAARYLTRH
PERRDVLSTFAGIRPLVRSDSGGDTASLSRDHTLLVEGSGLVTIAGGKWTTYRKMGEDTVTAAAQVAGLDHRPSVTETLR
IHGWQEDATEGPLQVYGSDAAALEQLLRENAAWREPLHPALPYCAGEVVWGVRHEWARTVEDVLARRTRALLLDARAAVA
AAPRVAELMARELGRDSDWQAAQVAAFTHLARGYLPE

Specific function: Conversion Of Glycerol 3-Phosphate To Dihydroxyacetone. Uses Molecular Oxygen Or Nitrate As Electron Acceptor. [C]

COG id: COG0578

COG function: function code C; Glycerol-3-phosphate dehydrogenase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI285002233, Length=551, Percent_Identity=40.1088929219601, Blast_Score=385, Evalue=1e-107,
Organism=Homo sapiens, GI285002231, Length=551, Percent_Identity=40.1088929219601, Blast_Score=385, Evalue=1e-107,
Organism=Escherichia coli, GI2367226, Length=458, Percent_Identity=31.0043668122271, Blast_Score=158, Evalue=6e-40,
Organism=Escherichia coli, GI1788574, Length=509, Percent_Identity=27.8978388998035, Blast_Score=111, Evalue=9e-26,
Organism=Caenorhabditis elegans, GI17509253, Length=546, Percent_Identity=40.1098901098901, Blast_Score=349, Evalue=2e-96,
Organism=Caenorhabditis elegans, GI115534726, Length=525, Percent_Identity=37.3333333333333, Blast_Score=328, Evalue=4e-90,
Organism=Saccharomyces cerevisiae, GI6322036, Length=591, Percent_Identity=35.1945854483926, Blast_Score=334, Evalue=2e-92,
Organism=Drosophila melanogaster, GI161077125, Length=546, Percent_Identity=38.8278388278388, Blast_Score=369, Evalue=1e-102,
Organism=Drosophila melanogaster, GI24653942, Length=546, Percent_Identity=38.8278388278388, Blast_Score=369, Evalue=1e-102,
Organism=Drosophila melanogaster, GI24653944, Length=546, Percent_Identity=38.8278388278388, Blast_Score=369, Evalue=1e-102,
Organism=Drosophila melanogaster, GI20130025, Length=546, Percent_Identity=38.8278388278388, Blast_Score=369, Evalue=1e-102,
Organism=Drosophila melanogaster, GI24586295, Length=554, Percent_Identity=33.2129963898917, Blast_Score=268, Evalue=8e-72,
Organism=Drosophila melanogaster, GI19921278, Length=536, Percent_Identity=32.6492537313433, Blast_Score=254, Evalue=7e-68,
Organism=Drosophila melanogaster, GI45550977, Length=399, Percent_Identity=30.5764411027569, Blast_Score=177, Evalue=2e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006076
- InterPro:   IPR000447 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: =1.1.5.3 [H]

Molecular weight: Translated: 55885; Mature: 55885

Theoretical pI: Translated: 6.38; Mature: 6.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKREDLLRHLAETEVWDMIVIGGGATGLGTAVEAAGRGYRTLLLEQGDFAQGTSSRSTKL
CCHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCHH
IHGGVRYLQQGNLTLVLEALRERGLLIRNAPHLVHNLSFVVPLYDWWEGPFYGIGLKLYD
HHHHHHHHHCCCHHHHHHHHHHCCCEEECCCHHHHCCEEEEEHHHHCCCCEEECHHHHHH
VLAGKLGLGPSRLLSREETLGHIPTVEPHGLRGGVIYHDGQFDDSRLAISLALTLADLGG
HHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEEEEHHHHHCC
VALNHFPVTGIISRDGLVAGVEARDRETGGAFRIMGRAVINAAGPFVDGVRRLADPAARD
CEEECCCEEEEEECCCEEECCCCCCCCCCCCEEEHHHHHHHHCCHHHHHHHHHHCHHHHH
LIAPSQGVHLVLDGSFLPGDSAIMVPHTDDGRVLFAVPWHGRTVVGTTDTPIPAAGLEPR
HCCCCCCEEEEEECCCCCCCCEEEEEECCCCEEEEEECCCCCEEECCCCCCCCCCCCCCC
PLPEEIDFLLSHAARYLTRHPERRDVLSTFAGIRPLVRSDSGGDTASLSRDHTLLVEGSG
CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCC
LVTIAGGKWTTYRKMGEDTVTAAAQVAGLDHRPSVTETLRIHGWQEDATEGPLQVYGSDA
EEEEECCCEEEHHHCCCHHHHHHHHHHCCCCCCCHHHEEEEECCCCCCCCCCEEEECCCH
AALEQLLRENAAWREPLHPALPYCAGEVVWGVRHEWARTVEDVLARRTRALLLDARAAVA
HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAPRVAELMARELGRDSDWQAAQVAAFTHLARGYLPE
HCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKREDLLRHLAETEVWDMIVIGGGATGLGTAVEAAGRGYRTLLLEQGDFAQGTSSRSTKL
CCHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCHH
IHGGVRYLQQGNLTLVLEALRERGLLIRNAPHLVHNLSFVVPLYDWWEGPFYGIGLKLYD
HHHHHHHHHCCCHHHHHHHHHHCCCEEECCCHHHHCCEEEEEHHHHCCCCEEECHHHHHH
VLAGKLGLGPSRLLSREETLGHIPTVEPHGLRGGVIYHDGQFDDSRLAISLALTLADLGG
HHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEEEEHHHHHCC
VALNHFPVTGIISRDGLVAGVEARDRETGGAFRIMGRAVINAAGPFVDGVRRLADPAARD
CEEECCCEEEEEECCCEEECCCCCCCCCCCCEEEHHHHHHHHCCHHHHHHHHHHCHHHHH
LIAPSQGVHLVLDGSFLPGDSAIMVPHTDDGRVLFAVPWHGRTVVGTTDTPIPAAGLEPR
HCCCCCCEEEEEECCCCCCCCEEEEEECCCCEEEEEECCCCCEEECCCCCCCCCCCCCCC
PLPEEIDFLLSHAARYLTRHPERRDVLSTFAGIRPLVRSDSGGDTASLSRDHTLLVEGSG
CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCC
LVTIAGGKWTTYRKMGEDTVTAAAQVAGLDHRPSVTETLRIHGWQEDATEGPLQVYGSDA
EEEEECCCEEEHHHCCCHHHHHHHHHHCCCCCCCHHHEEEEECCCCCCCCCCEEEECCCH
AALEQLLRENAAWREPLHPALPYCAGEVVWGVRHEWARTVEDVLARRTRALLLDARAAVA
HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAPRVAELMARELGRDSDWQAAQVAAFTHLARGYLPE
HCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA