Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
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Accession | NC_002939 |
Length | 3,814,139 |
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The map label for this gene is 39997686
Identifier: 39997686
GI number: 39997686
Start: 2855722
End: 2856504
Strand: Direct
Name: 39997686
Synonym: GSU2591
Alternate gene names: NA
Gene position: 2855722-2856504 (Clockwise)
Preceding gene: 39997684
Following gene: 39997688
Centisome position: 74.87
GC content: 54.02
Gene sequence:
>783_bases ATGAGATTTTACACAAAAACTCACAAACACTACTGCGGAATCGATCTTCATGCGAAGAAAATGTTCCTCTGTATCCTGGA TGCACAGGGCGAGGTGCTCCTGCACCGCAACATCTCAAGTTCGCCGGAGGCCTTTCTCAAAGCAGTCGCGCCTTTCCGTG ATGGCTTGGTGGTCGGCGTGGAATGCATGTTTGCCTGGTACTGGCTTGCCGATCTCTGCCGTAAGGAAGGAATCGAATTT GTCTTGGGTCATGCCCTTTACATGAAAGCCGTCCACGGCGGGAAAGCGAAAAACGACAAGATCGATTCCCACAAGATCGC GGTGCTGTTACGCGGCGGCTCGTTCCCTGTTGCTTACGTCTACCCTCCGGAGATGCGCGCTACCCGCGATCTGCTGCGCC GTCGGACCCATATCCACGGTGTCGGGCAAATCCTGGCCCTGGTGATGCTCTACGAGATCCACGACATCAATCGTTTTGAG TCGGTTCAGGATTTCGCCTCTTACTGCCGCTTAGTCAAATGCAGTCACGAATCAGCCGGGAAGAAGAAAGGCAGCGGCGG CGCCAAGATCGGCAATGCGCATCTGAAGTGGGCCTTTTCCGAAGCAGCCATGCTGTTCATCCGTTACAACCCGCCGGCCA AGAAGCTGGTGGAGAATCTGGCCAAGGTACATGGCAAGGGAAAGGCTATCGGAATCATAGCGCACAAGCTGGCGCGGGCG ATCTATTACATGCTGAAAAATAACGTGCCGTTCAACTTGGAGAAGTTCATGGCAACAGCATAG
Upstream 100 bases:
>100_bases CTGTCGCCGCAGGATACTATGTAAGGCCCCCCTTGGGCATACGGATTTTTGCCGTATGCTGGACTTTGCGAGAACCCATT CTCCAAAGGAGGCCTTACCC
Downstream 100 bases:
>100_bases AGCTGGAGGGGATGGAAGCAGCTACAACGTTCACCTGGAGCCACATGGGGCGAGCATGATCACGACCGTGAAAGATGAGT AACAGTGCGTCTTTGAACGC
Product: ISGsu5, transposase
Products: NA
Alternate protein names: ISGsu4 Transposase; Arginyl-TRNA Synthetase Class Ic; ISGsu5 Transposase; Transposase Or Inactivated Derivative; ISGsu5 Transposase Truncation
Number of amino acids: Translated: 260; Mature: 260
Protein sequence:
>260_residues MRFYTKTHKHYCGIDLHAKKMFLCILDAQGEVLLHRNISSSPEAFLKAVAPFRDGLVVGVECMFAWYWLADLCRKEGIEF VLGHALYMKAVHGGKAKNDKIDSHKIAVLLRGGSFPVAYVYPPEMRATRDLLRRRTHIHGVGQILALVMLYEIHDINRFE SVQDFASYCRLVKCSHESAGKKKGSGGAKIGNAHLKWAFSEAAMLFIRYNPPAKKLVENLAKVHGKGKAIGIIAHKLARA IYYMLKNNVPFNLEKFMATA
Sequences:
>Translated_260_residues MRFYTKTHKHYCGIDLHAKKMFLCILDAQGEVLLHRNISSSPEAFLKAVAPFRDGLVVGVECMFAWYWLADLCRKEGIEF VLGHALYMKAVHGGKAKNDKIDSHKIAVLLRGGSFPVAYVYPPEMRATRDLLRRRTHIHGVGQILALVMLYEIHDINRFE SVQDFASYCRLVKCSHESAGKKKGSGGAKIGNAHLKWAFSEAAMLFIRYNPPAKKLVENLAKVHGKGKAIGIIAHKLARA IYYMLKNNVPFNLEKFMATA >Mature_260_residues MRFYTKTHKHYCGIDLHAKKMFLCILDAQGEVLLHRNISSSPEAFLKAVAPFRDGLVVGVECMFAWYWLADLCRKEGIEF VLGHALYMKAVHGGKAKNDKIDSHKIAVLLRGGSFPVAYVYPPEMRATRDLLRRRTHIHGVGQILALVMLYEIHDINRFE SVQDFASYCRLVKCSHESAGKKKGSGGAKIGNAHLKWAFSEAAMLFIRYNPPAKKLVENLAKVHGKGKAIGIIAHKLARA IYYMLKNNVPFNLEKFMATA
Specific function: Unknown
COG id: COG3547
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29273; Mature: 29273
Theoretical pI: Translated: 10.20; Mature: 10.20
Prosite motif: PS00327 BACTERIAL_OPSIN_RET
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFYTKTHKHYCGIDLHAKKMFLCILDAQGEVLLHRNISSSPEAFLKAVAPFRDGLVVGV CCCCCCCCCEECCCEEECCEEEEEEECCCCCEEEECCCCCCHHHHHHHHHHHHCCHHHHH ECMFAWYWLADLCRKEGIEFVLGHALYMKAVHGGKAKNDKIDSHKIAVLLRGGSFPVAYV HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCEEEE YPPEMRATRDLLRRRTHIHGVGQILALVMLYEIHDINRFESVQDFASYCRLVKCSHESAG ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHCC KKKGSGGAKIGNAHLKWAFSEAAMLFIRYNPPAKKLVENLAKVHGKGKAIGIIAHKLARA CCCCCCCCEECCCCEEEEECCEEEEEEEECCCHHHHHHHHHHHCCCCCEEHHHHHHHHHH IYYMLKNNVPFNLEKFMATA HHHHHHCCCCCCHHHHHHCC >Mature Secondary Structure MRFYTKTHKHYCGIDLHAKKMFLCILDAQGEVLLHRNISSSPEAFLKAVAPFRDGLVVGV CCCCCCCCCEECCCEEECCEEEEEEECCCCCEEEECCCCCCHHHHHHHHHHHHCCHHHHH ECMFAWYWLADLCRKEGIEFVLGHALYMKAVHGGKAKNDKIDSHKIAVLLRGGSFPVAYV HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCEEEE YPPEMRATRDLLRRRTHIHGVGQILALVMLYEIHDINRFESVQDFASYCRLVKCSHESAG ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHCC KKKGSGGAKIGNAHLKWAFSEAAMLFIRYNPPAKKLVENLAKVHGKGKAIGIIAHKLARA CCCCCCCCEECCCCEEEEECCEEEEEEEECCCHHHHHHHHHHHCCCCCEEHHHHHHHHHH IYYMLKNNVPFNLEKFMATA HHHHHHCCCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA