| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is 38234245
Identifier: 38234245
GI number: 38234245
Start: 1709494
End: 1711068
Strand: Direct
Name: 38234245
Synonym: DIP1672
Alternate gene names: NA
Gene position: 1709494-1711068 (Clockwise)
Preceding gene: 38234240
Following gene: 38234247
Centisome position: 68.69
GC content: 50.48
Gene sequence:
>1575_bases ATGGGATTACAGCGCCAGTTGGAAGTAGAAGCGAAATACTCGGTTGACGCTACGGCAGCGGCGCCGGATATTAGTTCAGT GCCGGGCATCACTCGGGTGACTGCGCCAGAGGTTGTTCGGTTGTCTGCTACGTATTTTGATACGGAGGATTTGCGGCTTT CGCGTGCCAAAATTGCGTTACGACGCCGCACCGGTGGTCACGACGAAGGCTGGCATATTAAGGCTTCGACTCCGCAGGGG CGGAGGGAAACGCATGCTCCGTTGAGTGAGGATGTACCGCCTGAGTTGTTACAGGAGGTCCGCGCGATTGTACGAAATAG TCCACTGATTGCGGTGGCACGCGTGGATAATGAGCGGCATCTTTCTTTTGCTTCTGATTCTGAGAATCGTGTGCTTCTTG AGCTTTGCGACGATCACGTGCATTCCGTTTCGTATCTGGAAAAGGGCACGGAGCAGCGGTGGCGTGAGTGGGAAATCGAG GCTACTGCTTGTGCGCAACAATTAGGTCAAGCAGATAGTTTGTTGGAGGCTGCCGACTCAGTAGTTCGTGCTCAAGGCGC GACGGATCCGCAAAGTGGTTCCAAATTACAAAGTGCTTTAGGCGACTCGGCGTTCTATGTCCCGTCGCCTCCGCAACCTG CAGTTGTTGATTCTTCAAGCCCTGCATTCCCAGTGCTGGCTTCTTTGCAACGTGATAGTGCTGCGCTTATTCAATGGGAT CCACGTGTTCGTCGTGATGAGCCCGATGCGGTTCATCAAATGCGCGTGATAACCCGTCAGTTGCGCAGTAATCTGCACAC ATTTAGAGAGTTTTTTACTCCACATTCCACAGAAAAGCTGGAGGCCAAACTGAAAGAATTGGCAGCTGTGCTAGGGAATG CGCGGGATTGCGAAGTAGTACAGGCTCGATTCCGTTTTATTTCTGATGATCTTGCTGCTTCGTTGTTGGATGAGTCAACG AGGGATTTCCTCCATCATGGTTTGGATGCTGACTACGCCAAAGCACATCACAGGATTAATTTAGCGCTGAACGATCAACG CTACTTCGACCTTTTAAACGACATCGATAGCTTTCTAGCGTATCCTCCGCTGGTTGCTCAAACCAAGAGCACCAATTCGA GTTTTCCTGCGTTAGTGGAAAGTCTGGATGAGGCTTATGCAGCAATGCAGCGCCGATATTCCAAGGCGGCTCCGTGCTAC AAAGATTTGGAAAAATCCTTGCCCGAATATGAGGAAACATTCCATGATCTGCGTAAATCTGTTAAAAAATTCCGCTATGC TGCCGATGCGATTGGCTCTTCTACCCCATTAGCAACAAAGAAACTAGTTCGCGCTTGTAAAAAACTACAAACAGACCTCG GTGAGTTTCAGGACACGGCGACGTCTCGGGTGATGATCCATAAAGCAGCGCGACATGCCGAGCTGCGTGGAGTGTCTAGC TTCGGGCTCGGCATCGTCTACTCCTATGAGTATCAACGCGCTGTGGTTCATTTGCGTGCCGCTAAGAAAAGCTACAAAGA AGTGTCCCAAGCGTATAAGGACTTGCAAAAGAAGGCCAAGAAAAAGAAGAAGTGA
Upstream 100 bases:
>100_bases CTATTGTTTTCGCAGTATATAGGCTCTTTTGGGTGGGGGTTGCGTGGTTATTTTCATGTTTTGTTATCGCGTGTCATAAC AAACTGGTAGAACTCATGTC
Downstream 100 bases:
>100_bases TTGAGTGTTTTAATCCCACTCGTCGTCTTTTTCGTCCTCCGCATCTGCGGCTTCATTGCGTGCTTGAGCTATTTCGAGAG CATGTCGGGCTTCTTCTGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 524; Mature: 523
Protein sequence:
>524_residues MGLQRQLEVEAKYSVDATAAAPDISSVPGITRVTAPEVVRLSATYFDTEDLRLSRAKIALRRRTGGHDEGWHIKASTPQG RRETHAPLSEDVPPELLQEVRAIVRNSPLIAVARVDNERHLSFASDSENRVLLELCDDHVHSVSYLEKGTEQRWREWEIE ATACAQQLGQADSLLEAADSVVRAQGATDPQSGSKLQSALGDSAFYVPSPPQPAVVDSSSPAFPVLASLQRDSAALIQWD PRVRRDEPDAVHQMRVITRQLRSNLHTFREFFTPHSTEKLEAKLKELAAVLGNARDCEVVQARFRFISDDLAASLLDEST RDFLHHGLDADYAKAHHRINLALNDQRYFDLLNDIDSFLAYPPLVAQTKSTNSSFPALVESLDEAYAAMQRRYSKAAPCY KDLEKSLPEYEETFHDLRKSVKKFRYAADAIGSSTPLATKKLVRACKKLQTDLGEFQDTATSRVMIHKAARHAELRGVSS FGLGIVYSYEYQRAVVHLRAAKKSYKEVSQAYKDLQKKAKKKKK
Sequences:
>Translated_524_residues MGLQRQLEVEAKYSVDATAAAPDISSVPGITRVTAPEVVRLSATYFDTEDLRLSRAKIALRRRTGGHDEGWHIKASTPQG RRETHAPLSEDVPPELLQEVRAIVRNSPLIAVARVDNERHLSFASDSENRVLLELCDDHVHSVSYLEKGTEQRWREWEIE ATACAQQLGQADSLLEAADSVVRAQGATDPQSGSKLQSALGDSAFYVPSPPQPAVVDSSSPAFPVLASLQRDSAALIQWD PRVRRDEPDAVHQMRVITRQLRSNLHTFREFFTPHSTEKLEAKLKELAAVLGNARDCEVVQARFRFISDDLAASLLDEST RDFLHHGLDADYAKAHHRINLALNDQRYFDLLNDIDSFLAYPPLVAQTKSTNSSFPALVESLDEAYAAMQRRYSKAAPCY KDLEKSLPEYEETFHDLRKSVKKFRYAADAIGSSTPLATKKLVRACKKLQTDLGEFQDTATSRVMIHKAARHAELRGVSS FGLGIVYSYEYQRAVVHLRAAKKSYKEVSQAYKDLQKKAKKKKK >Mature_523_residues GLQRQLEVEAKYSVDATAAAPDISSVPGITRVTAPEVVRLSATYFDTEDLRLSRAKIALRRRTGGHDEGWHIKASTPQGR RETHAPLSEDVPPELLQEVRAIVRNSPLIAVARVDNERHLSFASDSENRVLLELCDDHVHSVSYLEKGTEQRWREWEIEA TACAQQLGQADSLLEAADSVVRAQGATDPQSGSKLQSALGDSAFYVPSPPQPAVVDSSSPAFPVLASLQRDSAALIQWDP RVRRDEPDAVHQMRVITRQLRSNLHTFREFFTPHSTEKLEAKLKELAAVLGNARDCEVVQARFRFISDDLAASLLDESTR DFLHHGLDADYAKAHHRINLALNDQRYFDLLNDIDSFLAYPPLVAQTKSTNSSFPALVESLDEAYAAMQRRYSKAAPCYK DLEKSLPEYEETFHDLRKSVKKFRYAADAIGSSTPLATKKLVRACKKLQTDLGEFQDTATSRVMIHKAARHAELRGVSSF GLGIVYSYEYQRAVVHLRAAKKSYKEVSQAYKDLQKKAKKKKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008172 - InterPro: IPR007899 - InterPro: IPR004206 [H]
Pfam domain/function: PF05235 CHAD; PF01928 CYTH [H]
EC number: NA
Molecular weight: Translated: 58683; Mature: 58551
Theoretical pI: Translated: 8.22; Mature: 8.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLQRQLEVEAKYSVDATAAAPDISSVPGITRVTAPEVVRLSATYFDTEDLRLSRAKIAL CCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCHHEEEEEHEECCHHHHHHHHHHHH RRRTGGHDEGWHIKASTPQGRRETHAPLSEDVPPELLQEVRAIVRNSPLIAVARVDNERH HHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCC LSFASDSENRVLLELCDDHVHSVSYLEKGTEQRWREWEIEATACAQQLGQADSLLEAADS CEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHH VVRAQGATDPQSGSKLQSALGDSAFYVPSPPQPAVVDSSSPAFPVLASLQRDSAALIQWD HHHHCCCCCCCCHHHHHHHHCCCEEECCCCCCCCEECCCCCCHHHHHHHCCCCCEEEEEC PRVRRDEPDAVHQMRVITRQLRSNLHTFREFFTPHSTEKLEAKLKELAAVLGNARDCEVV CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHH QARFRFISDDLAASLLDESTRDFLHHGLDADYAKAHHRINLALNDQRYFDLLNDIDSFLA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHEEEEEECCHHHHHHHHHHHHHHC YPPLVAQTKSTNSSFPALVESLDEAYAAMQRRYSKAAPCYKDLEKSLPEYEETFHDLRKS CCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHH VKKFRYAADAIGSSTPLATKKLVRACKKLQTDLGEFQDTATSRVMIHKAARHAELRGVSS HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH FGLGIVYSYEYQRAVVHLRAAKKSYKEVSQAYKDLQKKAKKKKK CCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure GLQRQLEVEAKYSVDATAAAPDISSVPGITRVTAPEVVRLSATYFDTEDLRLSRAKIAL CCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCHHEEEEEHEECCHHHHHHHHHHHH RRRTGGHDEGWHIKASTPQGRRETHAPLSEDVPPELLQEVRAIVRNSPLIAVARVDNERH HHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCC LSFASDSENRVLLELCDDHVHSVSYLEKGTEQRWREWEIEATACAQQLGQADSLLEAADS CEECCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHH VVRAQGATDPQSGSKLQSALGDSAFYVPSPPQPAVVDSSSPAFPVLASLQRDSAALIQWD HHHHCCCCCCCCHHHHHHHHCCCEEECCCCCCCCEECCCCCCHHHHHHHCCCCCEEEEEC PRVRRDEPDAVHQMRVITRQLRSNLHTFREFFTPHSTEKLEAKLKELAAVLGNARDCEVV CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHH QARFRFISDDLAASLLDESTRDFLHHGLDADYAKAHHRINLALNDQRYFDLLNDIDSFLA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHEEEEEECCHHHHHHHHHHHHHHC YPPLVAQTKSTNSSFPALVESLDEAYAAMQRRYSKAAPCYKDLEKSLPEYEETFHDLRKS CCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHH VKKFRYAADAIGSSTPLATKKLVRACKKLQTDLGEFQDTATSRVMIHKAARHAELRGVSS HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH FGLGIVYSYEYQRAVVHLRAAKKSYKEVSQAYKDLQKKAKKKKK CCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]