| Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
|---|---|
| Accession | NC_002939 |
| Length | 3,814,139 |
Click here to switch to the map view.
The map label for this gene is 39995248
Identifier: 39995248
GI number: 39995248
Start: 151656
End: 152354
Strand: Reverse
Name: 39995248
Synonym: GSU0137
Alternate gene names: NA
Gene position: 152354-151656 (Counterclockwise)
Preceding gene: 39995277
Following gene: 39995246
Centisome position: 3.99
GC content: 58.66
Gene sequence:
>699_bases ATGCACGACTACTACCAGTTGGTTACGGTTGCCGACCTTCCCCAGGACAACCGGCAAATTCTGGACACACTGACAGCCAT CGGCGCGGGCAAGCTGCCCAACGACCTGAGACTCCTGAACTACTACCGCTCCATACCGGTCAACTACGGCGCCACAGTGG AATCAGTGGAACGCGGCTCGGTGGAGCTGACGGTAAACCAGCAGCAGGCCATCGTCATGCAGCTGGAAAAGCAGGTGTTC CTCAAAAGCGGCCACTTCCCCAAAGACGTGCTGGCGGCCGTCACCTACGTCAATATCGACAAGAGCGTGGCCATCCTCGC CAACTTCGCCTATGCGGTGATCAGGTCGGAACGCCGTCAATTCGTGCGGGTGGAGGTCAAGGACAAAATCGAGGCAAGCT TCTCGGGGGACGGCTTCACCGTGGCCGGCCTGTTGAACGACATCTCCCTGGGAGGCGTGGCCATCTCCGCAACGATCCCC ACCCATCCCGATGCGGGCATCAAGGGGAAGGTCACGCTGCGCCTGCCCGGAGGGCCCTTTGAGATGCCAGCCCAGGTTCT GCGGGTCATCCCCGCGAAACAGACAGACCTCTGCATCATTGAGATCCAACCCGACAACCGGACTGAGAAGGGGATATCCC AATACATCTTTCAGCGCCAAGTTGAGATCATCAGGGAACTGAAGGACTCTATTTTCTAG
Upstream 100 bases:
>100_bases AGAAGCTACTCTTCGCCTTGAAAATCAATAATACACCAGCACCCCGACGGTTTACAACCAAAAGAACGCCGGGGGCGACA CCTCGCTCAAGGATGGAGTA
Downstream 100 bases:
>100_bases CAGGCGCACCACCTGCATGCCCGTCGTCCGCCCCTCCGTCGTTCGACCCTCCACATGACGCAGTTACGTCTGTGGCCATG CCCAGTCGTCGCGGCCAATC
Product: hypothetical protein
Products: NA
Alternate protein names: PilZ Domain-Containing Protein; Diguanylate Cyclase; Type Iv Pilus Assembly Pilz; Type IV Pilus Assembly Protein PilZ
Number of amino acids: Translated: 232; Mature: 232
Protein sequence:
>232_residues MHDYYQLVTVADLPQDNRQILDTLTAIGAGKLPNDLRLLNYYRSIPVNYGATVESVERGSVELTVNQQQAIVMQLEKQVF LKSGHFPKDVLAAVTYVNIDKSVAILANFAYAVIRSERRQFVRVEVKDKIEASFSGDGFTVAGLLNDISLGGVAISATIP THPDAGIKGKVTLRLPGGPFEMPAQVLRVIPAKQTDLCIIEIQPDNRTEKGISQYIFQRQVEIIRELKDSIF
Sequences:
>Translated_232_residues MHDYYQLVTVADLPQDNRQILDTLTAIGAGKLPNDLRLLNYYRSIPVNYGATVESVERGSVELTVNQQQAIVMQLEKQVF LKSGHFPKDVLAAVTYVNIDKSVAILANFAYAVIRSERRQFVRVEVKDKIEASFSGDGFTVAGLLNDISLGGVAISATIP THPDAGIKGKVTLRLPGGPFEMPAQVLRVIPAKQTDLCIIEIQPDNRTEKGISQYIFQRQVEIIRELKDSIF >Mature_232_residues MHDYYQLVTVADLPQDNRQILDTLTAIGAGKLPNDLRLLNYYRSIPVNYGATVESVERGSVELTVNQQQAIVMQLEKQVF LKSGHFPKDVLAAVTYVNIDKSVAILANFAYAVIRSERRQFVRVEVKDKIEASFSGDGFTVAGLLNDISLGGVAISATIP THPDAGIKGKVTLRLPGGPFEMPAQVLRVIPAKQTDLCIIEIQPDNRTEKGISQYIFQRQVEIIRELKDSIF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25729; Mature: 25729
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHDYYQLVTVADLPQDNRQILDTLTAIGAGKLPNDLRLLNYYRSIPVNYGATVESVERGS CCCHHEEEEEECCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCHHHHCCCC VELTVNQQQAIVMQLEKQVFLKSGHFPKDVLAAVTYVNIDKSVAILANFAYAVIRSERRQ EEEEECCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHH FVRVEVKDKIEASFSGDGFTVAGLLNDISLGGVAISATIPTHPDAGIKGKVTLRLPGGPF EEEEEEHHCEEEEECCCCEEEEEHHCCCCCCCEEEEEECCCCCCCCCCEEEEEEECCCCC EMPAQVLRVIPAKQTDLCIIEIQPDNRTEKGISQYIFQRQVEIIRELKDSIF HHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MHDYYQLVTVADLPQDNRQILDTLTAIGAGKLPNDLRLLNYYRSIPVNYGATVESVERGS CCCHHEEEEEECCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCHHHHCCCC VELTVNQQQAIVMQLEKQVFLKSGHFPKDVLAAVTYVNIDKSVAILANFAYAVIRSERRQ EEEEECCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHH FVRVEVKDKIEASFSGDGFTVAGLLNDISLGGVAISATIPTHPDAGIKGKVTLRLPGGPF EEEEEEHHCEEEEECCCCEEEEEHHCCCCCCCEEEEEECCCCCCCCCCEEEEEEECCCCC EMPAQVLRVIPAKQTDLCIIEIQPDNRTEKGISQYIFQRQVEIIRELKDSIF HHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA