| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 39995478
Identifier: 39995478
GI number: 39995478
Start: 401449
End: 403206
Strand: Reverse
Name: 39995478
Synonym: GSU0370
Alternate gene names: NA
Gene position: 403206-401449 (Counterclockwise)
Preceding gene: 39995479
Following gene: 39995477
Centisome position: 10.57
GC content: 69.85
Gene sequence:
>1758_bases ATGATCGTGACTCAGGAAATAGCCCGGATCGCCCAGGCCCTCCTCAAGGATTCGACGTACTCGCTGGTGGAGGCCCGGTG GCAGACCCTGACGCCCCTCAACCTGACCCCGGGCCAGATGGTACAGGCGGAGGTGCTGGCCAACCTGCCGGACAGCCGCT ACCTGATCCGGCTGGCAAACCAGCTCCTGCGCATGGAGATCCCCCTCAACCTCCAGCCGGGGCAGACCGTGGAGTTGACC TTCGTCTCGGAGGAGCCGCGCCTCGTCTTCGCCCTGTCCAAGGAGGCGAACTCGGGGGTACCGGTCCGGATCAGCGACAC CGGCCGATGGCTCAATCAGCTGGCCACGTCCAGAAATGACGCGGTCCAGTCCACGCCGCTCCCCCGGCCGTCGATCATTC TACAGGAGCCGCCACGGGATACGGGCCGTCTGGCTGAAGGGCTGCGCAACGCCCTCACCCGTAGCGGCGTTTTCTATGAG TCGCACCTCTCCCAGTGGGTCAAGGGGGAGCGCCCCTTGGCCGATCTCCTCCGGGAGCCCCAGGGGTCCCTCTCACGGCT TGCCGTGGCCACGACTTCCGGCGGCAACAACACCTCACCCGCTCCGGCAAACGGCGGTGCGCCACCCCAGCAGAACGCCG CGCCCCCGGCCTCCCAGTCGCCGGGAGGACCACCCGCGGCCACAACCGATGCGGGGCAAAAGCCCGCTGCTGCCCCGCTA CCAGCAGCAAACCAGCCCACGGGCAGTCAACCGGCGGCCGGCGGGGGAAACGCACCCTCAACCGTGCCTGCCTCTGCCGG CACGGGCACTACCGGCAGCCTCGGTTCGCCGTCAGTCGCCACGCCAGCCACCGGAGACGCACCACAGGCGCCGCACCAGT CCGGCACACCGGCACCCTCCGTCACCACGACACCAGCCGGTGGTGCCCCCCCCACGGACCAGGCGCCTCCACCGCTGCGC CCCGACGGCGGCACCGCAGCCCTCCCTGATACCGATCAGGCAACCCCGCGACCCCAAGGGCCGGCGCCGGACGGGACACG CCCTCCGACACCCCAGGAGCCCCTTCGTCCCGATTCGACGCCGGTAGCCGGCAAGCCGCTCCCCGCACCATCTCAACCGG ACCAGTCATCACCCCAGGGGCCGACCCTCCGGCAAGTGCCCCTTCCCGACCCCGCCGCCCAGAACTCGCCGACCGCGCCC GGGACCACCGTCGTTTCCCAGGCGAGAGGCGAGCGTATCGCCGTTGACCAGCACGCGGCATCCCAGCCCCGTGCGCCCAT GGCTCTCGCTGCCGATGGCGACGGGGTTGCGGTGGCGGCCCGTGCCGGAGACCCGGCGGCTACGGAACGGGCCGGGGGAC TCCGTCATATCCCGCCCCCTCCCCAGGGAGGGGTGGAGCCCCAGACTATCCCTATCATCAAGGAGCAGCTCACGACACTG GCCACGGGGCAGTTCACCTGGCACGGACAGGTCTGGCCCGGCCAGGATATGGAATGGAAGGTGGAGGAGCGCGAGGCCGA CGGACGGGGCTCCTCAGCGGAGCGGAGCTGGCAGACGGAAGTGGCCCTTGACCTGCCCCGACTGGGATCGGTCCGGGCGA CCCTGAGCCTCGGCAGTTCCGGGGTAACGGTCAATCTCGCGGCCCGGAACGAGGAAACCATAGCGGCCATGAAAGAGGGA AGGCCACGCCTCGAAGAGGCGCTGGACGCAGCCGGCATCCGCATGACCGGTTTCAGGGTGAGCCATGACGACGAATGA
Upstream 100 bases:
>100_bases CCGCCATCCCGAACTGGGACCGGTTTACGAACAGGGTCTGCTCGTCTGGGGCTGAGCGGCAACGGCTTCAGTTCTGCCCG GTTCCGCCGATAAGTAATCC
Downstream 100 bases:
>100_bases CCGGGACCGCAAGGCTGTAGCCCTCAGCTACCGCGAAGGGCACTACGCCCCCCAGGTGGTGGCCAAGGGGTACGGCGTCA CCGCAGAGGCCATCATCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 585; Mature: 585
Protein sequence:
>585_residues MIVTQEIARIAQALLKDSTYSLVEARWQTLTPLNLTPGQMVQAEVLANLPDSRYLIRLANQLLRMEIPLNLQPGQTVELT FVSEEPRLVFALSKEANSGVPVRISDTGRWLNQLATSRNDAVQSTPLPRPSIILQEPPRDTGRLAEGLRNALTRSGVFYE SHLSQWVKGERPLADLLREPQGSLSRLAVATTSGGNNTSPAPANGGAPPQQNAAPPASQSPGGPPAATTDAGQKPAAAPL PAANQPTGSQPAAGGGNAPSTVPASAGTGTTGSLGSPSVATPATGDAPQAPHQSGTPAPSVTTTPAGGAPPTDQAPPPLR PDGGTAALPDTDQATPRPQGPAPDGTRPPTPQEPLRPDSTPVAGKPLPAPSQPDQSSPQGPTLRQVPLPDPAAQNSPTAP GTTVVSQARGERIAVDQHAASQPRAPMALAADGDGVAVAARAGDPAATERAGGLRHIPPPPQGGVEPQTIPIIKEQLTTL ATGQFTWHGQVWPGQDMEWKVEEREADGRGSSAERSWQTEVALDLPRLGSVRATLSLGSSGVTVNLAARNEETIAAMKEG RPRLEEALDAAGIRMTGFRVSHDDE
Sequences:
>Translated_585_residues MIVTQEIARIAQALLKDSTYSLVEARWQTLTPLNLTPGQMVQAEVLANLPDSRYLIRLANQLLRMEIPLNLQPGQTVELT FVSEEPRLVFALSKEANSGVPVRISDTGRWLNQLATSRNDAVQSTPLPRPSIILQEPPRDTGRLAEGLRNALTRSGVFYE SHLSQWVKGERPLADLLREPQGSLSRLAVATTSGGNNTSPAPANGGAPPQQNAAPPASQSPGGPPAATTDAGQKPAAAPL PAANQPTGSQPAAGGGNAPSTVPASAGTGTTGSLGSPSVATPATGDAPQAPHQSGTPAPSVTTTPAGGAPPTDQAPPPLR PDGGTAALPDTDQATPRPQGPAPDGTRPPTPQEPLRPDSTPVAGKPLPAPSQPDQSSPQGPTLRQVPLPDPAAQNSPTAP GTTVVSQARGERIAVDQHAASQPRAPMALAADGDGVAVAARAGDPAATERAGGLRHIPPPPQGGVEPQTIPIIKEQLTTL ATGQFTWHGQVWPGQDMEWKVEEREADGRGSSAERSWQTEVALDLPRLGSVRATLSLGSSGVTVNLAARNEETIAAMKEG RPRLEEALDAAGIRMTGFRVSHDDE >Mature_585_residues MIVTQEIARIAQALLKDSTYSLVEARWQTLTPLNLTPGQMVQAEVLANLPDSRYLIRLANQLLRMEIPLNLQPGQTVELT FVSEEPRLVFALSKEANSGVPVRISDTGRWLNQLATSRNDAVQSTPLPRPSIILQEPPRDTGRLAEGLRNALTRSGVFYE SHLSQWVKGERPLADLLREPQGSLSRLAVATTSGGNNTSPAPANGGAPPQQNAAPPASQSPGGPPAATTDAGQKPAAAPL PAANQPTGSQPAAGGGNAPSTVPASAGTGTTGSLGSPSVATPATGDAPQAPHQSGTPAPSVTTTPAGGAPPTDQAPPPLR PDGGTAALPDTDQATPRPQGPAPDGTRPPTPQEPLRPDSTPVAGKPLPAPSQPDQSSPQGPTLRQVPLPDPAAQNSPTAP GTTVVSQARGERIAVDQHAASQPRAPMALAADGDGVAVAARAGDPAATERAGGLRHIPPPPQGGVEPQTIPIIKEQLTTL ATGQFTWHGQVWPGQDMEWKVEEREADGRGSSAERSWQTEVALDLPRLGSVRATLSLGSSGVTVNLAARNEETIAAMKEG RPRLEEALDAAGIRMTGFRVSHDDE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60495; Mature: 60495
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVTQEIARIAQALLKDSTYSLVEARWQTLTPLNLTPGQMVQAEVLANLPDSRYLIRLAN CCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHH QLLRMEIPLNLQPGQTVELTFVSEEPRLVFALSKEANSGVPVRISDTGRWLNQLATSRND HHHEEECCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCEEECCHHHHHHHHHHCCCC AVQSTPLPRPSIILQEPPRDTGRLAEGLRNALTRSGVFYESHLSQWVKGERPLADLLREP CHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHCC QGSLSRLAVATTSGGNNTSPAPANGGAPPQQNAAPPASQSPGGPPAATTDAGQKPAAAPL CCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PAANQPTGSQPAAGGGNAPSTVPASAGTGTTGSLGSPSVATPATGDAPQAPHQSGTPAPS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC VTTTPAGGAPPTDQAPPPLRPDGGTAALPDTDQATPRPQGPAPDGTRPPTPQEPLRPDST EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PVAGKPLPAPSQPDQSSPQGPTLRQVPLPDPAAQNSPTAPGTTVVSQARGERIAVDQHAA CCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHCCCEEEECCHHC SQPRAPMALAADGDGVAVAARAGDPAATERAGGLRHIPPPPQGGVEPQTIPIIKEQLTTL CCCCCCEEEEECCCCEEEEECCCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH ATGQFTWHGQVWPGQDMEWKVEEREADGRGSSAERSWQTEVALDLPRLGSVRATLSLGSS HCCCEEEECCCCCCCCCCEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEEECCC GVTVNLAARNEETIAAMKEGRPRLEEALDAAGIRMTGFRVSHDDE CCEEEEECCCCHHHHHHHCCCHHHHHHHHHCCEEEEEEEECCCCC >Mature Secondary Structure MIVTQEIARIAQALLKDSTYSLVEARWQTLTPLNLTPGQMVQAEVLANLPDSRYLIRLAN CCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHH QLLRMEIPLNLQPGQTVELTFVSEEPRLVFALSKEANSGVPVRISDTGRWLNQLATSRND HHHEEECCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCEEECCHHHHHHHHHHCCCC AVQSTPLPRPSIILQEPPRDTGRLAEGLRNALTRSGVFYESHLSQWVKGERPLADLLREP CHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHCC QGSLSRLAVATTSGGNNTSPAPANGGAPPQQNAAPPASQSPGGPPAATTDAGQKPAAAPL CCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PAANQPTGSQPAAGGGNAPSTVPASAGTGTTGSLGSPSVATPATGDAPQAPHQSGTPAPS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC VTTTPAGGAPPTDQAPPPLRPDGGTAALPDTDQATPRPQGPAPDGTRPPTPQEPLRPDST EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PVAGKPLPAPSQPDQSSPQGPTLRQVPLPDPAAQNSPTAPGTTVVSQARGERIAVDQHAA CCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHCCCEEEECCHHC SQPRAPMALAADGDGVAVAARAGDPAATERAGGLRHIPPPPQGGVEPQTIPIIKEQLTTL CCCCCCEEEEECCCCEEEEECCCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH ATGQFTWHGQVWPGQDMEWKVEEREADGRGSSAERSWQTEVALDLPRLGSVRATLSLGSS HCCCEEEECCCCCCCCCCEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEEECCC GVTVNLAARNEETIAAMKEGRPRLEEALDAAGIRMTGFRVSHDDE CCEEEEECCCCHHHHHHHCCCHHHHHHHHHCCEEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA