Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
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Accession | NC_002939 |
Length | 3,814,139 |
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The map label for this gene is 39997409
Identifier: 39997409
GI number: 39997409
Start: 2528730
End: 2529287
Strand: Direct
Name: 39997409
Synonym: GSU2311
Alternate gene names: NA
Gene position: 2528730-2529287 (Clockwise)
Preceding gene: 39997408
Following gene: 39997410
Centisome position: 66.3
GC content: 60.04
Gene sequence:
>558_bases ATGTTTTCCGCCCTTCACGCCAACAAACCGGCCCAGCTTATCTTGGGACTCGTAATCGGCTTTTTGTTCGGATTCCTTCT TCAGAAGGGCAATGTCACCGAGTACGATGTGATTGTGGGGCAGCTGCTGTTCCGAAACTTCACCGTCATCAAGATCATGG TGACCGCCATGTTGACGGGGATGATCGGCGTTCACCTGCTCCGCAGCCTCGGCTTTGCCCAGCTCCACCCCAAGCCCGGC TCACTGGGGATGACGCTGGTGGGAGGTCTCATCTTCGGCGTCGGCTTCGCCGTCCTGGGCTACTGCCCCGGCACCATCGC CGCGGCTGTGGCACAGGGAAAGATGGACGCCTTCGTGGGCGGGATGTCGGGGATCATCATCGGTGCAGGACTCTACGCTC ACTCCTTTCCCTACCTGTCCAGAACCATTCTTCCCAAGGGCGATTTCGGCACCCTCACCTTCCCGGAACTGTTGCGGGTG ACCCCTTGGGTGGTTATCCTGCCCCTGTCGGCGTTGCTGATCGGTTTACTGGTCTGGCTGGAGCGGGCCGGTCTGTGA
Upstream 100 bases:
>100_bases CACCCTGCAACTGGCGGTGAGCGGCTGGCTGGCAGTGGCGGCCTTTTTCGCCTCCGGAGCCGCAACCGCCTTCGTCAAGT ACGCTCTGGGAGGTTAGGCC
Downstream 100 bases:
>100_bases CTCCATGAGGTTGACGCCCTCCTCTTTGCTGCCCGAATGGCTCCGCTCCTATCGTCCGGCCGATCTACTCCCGGATCTGG CGGCAGGCGCAGTGGTTGCG
Product: YeeE/YedE family protein
Products: NA
Alternate protein names: Rhodanese Domain-Containing Protein
Number of amino acids: Translated: 185; Mature: 185
Protein sequence:
>185_residues MFSALHANKPAQLILGLVIGFLFGFLLQKGNVTEYDVIVGQLLFRNFTVIKIMVTAMLTGMIGVHLLRSLGFAQLHPKPG SLGMTLVGGLIFGVGFAVLGYCPGTIAAAVAQGKMDAFVGGMSGIIIGAGLYAHSFPYLSRTILPKGDFGTLTFPELLRV TPWVVILPLSALLIGLLVWLERAGL
Sequences:
>Translated_185_residues MFSALHANKPAQLILGLVIGFLFGFLLQKGNVTEYDVIVGQLLFRNFTVIKIMVTAMLTGMIGVHLLRSLGFAQLHPKPG SLGMTLVGGLIFGVGFAVLGYCPGTIAAAVAQGKMDAFVGGMSGIIIGAGLYAHSFPYLSRTILPKGDFGTLTFPELLRV TPWVVILPLSALLIGLLVWLERAGL >Mature_185_residues MFSALHANKPAQLILGLVIGFLFGFLLQKGNVTEYDVIVGQLLFRNFTVIKIMVTAMLTGMIGVHLLRSLGFAQLHPKPG SLGMTLVGGLIFGVGFAVLGYCPGTIAAAVAQGKMDAFVGGMSGIIIGAGLYAHSFPYLSRTILPKGDFGTLTFPELLRV TPWVVILPLSALLIGLLVWLERAGL
Specific function: Unknown
COG id: COG2391
COG function: function code R; Predicted transporter component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19628; Mature: 19628
Theoretical pI: Translated: 10.11; Mature: 10.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSALHANKPAQLILGLVIGFLFGFLLQKGNVTEYDVIVGQLLFRNFTVIKIMVTAMLTG CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH MIGVHLLRSLGFAQLHPKPGSLGMTLVGGLIFGVGFAVLGYCPGTIAAAVAQGKMDAFVG HHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHC GMSGIIIGAGLYAHSFPYLSRTILPKGDFGTLTFPELLRVTPWVVILPLSALLIGLLVWL CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHH ERAGL HHCCC >Mature Secondary Structure MFSALHANKPAQLILGLVIGFLFGFLLQKGNVTEYDVIVGQLLFRNFTVIKIMVTAMLTG CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH MIGVHLLRSLGFAQLHPKPGSLGMTLVGGLIFGVGFAVLGYCPGTIAAAVAQGKMDAFVG HHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHC GMSGIIIGAGLYAHSFPYLSRTILPKGDFGTLTFPELLRVTPWVVILPLSALLIGLLVWL CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHH ERAGL HHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA