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The map label for this gene is 39997837

Identifier: 39997837

GI number: 39997837

Start: 3019271

End: 3019606

Strand: Reverse

Name: 39997837

Synonym: GSU2743

Alternate gene names: NA

Gene position: 3019606-3019271 (Counterclockwise)

Preceding gene: 39997838

Following gene: 39997836

Centisome position: 79.17

GC content: 58.93

Gene sequence:

>336_bases
ATGAAACATTCCATCGCAGTAGTTGCCGCCGTGGTGGCGGTTGGTCTGTCGTTCGGCGTGGCATCCGCCAAAGGCAAGGG
GGACAAGGACCTGAAGCGCGGCGAAGAGCTGTTCAAGCAGCACTGTGCCGTGTGCCACCCCGAGGGGGGCAACATCGTGA
ACCCCCAGAAGCCCCTCGGCAAAGAGTCCCTGAAGGCCAACAAGATCACGTCCTGGAAGGATATCGTCAAGACCATGCGG
AATCCGGGGCCGGGAATGAGTACCTTCGACGCCAAGGCGATCCCGGACAAGGATGCCAAGCTCGTTGCCGAGTATATCCT
CAAGACCTTCAAGTAA

Upstream 100 bases:

>100_bases
TTGACAACAGGCGCGGGCAATCTATCATTTTCAAATATTCGGATGCATTTCCCGCACGGCGTCGCGGGGGGCATAAATTC
ACCGACAACGAGGTATCGAC

Downstream 100 bases:

>100_bases
TCCGGAGCCGCCTCCGGGAGAAAGGATTCTGTCATGACGATAGTGGTACGTCTGCTTTCGGCCGTCGCTATCCTCGCGTT
GACGGCGGGAAGCGTGCTGG

Product: cytochrome C

Products: NA

Alternate protein names: Cytochrome C Family Protein; Lipoprotein Cytochrome C

Number of amino acids: Translated: 111; Mature: 111

Protein sequence:

>111_residues
MKHSIAVVAAVVAVGLSFGVASAKGKGDKDLKRGEELFKQHCAVCHPEGGNIVNPQKPLGKESLKANKITSWKDIVKTMR
NPGPGMSTFDAKAIPDKDAKLVAEYILKTFK

Sequences:

>Translated_111_residues
MKHSIAVVAAVVAVGLSFGVASAKGKGDKDLKRGEELFKQHCAVCHPEGGNIVNPQKPLGKESLKANKITSWKDIVKTMR
NPGPGMSTFDAKAIPDKDAKLVAEYILKTFK
>Mature_111_residues
MKHSIAVVAAVVAVGLSFGVASAKGKGDKDLKRGEELFKQHCAVCHPEGGNIVNPQKPLGKESLKANKITSWKDIVKTMR
NPGPGMSTFDAKAIPDKDAKLVAEYILKTFK

Specific function: Unknown

COG id: COG2010

COG function: function code C; Cytochrome c, mono- and diheme variants

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11903; Mature: 11903

Theoretical pI: Translated: 10.34; Mature: 10.34

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHSIAVVAAVVAVGLSFGVASAKGKGDKDLKRGEELFKQHCAVCHPEGGNIVNPQKPLG
CCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCEECCCCCCCCCCCCCCC
KESLKANKITSWKDIVKTMRNPGPGMSTFDAKAIPDKDAKLVAEYILKTFK
CHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MKHSIAVVAAVVAVGLSFGVASAKGKGDKDLKRGEELFKQHCAVCHPEGGNIVNPQKPLG
CCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCEECCCCCCCCCCCCCCC
KESLKANKITSWKDIVKTMRNPGPGMSTFDAKAIPDKDAKLVAEYILKTFK
CHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA