| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is arnT [H]
Identifier: 39997650
GI number: 39997650
Start: 2816750
End: 2818363
Strand: Direct
Name: arnT [H]
Synonym: GSU2555
Alternate gene names: 39997650
Gene position: 2816750-2818363 (Clockwise)
Preceding gene: 39997649
Following gene: 39997651
Centisome position: 73.85
GC content: 64.44
Gene sequence:
>1614_bases TTGAGTCGTAGGGCGCTCCCCTTCCTGGCCATCTACTTCCTGATCCTCCTCTACCCCGGGTCGGCCCTCCACCTGAGAGA GTCCACCGAGGCCCGCTACGGTGAAATCGCCCGGGAGATGGTAGTGACCGGGAACTGGCTCGAGCCGCACCTGAACGGCA TCAAGCACTTCCACAAGCCTCCCCTGTCCATGTGGGGAATGGCCGCCGGGATGGAGCTCTTCGGCATCAACGGCTTCGGG GTCCGCTTTTTCGGCATCGTTGCCGCAACGGCAGCCCTGGCCGCCCTGCTCGGGACGGCCCGCATCTTCCTCGGCAGCGG GGACGAGGCGATCAATGCCATGCTCATCTGCGGCACATCGCTCCTCTTCCTCTCCTCGTCACGGGTGGTTTCCACCGACA TCTACCTGGCCTGCTTCACGGCCCTGGCCCAACTCATGCTCTTCCGCCAGCTGTACGGCGGGCGCAGCTTCTGGAACGCC CCCCTCTACGGGCTGTTCCTGGGCCTCGGGTTCCTCACCAAGGGACCGATCATCCTGCTCTTCACCCTGCTCCCCTTTCT GGTGGCCAAGACCTTTGACCGCGATCACCGCAACGTTTTCACCTGGCGCGAGGTGGCCGCGGCGGCCGGCGCCTTTGCAG CGGTGGCACTCCCCTGGTACCTGGCGGTGAGCATCAGCAATCCGGAGCTTCCCGACTACTTCCTCAAAGTCCAGACCGTG GACCGGGTGGCCACCAACCGCTTCGGCCGGGACAAGCCGTTCTGGTACTTCTTCGTCATCTTCAGCGCCACCTTTTTCCC CTACACGCTGTTCCTGGCCCGGGGCGTCGCCGGGTGGAAGCAGCTCGACGGACGGATCAGGACGATCTTCGTCTATATAG TGGCGCCGCTGGTAGTGTTCTCCCTGGCAAAGAGCAAGCTGTCCGCCTACATCCTCCCCTTTTACGGCACGGCCTCCATC ATAACGGCATACGCGCTGGCCCGGTTCGAGACGGCCCGGCTGCGGGCCGCCACCCTGGTCATCCTCACCCTGGCCGCCGT TGCGGCCGGCGGAACCGGCTTTTTCTACAAACCGGCCGCCCCCCTGAAAATCCAGCTCCTCCTCTACGGCGTAGCGCTCC TCGTCCTGTGCGCCTACCTCTGGAAGAGCCGCCTCTCGCCCCAGTTCGTGAGAAACACGGCCCTTTATACCCTCTGTCTG TCGGTGACGATCTATGGCGCCATGACGCATCTGGGCCCACACCTTAAGGGGTACGGCGACATGGTCGCCGCCATCGACCG CATCGACCCGGAGCACAAGCGCGACATCCTCATGTACGGCACGTTCATCCCCTCGCTCTCCTTCTACCGGAACCGGATCG CCGCCATGGGACTCGTGACCGACCGGGACCTGCGCTTTGAGGAGGACGGCGCCAACCGGGACATCTACCTTCCCACCGAT GCCGACGTGGAGCGGTTTCTGGCCGCACGGGGCGAAATCTTCGTGGTGACCGACCAGGGCCAGATGGATCAGTTCCGGCT GAAGCACGCCTGCTCCGTCACGCCGGTCTTTGTCCAGCGCAAGCACACGGCCTATCTCTGCCGAAGGGAGCCTCCCCCGC ACCCGGTGCCCTGA
Upstream 100 bases:
>100_bases GACCCGGTCTTCATCGTGGGACAATCCACCGGTACGGTCATCTATCTGCGCAACCTCTACTTCATCCGCAAAAACAAGAG GAAGGACGTGATCGATGCGC
Downstream 100 bases:
>100_bases TCCGCCCCCATGTTCTCCCATCAAAGTGTTCTGCCGGGAACGATGACTGTGATATCATCCCGGCCACACGAACCTTCAGC GCGGAGCAGTCATGCAGATC
Product: melittin resistance protein
Products: NA
Alternate protein names: 4-amino-4-deoxy-L-arabinose lipid A transferase; Lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase; Undecaprenyl phosphate-alpha-L-Ara4N transferase [H]
Number of amino acids: Translated: 537; Mature: 536
Protein sequence:
>537_residues MSRRALPFLAIYFLILLYPGSALHLRESTEARYGEIAREMVVTGNWLEPHLNGIKHFHKPPLSMWGMAAGMELFGINGFG VRFFGIVAATAALAALLGTARIFLGSGDEAINAMLICGTSLLFLSSSRVVSTDIYLACFTALAQLMLFRQLYGGRSFWNA PLYGLFLGLGFLTKGPIILLFTLLPFLVAKTFDRDHRNVFTWREVAAAAGAFAAVALPWYLAVSISNPELPDYFLKVQTV DRVATNRFGRDKPFWYFFVIFSATFFPYTLFLARGVAGWKQLDGRIRTIFVYIVAPLVVFSLAKSKLSAYILPFYGTASI ITAYALARFETARLRAATLVILTLAAVAAGGTGFFYKPAAPLKIQLLLYGVALLVLCAYLWKSRLSPQFVRNTALYTLCL SVTIYGAMTHLGPHLKGYGDMVAAIDRIDPEHKRDILMYGTFIPSLSFYRNRIAAMGLVTDRDLRFEEDGANRDIYLPTD ADVERFLAARGEIFVVTDQGQMDQFRLKHACSVTPVFVQRKHTAYLCRREPPPHPVP
Sequences:
>Translated_537_residues MSRRALPFLAIYFLILLYPGSALHLRESTEARYGEIAREMVVTGNWLEPHLNGIKHFHKPPLSMWGMAAGMELFGINGFG VRFFGIVAATAALAALLGTARIFLGSGDEAINAMLICGTSLLFLSSSRVVSTDIYLACFTALAQLMLFRQLYGGRSFWNA PLYGLFLGLGFLTKGPIILLFTLLPFLVAKTFDRDHRNVFTWREVAAAAGAFAAVALPWYLAVSISNPELPDYFLKVQTV DRVATNRFGRDKPFWYFFVIFSATFFPYTLFLARGVAGWKQLDGRIRTIFVYIVAPLVVFSLAKSKLSAYILPFYGTASI ITAYALARFETARLRAATLVILTLAAVAAGGTGFFYKPAAPLKIQLLLYGVALLVLCAYLWKSRLSPQFVRNTALYTLCL SVTIYGAMTHLGPHLKGYGDMVAAIDRIDPEHKRDILMYGTFIPSLSFYRNRIAAMGLVTDRDLRFEEDGANRDIYLPTD ADVERFLAARGEIFVVTDQGQMDQFRLKHACSVTPVFVQRKHTAYLCRREPPPHPVP >Mature_536_residues SRRALPFLAIYFLILLYPGSALHLRESTEARYGEIAREMVVTGNWLEPHLNGIKHFHKPPLSMWGMAAGMELFGINGFGV RFFGIVAATAALAALLGTARIFLGSGDEAINAMLICGTSLLFLSSSRVVSTDIYLACFTALAQLMLFRQLYGGRSFWNAP LYGLFLGLGFLTKGPIILLFTLLPFLVAKTFDRDHRNVFTWREVAAAAGAFAAVALPWYLAVSISNPELPDYFLKVQTVD RVATNRFGRDKPFWYFFVIFSATFFPYTLFLARGVAGWKQLDGRIRTIFVYIVAPLVVFSLAKSKLSAYILPFYGTASII TAYALARFETARLRAATLVILTLAAVAAGGTGFFYKPAAPLKIQLLLYGVALLVLCAYLWKSRLSPQFVRNTALYTLCLS VTIYGAMTHLGPHLKGYGDMVAAIDRIDPEHKRDILMYGTFIPSLSFYRNRIAAMGLVTDRDLRFEEDGANRDIYLPTDA DVERFLAARGEIFVVTDQGQMDQFRLKHACSVTPVFVQRKHTAYLCRREPPPHPVP
Specific function: Catalyzes the transfer of the L-Ara4N moiety of the glycolipid undecaprenyl phosphate-alpha-L-Ara4N to lipid A. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]
COG id: COG1807
COG function: function code M; 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 83 family [H]
Homologues:
Organism=Escherichia coli, GI1788591, Length=397, Percent_Identity=29.7229219143577, Blast_Score=122, Evalue=4e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022839 - InterPro: IPR003342 [H]
Pfam domain/function: PF02366 PMT [H]
EC number: =2.4.2.43 [H]
Molecular weight: Translated: 59872; Mature: 59741
Theoretical pI: Translated: 9.85; Mature: 9.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRRALPFLAIYFLILLYPGSALHLRESTEARYGEIAREMVVTGNWLEPHLNGIKHFHKP CCCCCHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCC PLSMWGMAAGMELFGINGFGVRFFGIVAATAALAALLGTARIFLGSGDEAINAMLICGTS CHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHCCH LLFLSSSRVVSTDIYLACFTALAQLMLFRQLYGGRSFWNAPLYGLFLGLGFLTKGPIILL HHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHH FTLLPFLVAKTFDRDHRNVFTWREVAAAAGAFAAVALPWYLAVSISNPELPDYFLKVQTV HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCCHHEEHHHH DRVATNRFGRDKPFWYFFVIFSATFFPYTLFLARGVAGWKQLDGRIRTIFVYIVAPLVVF HHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHH SLAKSKLSAYILPFYGTASIITAYALARFETARLRAATLVILTLAAVAAGGTGFFYKPAA HHHHHHHCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCC PLKIQLLLYGVALLVLCAYLWKSRLSPQFVRNTALYTLCLSVTIYGAMTHLGPHLKGYGD CHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH MVAAIDRIDPEHKRDILMYGTFIPSLSFYRNRIAAMGLVTDRDLRFEEDGANRDIYLPTD HHHHHHHCCCHHHCCEEEEEHHHCCHHHHHHHHHHHCEEECCCCEECCCCCCCCEEECCC ADVERFLAARGEIFVVTDQGQMDQFRLKHACSVTPVFVQRKHTAYLCRREPPPHPVP CCHHHHHHCCCCEEEEECCCCHHHHHHHHHCCCCHHHHCCCCHHHHCCCCCCCCCCC >Mature Secondary Structure SRRALPFLAIYFLILLYPGSALHLRESTEARYGEIAREMVVTGNWLEPHLNGIKHFHKP CCCCHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCC PLSMWGMAAGMELFGINGFGVRFFGIVAATAALAALLGTARIFLGSGDEAINAMLICGTS CHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHCCH LLFLSSSRVVSTDIYLACFTALAQLMLFRQLYGGRSFWNAPLYGLFLGLGFLTKGPIILL HHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHH FTLLPFLVAKTFDRDHRNVFTWREVAAAAGAFAAVALPWYLAVSISNPELPDYFLKVQTV HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCCHHEEHHHH DRVATNRFGRDKPFWYFFVIFSATFFPYTLFLARGVAGWKQLDGRIRTIFVYIVAPLVVF HHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHH SLAKSKLSAYILPFYGTASIITAYALARFETARLRAATLVILTLAAVAAGGTGFFYKPAA HHHHHHHCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCC PLKIQLLLYGVALLVLCAYLWKSRLSPQFVRNTALYTLCLSVTIYGAMTHLGPHLKGYGD CHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH MVAAIDRIDPEHKRDILMYGTFIPSLSFYRNRIAAMGLVTDRDLRFEEDGANRDIYLPTD HHHHHHHCCCHHHCCEEEEEHHHCCHHHHHHHHHHHCEEECCCCEECCCCCCCCEEECCC ADVERFLAARGEIFVVTDQGQMDQFRLKHACSVTPVFVQRKHTAYLCRREPPPHPVP CCHHHHHHCCCCEEEEECCCCHHHHHHHHHCCCCHHHHCCCCHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA