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The map label for this gene is hybD [C]

Identifier: 39997517

GI number: 39997517

Start: 2654556

End: 2655023

Strand: Direct

Name: hybD [C]

Synonym: GSU2422

Alternate gene names: 39997517

Gene position: 2654556-2655023 (Clockwise)

Preceding gene: 39997516

Following gene: 39997518

Centisome position: 69.6

GC content: 69.23

Gene sequence:

>468_bases
GTGGTGGTCTGCGTCGGCAACGACCTGGTGGCCGACGACGCCGTGGGGTACGAGATCCACCGGCGGCTGGCCGGGGCGCC
CCTCCCCGCGGGGGTGCGGCTCCACTACGCGGCCGTGGGCGGGATCGCCCTCCTGGACTACCTGACCGGCGGGGAAGCGG
CCATGATCGTGGTGGACGCGGTCCAGTTCGGCGCACCGGCCGGGACGATCCACCAGCTGGCGTGGGACGAGCTCCCGAAT
TTCGGGGGCGGGTCCATCTCGGCCCACTCCATCGGCCTGAAGGAAACCATGGACATCGGGAAGCTCCTCTACCCGGAGCG
GCTGCCGCCGACGGTGACCCTGGTGGGAATCGAGGGGCGCTGTTTCGACCGGACCCGCGACGCCATGTCGCCGGAGGTGG
CATCAGCCATAGAACCGGCCGTCGCCCTGATCCGCAACTACCTCCATACTCTTGGACAAGGAATCTGA

Upstream 100 bases:

>100_bases
TCCTGAACGAGCTCATCTGCCGCCCGGTGAAATCGGAGGTCGTGTCATGCGGGGACCAGTGCCGACTGAACCTCAGAACC
CAGTAGCGGCTCCGGGGGTC

Downstream 100 bases:

>100_bases
CATGAAGAAATCAGGCGCCAAACCAGCGGAAATGACCCTGCACCGTGAAATCCAGCGACTCGCCGAGGCCATGATGAACG
GGAGGCTCGACGAACGGGGG

Product: hydrogenase maturation protease

Products: NA

Alternate protein names: Hydrogenase Expression/Formation Protein; Peptidase; Methyl Viologen-Reducing Hydrogenase Maturation Protease

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MVVCVGNDLVADDAVGYEIHRRLAGAPLPAGVRLHYAAVGGIALLDYLTGGEAAMIVVDAVQFGAPAGTIHQLAWDELPN
FGGGSISAHSIGLKETMDIGKLLYPERLPPTVTLVGIEGRCFDRTRDAMSPEVASAIEPAVALIRNYLHTLGQGI

Sequences:

>Translated_155_residues
MVVCVGNDLVADDAVGYEIHRRLAGAPLPAGVRLHYAAVGGIALLDYLTGGEAAMIVVDAVQFGAPAGTIHQLAWDELPN
FGGGSISAHSIGLKETMDIGKLLYPERLPPTVTLVGIEGRCFDRTRDAMSPEVASAIEPAVALIRNYLHTLGQGI
>Mature_155_residues
MVVCVGNDLVADDAVGYEIHRRLAGAPLPAGVRLHYAAVGGIALLDYLTGGEAAMIVVDAVQFGAPAGTIHQLAWDELPN
FGGGSISAHSIGLKETMDIGKLLYPERLPPTVTLVGIEGRCFDRTRDAMSPEVASAIEPAVALIRNYLHTLGQGI

Specific function: Protease Involved In The C-Terminal Processing Of Hybc, The Large Subunit Of Hydrogenase 2. Specifically Cleaves Off A 15 Amino Acid Peptide From The C Terminus Of The Precursor Of Hybc. [C]

COG id: COG0680

COG function: function code C; Ni,Fe-hydrogenase maturation factor

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.4.24.- [C]

Molecular weight: Translated: 16259; Mature: 16259

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVCVGNDLVADDAVGYEIHRRLAGAPLPAGVRLHYAAVGGIALLDYLTGGEAAMIVVDA
CEEECCCCEECCCHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHCCCCEEEEEEEH
VQFGAPAGTIHQLAWDELPNFGGGSISAHSIGLKETMDIGKLLYPERLPPTVTLVGIEGR
HHHCCCCCHHHHHHHHHCCCCCCCCCEECCCCCHHHHHHHHHCCCCCCCCEEEEEECCCC
CFDRTRDAMSPEVASAIEPAVALIRNYLHTLGQGI
CCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MVVCVGNDLVADDAVGYEIHRRLAGAPLPAGVRLHYAAVGGIALLDYLTGGEAAMIVVDA
CEEECCCCEECCCHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHCCCCEEEEEEEH
VQFGAPAGTIHQLAWDELPNFGGGSISAHSIGLKETMDIGKLLYPERLPPTVTLVGIEGR
HHHCCCCCHHHHHHHHHCCCCCCCCCEECCCCCHHHHHHHHHCCCCCCCCEEEEEECCCC
CFDRTRDAMSPEVASAIEPAVALIRNYLHTLGQGI
CCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA