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The map label for this gene is bphB [H]

Identifier: 39997761

GI number: 39997761

Start: 2941214

End: 2942710

Strand: Direct

Name: bphB [H]

Synonym: GSU2667

Alternate gene names: 39997761

Gene position: 2941214-2942710 (Clockwise)

Preceding gene: 39997755

Following gene: 39997762

Centisome position: 77.11

GC content: 62.32

Gene sequence:

>1497_bases
ATGATATTCGGCATCATTGCGCTTTCGCTTGTTCTGCAGCTTGTGGCTGCCATTCTCGCCCTCCGGCTGATTCGGGTAAC
CGGCGGGGCTTTCGCGTGGACGCTCCTTGCCCTGGCTTCGCTTCTCATGGTCGGCCGGCGATCGCTGTCCCTCTACCATT
TGTATGCCACCCCCCCAACCGTCCCTCCACTCCTGGTTAACGAAGTCATCGGCCTGTTCATCTCTTTGCTCTTTGTTGCC
GCCGTTGCCGGCCTTTCGCCCCTGCTGGCGCGGATCAAGAGTGCCGAGGACTATTGGCGGGAATCGGAGCACCGCCTCCG
GGGGATGCTCGACAATACCGGCCTGATCGCCGTCATGCTCGACGACCGGGGGGCCATAACGTTCTGCAACCGTCACCTGC
TTGACCTGACCGGCTGGAGCCGGGAAGAGGTGGTCGGCGGCAACTGGTTCGACACGTTTATCCCCGCCGACCAACGGGAA
GGAGTTAGCGAACGCTACCGACACATCCTTGCCGGAAGTAAATTACCTCTTCACAGCCAGAATGAAATCATAACGAAAAG
CGGTGAACGACTCCTCATCGCATGGCACAACACCATTATGCGCGACGGCAGCGGACGGGTAGTCGGGGGAACGGCCATCG
GCGAGGACATCACCGAGCGCATGCGGGTAGAGGAGGAAATCCGGCGCCTCAATACGGAACTTGAGCAGCGGGTCAGTGAA
CGGACAGCGGAGCTGGCTGCGTCAACGCGCGAACTGGAAGGGTTCTGCTACTCGGTTTCCCACGATCTAAGGACCCCCCT
CAGGGCCATTGCCGGTCACAGTGCCATCATCCGCGAGGAGTGCGCCGCCATCACCCATTCCTGCCGCCATCACCTGGGCC
GCATCGAACGGGCGGCAGTCAGGATGGGTGAACTCATCGACGCCTTGCTGGAACTGGCGCGGGTTGCGCGCCACGCGGCC
CACCCCGAGGAGATCAGTCTCAGCAAGATAGCGCAGCAGGTCCTCACCGACCTGCGCATCGCCTCACCCGAACGAAGCGT
AGCCTGTGCGATCGACGAGGGACTTGCCGCCTGCGGCGATCCGGTCCTGGTCCGGGTGGCACTGCAAAATCTGCTGGAGA
ACGCCTGGAAGTTTACTGCGGGAACCCCGGACGCGCTGATCGAGGTCGGCTCCGAAACAGCGGGCGGAGAAACGGTATTT
TTCGTGCGGGACAACGGCGTCGGCTTCGACATGGCCCATGCGGGCAAGATGTTCGGCACGTTCCGGCGCCTGCACCGGGA
CGAAGAATTCGAGGGAACCGGCATCGGCCTCGCCACGGTAAAGCGGATCATCGAACGCCACGGCGGCAGGGTCTGGGCCG
AGGGAGAGCCCGGCCGGATGGCGATCTTCCGCTTCACGCTGCCGGGGCTGCGGCCCTGTGAACCGGAATATCCGGCAGAC
ATGCCGTCTTCGAATGCACACGCACAGGGAGTGCCTGTCAATGTATCAGGAAAGTGA

Upstream 100 bases:

>100_bases
AAGATGAAACGAACGTAAAGTTCTTTCTGGCGGGACAAGTGCGATTGGGATATACTTTTTGTTGGCAAAATCAAACTACT
GCCAACTCTCCGGGGCGCCC

Downstream 100 bases:

>100_bases
AATTTTCAACCTCGTGCTGGGCGTCATCAGCCTGATCTTCTTTGCGGGTTTCGGCACCCGGCGGCTCAGCATACCCCGCT
CCCTGCTCATTGCATACGGC

Product: sensory box histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 498; Mature: 498

Protein sequence:

>498_residues
MIFGIIALSLVLQLVAAILALRLIRVTGGAFAWTLLALASLLMVGRRSLSLYHLYATPPTVPPLLVNEVIGLFISLLFVA
AVAGLSPLLARIKSAEDYWRESEHRLRGMLDNTGLIAVMLDDRGAITFCNRHLLDLTGWSREEVVGGNWFDTFIPADQRE
GVSERYRHILAGSKLPLHSQNEIITKSGERLLIAWHNTIMRDGSGRVVGGTAIGEDITERMRVEEEIRRLNTELEQRVSE
RTAELAASTRELEGFCYSVSHDLRTPLRAIAGHSAIIREECAAITHSCRHHLGRIERAAVRMGELIDALLELARVARHAA
HPEEISLSKIAQQVLTDLRIASPERSVACAIDEGLAACGDPVLVRVALQNLLENAWKFTAGTPDALIEVGSETAGGETVF
FVRDNGVGFDMAHAGKMFGTFRRLHRDEEFEGTGIGLATVKRIIERHGGRVWAEGEPGRMAIFRFTLPGLRPCEPEYPAD
MPSSNAHAQGVPVNVSGK

Sequences:

>Translated_498_residues
MIFGIIALSLVLQLVAAILALRLIRVTGGAFAWTLLALASLLMVGRRSLSLYHLYATPPTVPPLLVNEVIGLFISLLFVA
AVAGLSPLLARIKSAEDYWRESEHRLRGMLDNTGLIAVMLDDRGAITFCNRHLLDLTGWSREEVVGGNWFDTFIPADQRE
GVSERYRHILAGSKLPLHSQNEIITKSGERLLIAWHNTIMRDGSGRVVGGTAIGEDITERMRVEEEIRRLNTELEQRVSE
RTAELAASTRELEGFCYSVSHDLRTPLRAIAGHSAIIREECAAITHSCRHHLGRIERAAVRMGELIDALLELARVARHAA
HPEEISLSKIAQQVLTDLRIASPERSVACAIDEGLAACGDPVLVRVALQNLLENAWKFTAGTPDALIEVGSETAGGETVF
FVRDNGVGFDMAHAGKMFGTFRRLHRDEEFEGTGIGLATVKRIIERHGGRVWAEGEPGRMAIFRFTLPGLRPCEPEYPAD
MPSSNAHAQGVPVNVSGK
>Mature_498_residues
MIFGIIALSLVLQLVAAILALRLIRVTGGAFAWTLLALASLLMVGRRSLSLYHLYATPPTVPPLLVNEVIGLFISLLFVA
AVAGLSPLLARIKSAEDYWRESEHRLRGMLDNTGLIAVMLDDRGAITFCNRHLLDLTGWSREEVVGGNWFDTFIPADQRE
GVSERYRHILAGSKLPLHSQNEIITKSGERLLIAWHNTIMRDGSGRVVGGTAIGEDITERMRVEEEIRRLNTELEQRVSE
RTAELAASTRELEGFCYSVSHDLRTPLRAIAGHSAIIREECAAITHSCRHHLGRIERAAVRMGELIDALLELARVARHAA
HPEEISLSKIAQQVLTDLRIASPERSVACAIDEGLAACGDPVLVRVALQNLLENAWKFTAGTPDALIEVGSETAGGETVF
FVRDNGVGFDMAHAGKMFGTFRRLHRDEEFEGTGIGLATVKRIIERHGGRVWAEGEPGRMAIFRFTLPGLRPCEPEYPAD
MPSSNAHAQGVPVNVSGK

Specific function: Photoreceptor which exists in two forms that are reversibly interconvertible by light:the R form that absorbs maximally in the red region of the spectrum and the FR form that absorbs maximally in the far-red region [H]

COG id: COG0642

COG function: function code T; Signal transduction histidine kinase

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI48994928, Length=381, Percent_Identity=24.4094488188976, Blast_Score=88, Evalue=1e-18,
Organism=Escherichia coli, GI1788549, Length=365, Percent_Identity=26.5753424657534, Blast_Score=87, Evalue=2e-18,
Organism=Escherichia coli, GI1786912, Length=263, Percent_Identity=28.1368821292776, Blast_Score=80, Evalue=3e-16,
Organism=Escherichia coli, GI145693157, Length=313, Percent_Identity=22.0447284345048, Blast_Score=79, Evalue=5e-16,
Organism=Escherichia coli, GI1789149, Length=251, Percent_Identity=26.2948207171315, Blast_Score=78, Evalue=2e-15,
Organism=Escherichia coli, GI1786600, Length=229, Percent_Identity=27.5109170305677, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI1790346, Length=206, Percent_Identity=29.6116504854369, Blast_Score=72, Evalue=8e-14,
Organism=Escherichia coli, GI1788279, Length=233, Percent_Identity=25.3218884120172, Blast_Score=69, Evalue=6e-13,
Organism=Escherichia coli, GI1786783, Length=232, Percent_Identity=26.7241379310345, Blast_Score=68, Evalue=2e-12,
Organism=Escherichia coli, GI1787894, Length=259, Percent_Identity=26.6409266409266, Blast_Score=66, Evalue=5e-12,
Organism=Escherichia coli, GI87081816, Length=262, Percent_Identity=25.5725190839695, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI1790551, Length=209, Percent_Identity=26.7942583732057, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR003018
- InterPro:   IPR013654
- InterPro:   IPR016132
- InterPro:   IPR001294
- InterPro:   IPR013515
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF01590 GAF; PF02518 HATPase_c; PF00512 HisKA; PF08446 PAS_2; PF00360 Phytochrome [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 54669; Mature: 54669

Theoretical pI: Translated: 6.66; Mature: 6.66

Prosite motif: PS50112 PAS ; PS50113 PAC ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFGIIALSLVLQLVAAILALRLIRVTGGAFAWTLLALASLLMVGRRSLSLYHLYATPPT
CHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCC
VPPLLVNEVIGLFISLLFVAAVAGLSPLLARIKSAEDYWRESEHRLRGMLDNTGLIAVML
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE
DDRGAITFCNRHLLDLTGWSREEVVGGNWFDTFIPADQREGVSERYRHILAGSKLPLHSQ
CCCCCEEECCCHHHHCCCCCHHHCCCCCCHHHCCCCHHCCCHHHHHHHHHCCCCCCCCCC
NEIITKSGERLLIAWHNTIMRDGSGRVVGGTAIGEDITERMRVEEEIRRLNTELEQRVSE
CCCEECCCCEEEEEECHHHHCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RTAELAASTRELEGFCYSVSHDLRTPLRAIAGHSAIIREECAAITHSCRHHLGRIERAAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RMGELIDALLELARVARHAAHPEEISLSKIAQQVLTDLRIASPERSVACAIDEGLAACGD
HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHCCC
PVLVRVALQNLLENAWKFTAGTPDALIEVGSETAGGETVFFVRDNGVGFDMAHAGKMFGT
HHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHH
FRRLHRDEEFEGTGIGLATVKRIIERHGGRVWAEGEPGRMAIFRFTLPGLRPCEPEYPAD
HHHHHCCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCCEEEEEEECCCCCCCCCCCCCC
MPSSNAHAQGVPVNVSGK
CCCCCCCCCCCCEECCCC
>Mature Secondary Structure
MIFGIIALSLVLQLVAAILALRLIRVTGGAFAWTLLALASLLMVGRRSLSLYHLYATPPT
CHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCC
VPPLLVNEVIGLFISLLFVAAVAGLSPLLARIKSAEDYWRESEHRLRGMLDNTGLIAVML
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE
DDRGAITFCNRHLLDLTGWSREEVVGGNWFDTFIPADQREGVSERYRHILAGSKLPLHSQ
CCCCCEEECCCHHHHCCCCCHHHCCCCCCHHHCCCCHHCCCHHHHHHHHHCCCCCCCCCC
NEIITKSGERLLIAWHNTIMRDGSGRVVGGTAIGEDITERMRVEEEIRRLNTELEQRVSE
CCCEECCCCEEEEEECHHHHCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RTAELAASTRELEGFCYSVSHDLRTPLRAIAGHSAIIREECAAITHSCRHHLGRIERAAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RMGELIDALLELARVARHAAHPEEISLSKIAQQVLTDLRIASPERSVACAIDEGLAACGD
HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHCCC
PVLVRVALQNLLENAWKFTAGTPDALIEVGSETAGGETVFFVRDNGVGFDMAHAGKMFGT
HHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHH
FRRLHRDEEFEGTGIGLATVKRIIERHGGRVWAEGEPGRMAIFRFTLPGLRPCEPEYPAD
HHHHHCCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCCEEEEEEECCCCCCCCCCCCCC
MPSSNAHAQGVPVNVSGK
CCCCCCCCCCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]