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The map label for this gene is 39997394

Identifier: 39997394

GI number: 39997394

Start: 2513760

End: 2514674

Strand: Direct

Name: 39997394

Synonym: GSU2296

Alternate gene names: NA

Gene position: 2513760-2514674 (Clockwise)

Preceding gene: 39997392

Following gene: 39997397

Centisome position: 65.91

GC content: 56.61

Gene sequence:

>915_bases
ATGGATATTTCCGGACGCGACGTGGAAACCCGGCTTACCCTGGCACGGGAATTCATGTCTGGGGTCGACGAACTGCCGAC
CGTCCCTGACATTGTCTTAAGAATAGCAGGCAAGCTTAATGACCCCGACGTCGCCATCGACGAGGTGGCGGACTTGCTTT
TGCAGGACCAGGTACTGACCGCCCGGGTTGTGCACCTGGCCAACTCACCGCTTTACAGTGCCGCACGCCCGATCAGCTCC
ATCAGGGATGCAGTCATTTACCTGGGTCTCGACCTGCTCAGGGAAGCGATTTTCACCTGCGCCATCGTGGACCTTTTCAA
AACGGGCAAAGGCCCCCTCAACCGATCAACGCTCTGGGCGCACTCTCTGGGCGTTGCCCGCATTGCCAAGCTCATTGCCG
AACGCACCGGATTTCTCAATCCCGTCAACGTCTACGTGGCTGGGTTGCTCCACGACGTGGGCGAAGTTTTCATCAATTTT
TTCAGGGGCAAGGAGTTTTCACAGGTAGTCACGCTGGTCGATGAGGAAAAAATTACCTTCGGTCAGGCAGAAGAGAGGCT
GTTCGGGACTTCTCATTGCGAGGTGGGCTTCGCTTTGGCCAAGCGGTGGAGCCTGAACGAATTTATCTGCGACACCATCC
TCTATCACCATGACATCGAGGCGGTTCCCTACAAGCAGGCCGCCATCGTGGCGATGGTCGCCTTTGCGGACGAATACTGC
ACCCTGCGACGACTTGGATTCGAGGGGCACAAACCGGTTGATTCGGTCCGCACGCTTCTCGAAAACCACCCGTCGTGGGG
CGTTATTCGCAGGTCACTGGGTGGGTCGGACTTTGACGAGAAACTGATTGTTGCCGAACTTGACAGCTCCATCGTTGAAA
TTCGGGCTGCCGTCGACGAACTGTTCCTCCTCTGA

Upstream 100 bases:

>100_bases
CTTTTTACCGTGCACACGGGGTGTCGAACGGGCTAATGTAATGTTAACTAGTGGAAATAGGGGCAATAATATGGTATGGT
GAGTGGCATTGGAGGCTGTG

Downstream 100 bases:

>100_bases
GCTATCCCCGTCCCTCCCCCGCGCACCGCTGAACACATCATTTCCTTCCCAACCCGACCGCTATCAGATTGAGAAGTAGA
ACACAGCACCGGCGCCGGGT

Product: HD domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 304; Mature: 304

Protein sequence:

>304_residues
MDISGRDVETRLTLAREFMSGVDELPTVPDIVLRIAGKLNDPDVAIDEVADLLLQDQVLTARVVHLANSPLYSAARPISS
IRDAVIYLGLDLLREAIFTCAIVDLFKTGKGPLNRSTLWAHSLGVARIAKLIAERTGFLNPVNVYVAGLLHDVGEVFINF
FRGKEFSQVVTLVDEEKITFGQAEERLFGTSHCEVGFALAKRWSLNEFICDTILYHHDIEAVPYKQAAIVAMVAFADEYC
TLRRLGFEGHKPVDSVRTLLENHPSWGVIRRSLGGSDFDEKLIVAELDSSIVEIRAAVDELFLL

Sequences:

>Translated_304_residues
MDISGRDVETRLTLAREFMSGVDELPTVPDIVLRIAGKLNDPDVAIDEVADLLLQDQVLTARVVHLANSPLYSAARPISS
IRDAVIYLGLDLLREAIFTCAIVDLFKTGKGPLNRSTLWAHSLGVARIAKLIAERTGFLNPVNVYVAGLLHDVGEVFINF
FRGKEFSQVVTLVDEEKITFGQAEERLFGTSHCEVGFALAKRWSLNEFICDTILYHHDIEAVPYKQAAIVAMVAFADEYC
TLRRLGFEGHKPVDSVRTLLENHPSWGVIRRSLGGSDFDEKLIVAELDSSIVEIRAAVDELFLL
>Mature_304_residues
MDISGRDVETRLTLAREFMSGVDELPTVPDIVLRIAGKLNDPDVAIDEVADLLLQDQVLTARVVHLANSPLYSAARPISS
IRDAVIYLGLDLLREAIFTCAIVDLFKTGKGPLNRSTLWAHSLGVARIAKLIAERTGFLNPVNVYVAGLLHDVGEVFINF
FRGKEFSQVVTLVDEEKITFGQAEERLFGTSHCEVGFALAKRWSLNEFICDTILYHHDIEAVPYKQAAIVAMVAFADEYC
TLRRLGFEGHKPVDSVRTLLENHPSWGVIRRSLGGSDFDEKLIVAELDSSIVEIRAAVDELFLL

Specific function: Unknown

COG id: COG1639

COG function: function code T; Predicted signal transduction protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR013976 [H]

Pfam domain/function: PF02518 HATPase_c; PF08668 HDOD [H]

EC number: NA

Molecular weight: Translated: 33737; Mature: 33737

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDISGRDVETRLTLAREFMSGVDELPTVPDIVLRIAGKLNDPDVAIDEVADLLLQDQVLT
CCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
ARVVHLANSPLYSAARPISSIRDAVIYLGLDLLREAIFTCAIVDLFKTGKGPLNRSTLWA
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
HSLGVARIAKLIAERTGFLNPVNVYVAGLLHDVGEVFINFFRGKEFSQVVTLVDEEKITF
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCC
GQAEERLFGTSHCEVGFALAKRWSLNEFICDTILYHHDIEAVPYKQAAIVAMVAFADEYC
CCHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
TLRRLGFEGHKPVDSVRTLLENHPSWGVIRRSLGGSDFDEKLIVAELDSSIVEIRAAVDE
HHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH
LFLL
HHCC
>Mature Secondary Structure
MDISGRDVETRLTLAREFMSGVDELPTVPDIVLRIAGKLNDPDVAIDEVADLLLQDQVLT
CCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
ARVVHLANSPLYSAARPISSIRDAVIYLGLDLLREAIFTCAIVDLFKTGKGPLNRSTLWA
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
HSLGVARIAKLIAERTGFLNPVNVYVAGLLHDVGEVFINFFRGKEFSQVVTLVDEEKITF
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCC
GQAEERLFGTSHCEVGFALAKRWSLNEFICDTILYHHDIEAVPYKQAAIVAMVAFADEYC
CCHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
TLRRLGFEGHKPVDSVRTLLENHPSWGVIRRSLGGSDFDEKLIVAELDSSIVEIRAAVDE
HHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH
LFLL
HHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9665876 [H]