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The map label for this gene is yiaN [C]

Identifier: 39997155

GI number: 39997155

Start: 2257785

End: 2259050

Strand: Direct

Name: yiaN [C]

Synonym: GSU2057

Alternate gene names: 39997155

Gene position: 2257785-2259050 (Clockwise)

Preceding gene: 39997154

Following gene: 304569793

Centisome position: 59.2

GC content: 62.32

Gene sequence:

>1266_bases
ATGTTTTTCATGCTGTTCGTACTGCGGATTCCCGCAGCCTTCACCCTCATGATGGTCGGTTTTCTCGGCATCGCCACGGT
CACCACCTGGGACGCGGCCCTGGCCATGCTCGGCAGCGAACTCTGGGGCAGCTTTTCCAACTACGGCCTCACGGTCATTC
CCCTGTTCATTCTGGTGGGGGAAATCGTCCATTACGCCGGCTACAACAACAGTCTCTACCACGCTACCTACAAGTGGTTC
GGCCACAAGCGCGGCGGCCTTGCCATGACCACGATCCTGGCATCGGCGGCCTTCTCGGCCATCAGCGGCTCCAACACCGC
CACCGCCGCCACCATGAGCGCCGTGGCGATTCCGGCCATGAAAGAATACAAGTACCATCCGCTGCTCAACGCCGGCTCCG
TGGCTGCCGGCGCGACCCTGGGGGTCCTGATCCCTCCCAGCATCGTACTGGTGGTCTACGGGCTCTACACGGGCCAGTCC
ATCGGCAAGCTCTTCTTCGGCAATGTCATCCCCAGCGCCATCCTGACGATCCTCATCCTCCTGACCGTAGTCTGGATCTG
CCGCCGCCACCCGGACTGGGGCCCCGAGGGGCCCAGAAGCGGCTGGGGGGAGCGGTTTGCCGCCCTGCCCGAGGCCATCG
ATATCCTGATCCTCTTCGCCATCATCATGTACGCCCTGTTCACCGGCGTGGTGACCGCCACCGAGGCGGCGGCAGTGAGC
TGCTTCCTGGCTCTCGTGATCTGCGGTCTGCGCAGAAAGCTCACCTGGAAGAAGCTGACCGGGGCATTAGTGGACACCCT
GCGCATCTCCTGCATGGTGTTCATGATCGTGGCCGGCGCGGTCATCTTCGCCAAGTTCCTGACCATCACGCGGCTCCCCT
ATGAAACCGCCGAGTGGATCAGCTCCCTGGATCTTCCCCGCTGGATGGTCCTCTGGGTCATCCTGGCCTGCTACATCATC
GGCGGCTGTATCATGGACGCCCTGGCGTTCCTGCTGGTGTCGCTCCCCATCTTCTACCCGCTGGTGACCCAACTGGGCTA
CGACCCGATCTGGTTCGGCCAGGTGATCACCATCGTGACCACCATGGGGTCCATCATGCCCCCCATCGGCATCTGCTGCT
ACGTGGTATCCGGCATGTCGGGCATCCCTCTCGGCACGGTCTTTCGTAGCGGCCTCTACTACATGCCGTCCTACATCGCT
TCCATCGCAATCCTCATGGTGTCCCCCTACTGGACGGTGCTCGTGCTGGCCGACCTAGTGAAGTAA

Upstream 100 bases:

>100_bases
TGGCCGGGGTGTTGTTCATCGATTGCATGAAAACGGTATTGCGCGGTAAGGAGAGTGAGGAGTGAGCGGTCCCATTGTCG
GCGTCTACGGCATCTGTGCC

Downstream 100 bases:

>100_bases
CGGGTCCGTGACCGCACAGCCGGAAAAATTGTTAAAGTTTTCCGGCTGCTGGGCGATGAGAAAACTCAGAAACCACTGAT
CAAGGGGAACGCCCATGTCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 421; Mature: 421

Protein sequence:

>421_residues
MFFMLFVLRIPAAFTLMMVGFLGIATVTTWDAALAMLGSELWGSFSNYGLTVIPLFILVGEIVHYAGYNNSLYHATYKWF
GHKRGGLAMTTILASAAFSAISGSNTATAATMSAVAIPAMKEYKYHPLLNAGSVAAGATLGVLIPPSIVLVVYGLYTGQS
IGKLFFGNVIPSAILTILILLTVVWICRRHPDWGPEGPRSGWGERFAALPEAIDILILFAIIMYALFTGVVTATEAAAVS
CFLALVICGLRRKLTWKKLTGALVDTLRISCMVFMIVAGAVIFAKFLTITRLPYETAEWISSLDLPRWMVLWVILACYII
GGCIMDALAFLLVSLPIFYPLVTQLGYDPIWFGQVITIVTTMGSIMPPIGICCYVVSGMSGIPLGTVFRSGLYYMPSYIA
SIAILMVSPYWTVLVLADLVK

Sequences:

>Translated_421_residues
MFFMLFVLRIPAAFTLMMVGFLGIATVTTWDAALAMLGSELWGSFSNYGLTVIPLFILVGEIVHYAGYNNSLYHATYKWF
GHKRGGLAMTTILASAAFSAISGSNTATAATMSAVAIPAMKEYKYHPLLNAGSVAAGATLGVLIPPSIVLVVYGLYTGQS
IGKLFFGNVIPSAILTILILLTVVWICRRHPDWGPEGPRSGWGERFAALPEAIDILILFAIIMYALFTGVVTATEAAAVS
CFLALVICGLRRKLTWKKLTGALVDTLRISCMVFMIVAGAVIFAKFLTITRLPYETAEWISSLDLPRWMVLWVILACYII
GGCIMDALAFLLVSLPIFYPLVTQLGYDPIWFGQVITIVTTMGSIMPPIGICCYVVSGMSGIPLGTVFRSGLYYMPSYIA
SIAILMVSPYWTVLVLADLVK
>Mature_421_residues
MFFMLFVLRIPAAFTLMMVGFLGIATVTTWDAALAMLGSELWGSFSNYGLTVIPLFILVGEIVHYAGYNNSLYHATYKWF
GHKRGGLAMTTILASAAFSAISGSNTATAATMSAVAIPAMKEYKYHPLLNAGSVAAGATLGVLIPPSIVLVVYGLYTGQS
IGKLFFGNVIPSAILTILILLTVVWICRRHPDWGPEGPRSGWGERFAALPEAIDILILFAIIMYALFTGVVTATEAAAVS
CFLALVICGLRRKLTWKKLTGALVDTLRISCMVFMIVAGAVIFAKFLTITRLPYETAEWISSLDLPRWMVLWVILACYII
GGCIMDALAFLLVSLPIFYPLVTQLGYDPIWFGQVITIVTTMGSIMPPIGICCYVVSGMSGIPLGTVFRSGLYYMPSYIA
SIAILMVSPYWTVLVLADLVK

Specific function: Unknown

COG id: COG1593

COG function: function code G; TRAP-type C4-dicarboxylate transport system, large permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TRAP transporter large permease family [H]

Homologues:

Organism=Escherichia coli, GI48994950, Length=346, Percent_Identity=31.7919075144509, Blast_Score=142, Evalue=3e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010656
- InterPro:   IPR004681 [H]

Pfam domain/function: PF06808 DctM [H]

EC number: NA

Molecular weight: Translated: 45679; Mature: 45679

Theoretical pI: Translated: 8.51; Mature: 8.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFFMLFVLRIPAAFTLMMVGFLGIATVTTWDAALAMLGSELWGSFSNYGLTVIPLFILVG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHH
EIVHYAGYNNSLYHATYKWFGHKRGGLAMTTILASAAFSAISGSNTATAATMSAVAIPAM
HHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
KEYKYHPLLNAGSVAAGATLGVLIPPSIVLVVYGLYTGQSIGKLFFGNVIPSAILTILIL
HHCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
LTVVWICRRHPDWGPEGPRSGWGERFAALPEAIDILILFAIIMYALFTGVVTATEAAAVS
HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CFLALVICGLRRKLTWKKLTGALVDTLRISCMVFMIVAGAVIFAKFLTITRLPYETAEWI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
SSLDLPRWMVLWVILACYIIGGCIMDALAFLLVSLPIFYPLVTQLGYDPIWFGQVITIVT
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
TMGSIMPPIGICCYVVSGMSGIPLGTVFRSGLYYMPSYIASIAILMVSPYWTVLVLADLV
HHHHHCCHHHHHHHHHCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
K
C
>Mature Secondary Structure
MFFMLFVLRIPAAFTLMMVGFLGIATVTTWDAALAMLGSELWGSFSNYGLTVIPLFILVG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHH
EIVHYAGYNNSLYHATYKWFGHKRGGLAMTTILASAAFSAISGSNTATAATMSAVAIPAM
HHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
KEYKYHPLLNAGSVAAGATLGVLIPPSIVLVVYGLYTGQSIGKLFFGNVIPSAILTILIL
HHCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
LTVVWICRRHPDWGPEGPRSGWGERFAALPEAIDILILFAIIMYALFTGVVTATEAAAVS
HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CFLALVICGLRRKLTWKKLTGALVDTLRISCMVFMIVAGAVIFAKFLTITRLPYETAEWI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
SSLDLPRWMVLWVILACYIIGGCIMDALAFLLVSLPIFYPLVTQLGYDPIWFGQVITIVT
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
TMGSIMPPIGICCYVVSGMSGIPLGTVFRSGLYYMPSYIASIAILMVSPYWTVLVLADLV
HHHHHCCHHHHHHHHHCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
K
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]