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The map label for this gene is 39997608

Identifier: 39997608

GI number: 39997608

Start: 2772615

End: 2773055

Strand: Direct

Name: 39997608

Synonym: GSU2513

Alternate gene names: NA

Gene position: 2772615-2773055 (Clockwise)

Preceding gene: 39997605

Following gene: 39997610

Centisome position: 72.69

GC content: 65.99

Gene sequence:

>441_bases
ATGATTTCAAAAGCTATCAGTGCCCAATGCCGCCACCTGCATCGGGCCGCCGTTCTTGTGGCAGTGATGTCCGCCCTTGC
CGCAACCGGCTGTTCGAAGAAGGAGGCACCGCAGGCACCCGCGCCGTCCGCCGGGACGCCGCAGGCAGGGGCGCCGGCCG
CCATGCCCGAGGGGATGAGCGGCCAGCAGCAAACCGCCATGGGACGGGCCATCTTCAACAAGCGGTGCGCCAGCTGCCAC
GGCACGGACGGCAACGGCGCGGGGAGCCGCAGCGGACCGGCACTCGACCAGGCCCAGTTCAAGTACGGCAGAACCCCCGA
GGCAATCCGGGAAAGCATCGTCAAGGGACGCCCCAACGGCATGCCTGCCTTTGGAGCCGCCTTCCAGGAAATTGAAATCG
ACACCCTGGTCGGCTACGTGATGGGTCTCACCAAGCAGTAA

Upstream 100 bases:

>100_bases
GGCAGTGTGCCGTGAAACGGCCCTTGACGGCCATCCCCTTGACAGACCACCGGCTCTCACTATACTTCATGAGATGTAAT
TTACCAAACGGAGGTACGCC

Downstream 100 bases:

>100_bases
ATTACGTCACCCATTCGCCACGTTCCCGCCCCGAAGACACCCCCTGCCCTGACGGGAGGGCACGGGGGCCTCTCGGAGAA
AACACCCCGCACGAAAGCGG

Product: cytochrome C

Products: NA

Alternate protein names: Cytochrome C Family Protein; Cytochrome C

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MISKAISAQCRHLHRAAVLVAVMSALAATGCSKKEAPQAPAPSAGTPQAGAPAAMPEGMSGQQQTAMGRAIFNKRCASCH
GTDGNGAGSRSGPALDQAQFKYGRTPEAIRESIVKGRPNGMPAFGAAFQEIEIDTLVGYVMGLTKQ

Sequences:

>Translated_146_residues
MISKAISAQCRHLHRAAVLVAVMSALAATGCSKKEAPQAPAPSAGTPQAGAPAAMPEGMSGQQQTAMGRAIFNKRCASCH
GTDGNGAGSRSGPALDQAQFKYGRTPEAIRESIVKGRPNGMPAFGAAFQEIEIDTLVGYVMGLTKQ
>Mature_146_residues
MISKAISAQCRHLHRAAVLVAVMSALAATGCSKKEAPQAPAPSAGTPQAGAPAAMPEGMSGQQQTAMGRAIFNKRCASCH
GTDGNGAGSRSGPALDQAQFKYGRTPEAIRESIVKGRPNGMPAFGAAFQEIEIDTLVGYVMGLTKQ

Specific function: Unknown

COG id: COG2010

COG function: function code C; Cytochrome c, mono- and diheme variants

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14999; Mature: 14999

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISKAISAQCRHLHRAAVLVAVMSALAATGCSKKEAPQAPAPSAGTPQAGAPAAMPEGMS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GQQQTAMGRAIFNKRCASCHGTDGNGAGSRSGPALDQAQFKYGRTPEAIRESIVKGRPNG
CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHCCCCCC
MPAFGAAFQEIEIDTLVGYVMGLTKQ
CCHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MISKAISAQCRHLHRAAVLVAVMSALAATGCSKKEAPQAPAPSAGTPQAGAPAAMPEGMS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GQQQTAMGRAIFNKRCASCHGTDGNGAGSRSGPALDQAQFKYGRTPEAIRESIVKGRPNG
CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHCCCCCC
MPAFGAAFQEIEIDTLVGYVMGLTKQ
CCHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA