Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
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Accession | NC_002939 |
Length | 3,814,139 |
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The map label for this gene is 39997821
Identifier: 39997821
GI number: 39997821
Start: 3005347
End: 3005799
Strand: Direct
Name: 39997821
Synonym: GSU2727
Alternate gene names: NA
Gene position: 3005347-3005799 (Clockwise)
Preceding gene: 39997810
Following gene: 39997823
Centisome position: 78.79
GC content: 52.76
Gene sequence:
>453_bases ATGAGGGATGCCCTAGCCGAGCTTTCAGACGAGAAACGAAAACTCATCGGGAAATACCGCCTTGTTCCCAAGGACATCAA TGGGAAGATTTACTGGGTACGACGGTTCGGCAATCGACCCGATCATCCCTACGCGACCCAGCGGGCACTCAGGAACTGCC ACATCATCGAACTGGTCTTCAGTTTTTACGATCTCTGCGTCGCCAAGATGACCTACTTCAAGAATAACTTCGCCGATTAC ATCCCCTGCAAGAACAATTACCGGGTCGGACAGATGGAAGAGTGCGAGCCGTGGGACATGGAAATCCTTGTCCAGCGGGA AACGGGCATCGTCATCGACCTCAGGAACCTGGCTGAAATCAGTGACATCGAGGTATTCAAGGAAATGTGCAAGTGGCTGG AATCGCGGCTGAACGAAGCCGATGCATGCTCGAGGAAGGTTATGGGGCTGTGA
Upstream 100 bases:
>100_bases GCTAATTGAGGCAAGCAGCAAAACCGATCGACATGTCAGAGAGCATGCGCCTACACACTGTTTATTCGACATCAAACGGG AGGGGGGAGGAAATACCGAC
Downstream 100 bases:
>100_bases TGCAGACCGTGAAGCCGGAGTCAGTCCCCGGTTTCCGCTGATATGAGTTCCGCCCGCACCCGACCGAGGGAGATGGCCGT GTCCATTCTCACGGGAACCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 150; Mature: 150
Protein sequence:
>150_residues MRDALAELSDEKRKLIGKYRLVPKDINGKIYWVRRFGNRPDHPYATQRALRNCHIIELVFSFYDLCVAKMTYFKNNFADY IPCKNNYRVGQMEECEPWDMEILVQRETGIVIDLRNLAEISDIEVFKEMCKWLESRLNEADACSRKVMGL
Sequences:
>Translated_150_residues MRDALAELSDEKRKLIGKYRLVPKDINGKIYWVRRFGNRPDHPYATQRALRNCHIIELVFSFYDLCVAKMTYFKNNFADY IPCKNNYRVGQMEECEPWDMEILVQRETGIVIDLRNLAEISDIEVFKEMCKWLESRLNEADACSRKVMGL >Mature_150_residues MRDALAELSDEKRKLIGKYRLVPKDINGKIYWVRRFGNRPDHPYATQRALRNCHIIELVFSFYDLCVAKMTYFKNNFADY IPCKNNYRVGQMEECEPWDMEILVQRETGIVIDLRNLAEISDIEVFKEMCKWLESRLNEADACSRKVMGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17778; Mature: 17778
Theoretical pI: Translated: 7.77; Mature: 7.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 8.0 %Cys+Met (Translated Protein) 4.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 8.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDALAELSDEKRKLIGKYRLVPKDINGKIYWVRRFGNRPDHPYATQRALRNCHIIELVF CCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHCCHHHHHHH SFYDLCVAKMTYFKNNFADYIPCKNNYRVGQMEECEPWDMEILVQRETGIVIDLRNLAEI HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEHHHHHHH SDIEVFKEMCKWLESRLNEADACSRKVMGL HHHHHHHHHHHHHHHHCCHHHHHHHHHCCC >Mature Secondary Structure MRDALAELSDEKRKLIGKYRLVPKDINGKIYWVRRFGNRPDHPYATQRALRNCHIIELVF CCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHCCHHHHHHH SFYDLCVAKMTYFKNNFADYIPCKNNYRVGQMEECEPWDMEILVQRETGIVIDLRNLAEI HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEHHHHHHH SDIEVFKEMCKWLESRLNEADACSRKVMGL HHHHHHHHHHHHHHHHCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA