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The map label for this gene is blc [H]

Identifier: 39997424

GI number: 39997424

Start: 2545314

End: 2545871

Strand: Direct

Name: blc [H]

Synonym: GSU2326

Alternate gene names: 39997424

Gene position: 2545314-2545871 (Clockwise)

Preceding gene: 39997423

Following gene: 39997425

Centisome position: 66.73

GC content: 60.39

Gene sequence:

>558_bases
ATGAAAACCCTGTTCATACTGGCAGTCGCCACGCTTCTTGCGGCCGGATTCGCCTGTCGCGCCGCCATGGCCGCATCGGC
ATCCCCCCCGCTCCTGACGGTTGAATATGTCGATCTGAACCGCTACGTGGGCACATGGTACGAGATCGCCCGCTACCCCA
ACAGCTTCCAGAAGGGGTGCCTGGGGAGCAACGCCCACTACGCGCTGCGGCAGGACGGCGATATCGACGTGGTGAACAGC
TGCCGCGATGTGGAGGATGGGGACATCCGCCGGGCAAAGGGGCGGGCGTGGGTGGTTGACAAAGCCTCCAACGCACGGCT
CAAGGTCTCCTTTTTCTGGCCCTTCCGGGGGGACTACTGGATCATCGAATTGGGAAAGGATTATGAATACGCCGTGGTGG
GCACCCCGAACCGTAAATACCTGTGGGTTCTCAGCCGCACGCCGGTTATGGACGACGACGTGTATGCTGCCATTATGGAA
CGGGTTCGGCGACAGGGGTTCGATCCCGAACGAGTCATCCGCGAAACCAACACCACGCGAAAGAATGGTGCATCATGA

Upstream 100 bases:

>100_bases
GGCATGGCTCTATGCGATGCTGGTGGGAGCCGTGGTGCTGCCGGTCATATCGCTGGACAAGTGGGTCAGGAGGCATCGTC
ATGAATGAGGGGAGGACTTC

Downstream 100 bases:

>100_bases
ACATCGCCATTATCGGTGGCGGCATTGCGGGGCTGGCAACGGCGCATCTGCTCTGCGACGATCATCGGGTGACCCTCTTC
GAGGCCAACGACTACCTGGG

Product: outer membrane lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MKTLFILAVATLLAAGFACRAAMAASASPPLLTVEYVDLNRYVGTWYEIARYPNSFQKGCLGSNAHYALRQDGDIDVVNS
CRDVEDGDIRRAKGRAWVVDKASNARLKVSFFWPFRGDYWIIELGKDYEYAVVGTPNRKYLWVLSRTPVMDDDVYAAIME
RVRRQGFDPERVIRETNTTRKNGAS

Sequences:

>Translated_185_residues
MKTLFILAVATLLAAGFACRAAMAASASPPLLTVEYVDLNRYVGTWYEIARYPNSFQKGCLGSNAHYALRQDGDIDVVNS
CRDVEDGDIRRAKGRAWVVDKASNARLKVSFFWPFRGDYWIIELGKDYEYAVVGTPNRKYLWVLSRTPVMDDDVYAAIME
RVRRQGFDPERVIRETNTTRKNGAS
>Mature_185_residues
MKTLFILAVATLLAAGFACRAAMAASASPPLLTVEYVDLNRYVGTWYEIARYPNSFQKGCLGSNAHYALRQDGDIDVVNS
CRDVEDGDIRRAKGRAWVVDKASNARLKVSFFWPFRGDYWIIELGKDYEYAVVGTPNRKYLWVLSRTPVMDDDVYAAIME
RVRRQGFDPERVIRETNTTRKNGAS

Specific function: Involved in the storage or transport of lipids necessary for membrane maintenance under stressful conditions. Displays a binding preference for lysophospholipids [H]

COG id: COG3040

COG function: function code M; Bacterial lipocalin

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the calycin superfamily. Lipocalin family [H]

Homologues:

Organism=Homo sapiens, GI4502163, Length=160, Percent_Identity=29.375, Blast_Score=70, Evalue=1e-12,
Organism=Escherichia coli, GI1790592, Length=175, Percent_Identity=38.8571428571429, Blast_Score=129, Evalue=2e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012674
- InterPro:   IPR011038
- InterPro:   IPR013208
- InterPro:   IPR022271
- InterPro:   IPR002446
- InterPro:   IPR022272 [H]

Pfam domain/function: PF08212 Lipocalin_2 [H]

EC number: NA

Molecular weight: Translated: 20973; Mature: 20973

Theoretical pI: Translated: 9.04; Mature: 9.04

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00213 LIPOCALIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTLFILAVATLLAAGFACRAAMAASASPPLLTVEYVDLNRYVGTWYEIARYPNSFQKGC
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCHHHHHHHHHHCCCHHHHCC
LGSNAHYALRQDGDIDVVNSCRDVEDGDIRRAKGRAWVVDKASNARLKVSFFWPFRGDYW
CCCCCCEEEECCCCEEEHHCCCCCCCCCEEECCCCEEEEECCCCCEEEEEEEECCCCCEE
IIELGKDYEYAVVGTPNRKYLWVLSRTPVMDDDVYAAIMERVRRQGFDPERVIRETNTTR
EEEECCCCEEEEEECCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCC
KNGAS
CCCCC
>Mature Secondary Structure
MKTLFILAVATLLAAGFACRAAMAASASPPLLTVEYVDLNRYVGTWYEIARYPNSFQKGC
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCHHHHHHHHHHCCCHHHHCC
LGSNAHYALRQDGDIDVVNSCRDVEDGDIRRAKGRAWVVDKASNARLKVSFFWPFRGDYW
CCCCCCEEEECCCCEEEHHCCCCCCCCCEEECCCCEEEEECCCCCEEEEEEEECCCCCEE
IIELGKDYEYAVVGTPNRKYLWVLSRTPVMDDDVYAAIMERVRRQGFDPERVIRETNTTR
EEEECCCCEEEEEECCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCC
KNGAS
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]