| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is ygiN [C]
Identifier: 39995367
GI number: 39995367
Start: 266321
End: 266611
Strand: Reverse
Name: ygiN [C]
Synonym: GSU0257
Alternate gene names: 39995367
Gene position: 266611-266321 (Counterclockwise)
Preceding gene: 39995368
Following gene: 39995361
Centisome position: 6.99
GC content: 62.54
Gene sequence:
>291_bases ATGCCGACGGTAACGGTAATAGCGGAAGTACGGGCACGGGAAGAGGCGGTCGACGCGGTCAGGGTCGAACTTCTGAAACT GGTGTCGGAAACCCGTCAGGAGGAAGGCTGCCTTGAATACCGGCTGCATCAGGACGGGGACGACCCGGCCCTGTTCATCT TCTACGAGAACTGGCAGAGTCCGGCCTGCCTGGAACGGCATCTGGGGTCCGGCCACTTCCGGGCATACCTCGCCGCGGTC GAGGGAATGATTGCCGGCAAGACGGTCCGCAGGCTGTCGGAACTCACCTGA
Upstream 100 bases:
>100_bases TCGTCTTTGAATTCGTGCGGAATGTGGAGCGGGACATCTGCCCCTTCTGCAAGGCCTATGAACGGGTTCACGGGAAAAAG TCCCACGAGAGGAGGCAGCC
Downstream 100 bases:
>100_bases AGGGTATCAACGCTTTTGATGAGGTGGTGGGGTTTGGGCCGGAGGGGTCATGCGTGGTTTCGGCGCTGTCTGCGCCGAAA CCCGGCGTCACTTCACGTAA
Product: hypothetical protein
Products: NA
Alternate protein names: Lipoprotein; Antibiotic Biosynthesis Monooxygenase Domain Protein; Antibiotic Biosynthesis Monooxygenase Family Protein
Number of amino acids: Translated: 96; Mature: 95
Protein sequence:
>96_residues MPTVTVIAEVRAREEAVDAVRVELLKLVSETRQEEGCLEYRLHQDGDDPALFIFYENWQSPACLERHLGSGHFRAYLAAV EGMIAGKTVRRLSELT
Sequences:
>Translated_96_residues MPTVTVIAEVRAREEAVDAVRVELLKLVSETRQEEGCLEYRLHQDGDDPALFIFYENWQSPACLERHLGSGHFRAYLAAV EGMIAGKTVRRLSELT >Mature_95_residues PTVTVIAEVRAREEAVDAVRVELLKLVSETRQEEGCLEYRLHQDGDDPALFIFYENWQSPACLERHLGSGHFRAYLAAVE GMIAGKTVRRLSELT
Specific function: Unknown
COG id: COG1359
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 260 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10860; Mature: 10729
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTVTVIAEVRAREEAVDAVRVELLKLVSETRQEEGCLEYRLHQDGDDPALFIFYENWQS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCEEEEEECCCCC PACLERHLGSGHFRAYLAAVEGMIAGKTVRRLSELT HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PTVTVIAEVRAREEAVDAVRVELLKLVSETRQEEGCLEYRLHQDGDDPALFIFYENWQS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCEEEEEECCCCC PACLERHLGSGHFRAYLAAVEGMIAGKTVRRLSELT HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA