Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
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Accession | NC_002939 |
Length | 3,814,139 |
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The map label for this gene is 39997108
Identifier: 39997108
GI number: 39997108
Start: 2203228
End: 2203662
Strand: Direct
Name: 39997108
Synonym: GSU2010
Alternate gene names: NA
Gene position: 2203228-2203662 (Clockwise)
Preceding gene: 39997107
Following gene: 39997112
Centisome position: 57.76
GC content: 54.71
Gene sequence:
>435_bases ATGACTAAAGTAGGAACCTGGATGACGAAGAATCCCGTCACCATCGAAAAGGACGCCACAGTCATTGAGGCGGTCCATCT GATGAAGGAAAAGAGCATCCGCCGGTTGCCGGTAATGGACAAGGAAACGATCGTGGGAATCCTCACCGAGAAGATGGTGG CCGATTTCAGACCGTCCAAGGCCACGTCGCTGGATACCTGGGAGGTCCACTACATTCTTTCCAAAACCTCGGTCACCGAG GCCATGAATCCGAAACCCTACAAGGTAAAACCCGACACCGATCTGACCGAGGCGGCCCAACTTCTCCACGATCGCAAACT CAATGGCGTCCTGGTGGTGGACGACAACGACCGGCTGGTCGGAATCCTCACCGTCACCAACGCTCTTGAGGCACTGATCG AGATCTGCAAGGACCCGGATGCCTGCAAGAAATAA
Upstream 100 bases:
>100_bases CAGGGTTGTCCTCTCCGGCACCGGTGAGGCTCTCCTGAACGACGAACATGTGAAGAAAGCATTCCTGGGAATGTAGAGGC AACCATAGGAGGATACTGAC
Downstream 100 bases:
>100_bases GTCGGCACCCTGGGCTCACGGCCCGGACTGGCCAGACAACTCACAAACCGCTTGAAAAGGAAAAAGGGGACACGTCAGTG ACGGCCCCCTTTTTCCTTTT
Product: CBS domain-containing protein
Products: NA
Alternate protein names: CBS Domain Containing Membrane Protein; CBS Domain Containing Protein; Signal Transduction Protein With CBS Domains; Signal Transduction Protein; CBS Domain Protein/ACT Domain Protein; AcuB Family Protein; Acetoin Utilization Protein; Signal-Transduction Protein; Acetoin Utilization Protein AcuB; Acetoin Utilization Protein Acetoin Dehydrogenase; CBS Domain Pair-Containing Protein; CBS Domain Protein; Transcriptional Regulator; XRE Family Transcriptional Regulator; Signal Transduction Protein With Cbs Domains; Acetoin Utilization AcuB Protein; Acetoin Dehydrogenase AcuB; Acetoin Utilization Protein Truncated; Cbs Domain Containing Membrane Protein; Acetoin Utilization /CBS Domain-Containing Protein
Number of amino acids: Translated: 144; Mature: 143
Protein sequence:
>144_residues MTKVGTWMTKNPVTIEKDATVIEAVHLMKEKSIRRLPVMDKETIVGILTEKMVADFRPSKATSLDTWEVHYILSKTSVTE AMNPKPYKVKPDTDLTEAAQLLHDRKLNGVLVVDDNDRLVGILTVTNALEALIEICKDPDACKK
Sequences:
>Translated_144_residues MTKVGTWMTKNPVTIEKDATVIEAVHLMKEKSIRRLPVMDKETIVGILTEKMVADFRPSKATSLDTWEVHYILSKTSVTE AMNPKPYKVKPDTDLTEAAQLLHDRKLNGVLVVDDNDRLVGILTVTNALEALIEICKDPDACKK >Mature_143_residues TKVGTWMTKNPVTIEKDATVIEAVHLMKEKSIRRLPVMDKETIVGILTEKMVADFRPSKATSLDTWEVHYILSKTSVTEA MNPKPYKVKPDTDLTEAAQLLHDRKLNGVLVVDDNDRLVGILTVTNALEALIEICKDPDACKK
Specific function: Unknown
COG id: COG0517
COG function: function code R; FOG: CBS domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16132; Mature: 16001
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKVGTWMTKNPVTIEKDATVIEAVHLMKEKSIRRLPVMDKETIVGILTEKMVADFRPSK CCCCCCEECCCCEEECCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCC ATSLDTWEVHYILSKTSVTEAMNPKPYKVKPDTDLTEAAQLLHDRKLNGVLVVDDNDRLV CCCCCCEEEEEEEECCHHHHCCCCCCEEECCCCCHHHHHHHHHHCCCCCEEEEECCCCEE GILTVTNALEALIEICKDPDACKK EEEEHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure TKVGTWMTKNPVTIEKDATVIEAVHLMKEKSIRRLPVMDKETIVGILTEKMVADFRPSK CCCCCEECCCCEEECCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCC ATSLDTWEVHYILSKTSVTEAMNPKPYKVKPDTDLTEAAQLLHDRKLNGVLVVDDNDRLV CCCCCCEEEEEEEECCHHHHCCCCCCEEECCCCCHHHHHHHHHHCCCCCEEEEECCCCEE GILTVTNALEALIEICKDPDACKK EEEEHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA