| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
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The map label for this gene is 39995346
Identifier: 39995346
GI number: 39995346
Start: 244889
End: 245305
Strand: Reverse
Name: 39995346
Synonym: GSU0236
Alternate gene names: NA
Gene position: 245305-244889 (Counterclockwise)
Preceding gene: 39995347
Following gene: 39995345
Centisome position: 6.43
GC content: 68.59
Gene sequence:
>417_bases GTGCCGACCCCTCCGGCATTCCCCCTCACCGTCTTCTATGACGGCGCCTGCTCCGTCTGCGCGGCCGAAATGGCGGTCTA CCGGCGCAAAAACCACGGGGGACGGCTCGTCTTCGTGGACATCAGCGATCCCGCCTTCGACCCGTCCCCCTGGGGCATCA CCCTGGAGGCGTTCATGGCGCAGATGCACGCCATCGACCGGGATGGCCGCGCCTACCGGGGAGTGGAAGGCTTCTGGGCC ATCTGGCAGGCCTTCCCCGCCTCAACCTTCTACGGGCTCCTCGGCACCCTCGTGATGCTGCCGGGGTTCAACCTCCTGGC CCGGCTCGGCTACCGGGGATTCGCCCGCATCCGCAGGTACCTTCCCAAACGCGCATCCCGCTGCGACGGCGGCACCTGCC GCATGGACCGGCACTGA
Upstream 100 bases:
>100_bases TCCAGATCACCTACGAGATCACCGTGGAGATCGAGGGCAAGGACAAGCCCGCCTGCGTGGCCGAGCAGGTGGTGCGGGTC TATCCCTGAGGCGGCGCACC
Downstream 100 bases:
>100_bases AGCCTTCCCCGCTTTTCAAACGCCGCCCCCTGTGGTAGGATGCCCGCCTTTCCCAACTCCCCCGGAACAGAGGACTTTCC ATGGCACTGAGCGACCAGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 138; Mature: 137
Protein sequence:
>138_residues MPTPPAFPLTVFYDGACSVCAAEMAVYRRKNHGGRLVFVDISDPAFDPSPWGITLEAFMAQMHAIDRDGRAYRGVEGFWA IWQAFPASTFYGLLGTLVMLPGFNLLARLGYRGFARIRRYLPKRASRCDGGTCRMDRH
Sequences:
>Translated_138_residues MPTPPAFPLTVFYDGACSVCAAEMAVYRRKNHGGRLVFVDISDPAFDPSPWGITLEAFMAQMHAIDRDGRAYRGVEGFWA IWQAFPASTFYGLLGTLVMLPGFNLLARLGYRGFARIRRYLPKRASRCDGGTCRMDRH >Mature_137_residues PTPPAFPLTVFYDGACSVCAAEMAVYRRKNHGGRLVFVDISDPAFDPSPWGITLEAFMAQMHAIDRDGRAYRGVEGFWAI WQAFPASTFYGLLGTLVMLPGFNLLARLGYRGFARIRRYLPKRASRCDGGTCRMDRH
Specific function: Unknown
COG id: COG3011
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15484; Mature: 15353
Theoretical pI: Translated: 9.55; Mature: 9.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTPPAFPLTVFYDGACSVCAAEMAVYRRKNHGGRLVFVDISDPAFDPSPWGITLEAFMA CCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCEEHHHHHH QMHAIDRDGRAYRGVEGFWAIWQAFPASTFYGLLGTLVMLPGFNLLARLGYRGFARIRRY HHHHHCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHH LPKRASRCDGGTCRMDRH HHHHHCCCCCCCEECCCC >Mature Secondary Structure PTPPAFPLTVFYDGACSVCAAEMAVYRRKNHGGRLVFVDISDPAFDPSPWGITLEAFMA CCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCEEHHHHHH QMHAIDRDGRAYRGVEGFWAIWQAFPASTFYGLLGTLVMLPGFNLLARLGYRGFARIRRY HHHHHCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHH LPKRASRCDGGTCRMDRH HHHHHCCCCCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA