| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is glgP [H]
Identifier: 38234127
GI number: 38234127
Start: 1579137
End: 1581566
Strand: Direct
Name: glgP [H]
Synonym: DIP1552
Alternate gene names: 38234127
Gene position: 1579137-1581566 (Clockwise)
Preceding gene: 38234126
Following gene: 38234142
Centisome position: 63.45
GC content: 53.99
Gene sequence:
>2430_bases ATGAGCAAACATCGCTCCCCCGAAACAGGACACGCGTCCGCCTCGGTTTCCCACCCTGCCTGCGCTGATATGAACATCGC CGGCTACGTCCGTGCCGCATCAGGCACTGCCCCCGCGGATGCAACCGACCGCAAGTTCTGGTTCGGACTCTCCGCTGCAG TCATGCAGCAACTAGCCGACAATTGGGATGCCACAACCAAGGCATATAGTGCAACGCGCCAGCAGCACTATTTTTCTGCA GAGTTCCTCATGGGACGTGCACTTCTCAATAACCTCACCAACCTCGGCTTAGACGAGTCCGTCGCCGAAGAAGTTCGTAA CAACGGCCACGAACTCGCCGACGTACTCGAAGCAGAAAATGATGCAGCACTAGGCAATGGTGGTCTTGGACGCCTAGCAG CATGCTTCCTCGATTCATGCGCTACCCAAGACTTCCCAGTTACCGGCTACGGAATCTTGTACCGCTACGGCCTGTTCAAG CAGACCTTCGACAACGGTTTCCAAACCGAGCACCCTGATGCATGGCGCGAAGATGGCTATCCCTTTACCATTCGCCGTGA CGATCAACAGCGCACCGTCACATTCGACGACATGGTTGTCCGCGCTACTCCATACGACATGCCAATCACCGGCTACGGCA CCGATAACGTAGGTACGCTGCGCCTATGGAAGGCCGAACCAGTAGAAGAATTCGACTACGACGCCTTTAACTCACAGCGC TTCACCGACGCAATCGTTGAACGCGAGCAAGTCATGGATATTTGCCGTGTCCTCTACCCTAACGACACCACTTACGCCGG CAAGGTGCTGCGTGTACGCCAGCAGTACTTCTTCGTTTCTGCATCCTTGCAGCAGATGATCGACAACTACATCGAGCATC ACGGCACTGACCTACGTGACTTCCACAAGTACAACAGCATTCAGCTCAACGACACCCACCCAGTGCTCGCCATCCCTGAG CTCATGCGCCTACTTCTTGATGAACACAACATGAGCTGGGACGATGCTTGGGCAGTAGTTCAAGGCACGTTTGCTTACAC AAACCACACCGTTCTCGCCGAAGCACTGGAACAGTGGAATGTTTCCATCTTCCAGCAGTTGTTCTACCGCGTGTGGGAAA TCACTCAGGAAATCGATCGCCGCTTCCGCGAGGAAATGCAAGCTCGTGGCGTTGACCAAGGCCAGATTGATTACATGGCA CCCGTCCAAGACGGCAACGTTCACATGGCATGGATCGCCTGCTACGCAGCATTCTCCATCAATGGCGTGGCAGCGCTGCA CACCGAGATCATCAAAGCCGAAACGCTGCGCGATTGGCATGAGTTCTGGCCAGAAAAGTTCGATAACAAGACAAACGGTG TGACACCTCGCCGTTGGCTCAAGATGTGCAACCCACGTCTGTCTGCGTTGCTCACCCGCCTATTGGGCTCCGATGCTTGG GTAACCGATTTGTCCGAGCTGCATAAACTCCGCGAATTCGTCAATGACGACGCGGTGATGAAGGAGCTACTGGAGATCAA GACTGCCAACAAGGTTGATTTCGCCCGCTGGATTGAAGATCGTCAAGGAATCGCCGTAGATTCCGATTCCATCTACGACA CTCAGATCAAGCGACTTCACGAGTACAAGCGCCAGCTCCTCAATGCCTTGTACATCATGGATCTCTACTTCCGCATCAAG GAAGATGGTGAAACCGGTATCGCGCCACGCACCTTCATCTTCGGTGCAAAGGCTGCACCTGGCTACATCCGTGCAAAGGC TATTATCAAACTGATCAACGCCATTGCTGAGCTAGTAAACAATGATCCTGAGGTTTCCAAGACACTCAAGGTAGTGTTCG TAGAAAACTACAACGTTTCGCCCGCAGAGCACATCATCCCAGCTTCTGATGTTTCCGAGCAGATTTCTACCGCAGGTAAG GAAGCATCCGGCACGTCCAACATGAAGTTCATGATGAACGGTGCACTAACTCTCGGTACTCTCGATGGTGCCAACGTAGA AATCCTCGATGCGGTTGGCGACGACAACGCCTACATCTTCGGTGCTAAGAACGAGGAGCTTCCGGAGCTCAAGGCTCACT ACAACCCTTACGAAAAGTACGAAACTGTCCCAGGCCTCAAGCGCGTTCTCGACGCATTGGTCAACGGTACTGTCAACGAC GACAATTCCGGTTGGTTCCACGACTTGCGCGGTTCGCTTCTCGACGGCAACGGCTGGGAGACTCCCGACGTTTACTACGT GCTCGGCGACTATGCCTCCTACCGTGAGACTCGCGATCGTATGGCCAACGATTACATGTCTGATCGCCTGGCATGGGCTC GTAAGTGCTGGATTAACATTTGCGAATCCGGCCGCTTTTCCTCCGACCGCACTATCTCCGACTACGCACGTGAGGTATGG AAGATCGACGCAACGCCGATTAACCACTAG
Upstream 100 bases:
>100_bases GGCTCCGAGAACACAAAACAGACAAGTAAGATAGCACTTCGAATAAGTACGTCGTAAGTGTCGTACTTATAGAGCATAAG AAATACTTTTAGGAGTAGGT
Downstream 100 bases:
>100_bases TGCATAAAAAATCCACCGTGGAAAGGTTTATCCCCTGACCACGGTGGTCTTTTATTATCCAAGATTTATAGACCGTTGAG GTCCTCACCTAGGTGGTGTA
Product: putative glycogen phosphorylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 809; Mature: 808
Protein sequence:
>809_residues MSKHRSPETGHASASVSHPACADMNIAGYVRAASGTAPADATDRKFWFGLSAAVMQQLADNWDATTKAYSATRQQHYFSA EFLMGRALLNNLTNLGLDESVAEEVRNNGHELADVLEAENDAALGNGGLGRLAACFLDSCATQDFPVTGYGILYRYGLFK QTFDNGFQTEHPDAWREDGYPFTIRRDDQQRTVTFDDMVVRATPYDMPITGYGTDNVGTLRLWKAEPVEEFDYDAFNSQR FTDAIVEREQVMDICRVLYPNDTTYAGKVLRVRQQYFFVSASLQQMIDNYIEHHGTDLRDFHKYNSIQLNDTHPVLAIPE LMRLLLDEHNMSWDDAWAVVQGTFAYTNHTVLAEALEQWNVSIFQQLFYRVWEITQEIDRRFREEMQARGVDQGQIDYMA PVQDGNVHMAWIACYAAFSINGVAALHTEIIKAETLRDWHEFWPEKFDNKTNGVTPRRWLKMCNPRLSALLTRLLGSDAW VTDLSELHKLREFVNDDAVMKELLEIKTANKVDFARWIEDRQGIAVDSDSIYDTQIKRLHEYKRQLLNALYIMDLYFRIK EDGETGIAPRTFIFGAKAAPGYIRAKAIIKLINAIAELVNNDPEVSKTLKVVFVENYNVSPAEHIIPASDVSEQISTAGK EASGTSNMKFMMNGALTLGTLDGANVEILDAVGDDNAYIFGAKNEELPELKAHYNPYEKYETVPGLKRVLDALVNGTVND DNSGWFHDLRGSLLDGNGWETPDVYYVLGDYASYRETRDRMANDYMSDRLAWARKCWINICESGRFSSDRTISDYAREVW KIDATPINH
Sequences:
>Translated_809_residues MSKHRSPETGHASASVSHPACADMNIAGYVRAASGTAPADATDRKFWFGLSAAVMQQLADNWDATTKAYSATRQQHYFSA EFLMGRALLNNLTNLGLDESVAEEVRNNGHELADVLEAENDAALGNGGLGRLAACFLDSCATQDFPVTGYGILYRYGLFK QTFDNGFQTEHPDAWREDGYPFTIRRDDQQRTVTFDDMVVRATPYDMPITGYGTDNVGTLRLWKAEPVEEFDYDAFNSQR FTDAIVEREQVMDICRVLYPNDTTYAGKVLRVRQQYFFVSASLQQMIDNYIEHHGTDLRDFHKYNSIQLNDTHPVLAIPE LMRLLLDEHNMSWDDAWAVVQGTFAYTNHTVLAEALEQWNVSIFQQLFYRVWEITQEIDRRFREEMQARGVDQGQIDYMA PVQDGNVHMAWIACYAAFSINGVAALHTEIIKAETLRDWHEFWPEKFDNKTNGVTPRRWLKMCNPRLSALLTRLLGSDAW VTDLSELHKLREFVNDDAVMKELLEIKTANKVDFARWIEDRQGIAVDSDSIYDTQIKRLHEYKRQLLNALYIMDLYFRIK EDGETGIAPRTFIFGAKAAPGYIRAKAIIKLINAIAELVNNDPEVSKTLKVVFVENYNVSPAEHIIPASDVSEQISTAGK EASGTSNMKFMMNGALTLGTLDGANVEILDAVGDDNAYIFGAKNEELPELKAHYNPYEKYETVPGLKRVLDALVNGTVND DNSGWFHDLRGSLLDGNGWETPDVYYVLGDYASYRETRDRMANDYMSDRLAWARKCWINICESGRFSSDRTISDYAREVW KIDATPINH >Mature_808_residues SKHRSPETGHASASVSHPACADMNIAGYVRAASGTAPADATDRKFWFGLSAAVMQQLADNWDATTKAYSATRQQHYFSAE FLMGRALLNNLTNLGLDESVAEEVRNNGHELADVLEAENDAALGNGGLGRLAACFLDSCATQDFPVTGYGILYRYGLFKQ TFDNGFQTEHPDAWREDGYPFTIRRDDQQRTVTFDDMVVRATPYDMPITGYGTDNVGTLRLWKAEPVEEFDYDAFNSQRF TDAIVEREQVMDICRVLYPNDTTYAGKVLRVRQQYFFVSASLQQMIDNYIEHHGTDLRDFHKYNSIQLNDTHPVLAIPEL MRLLLDEHNMSWDDAWAVVQGTFAYTNHTVLAEALEQWNVSIFQQLFYRVWEITQEIDRRFREEMQARGVDQGQIDYMAP VQDGNVHMAWIACYAAFSINGVAALHTEIIKAETLRDWHEFWPEKFDNKTNGVTPRRWLKMCNPRLSALLTRLLGSDAWV TDLSELHKLREFVNDDAVMKELLEIKTANKVDFARWIEDRQGIAVDSDSIYDTQIKRLHEYKRQLLNALYIMDLYFRIKE DGETGIAPRTFIFGAKAAPGYIRAKAIIKLINAIAELVNNDPEVSKTLKVVFVENYNVSPAEHIIPASDVSEQISTAGKE ASGTSNMKFMMNGALTLGTLDGANVEILDAVGDDNAYIFGAKNEELPELKAHYNPYEKYETVPGLKRVLDALVNGTVNDD NSGWFHDLRGSLLDGNGWETPDVYYVLGDYASYRETRDRMANDYMSDRLAWARKCWINICESGRFSSDRTISDYAREVWK IDATPINH
Specific function: Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties [
COG id: COG0058
COG function: function code G; Glucan phosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycogen phosphorylase family [H]
Homologues:
Organism=Homo sapiens, GI71037379, Length=793, Percent_Identity=43.0012610340479, Blast_Score=620, Evalue=1e-177, Organism=Homo sapiens, GI5032009, Length=793, Percent_Identity=42.3707440100883, Blast_Score=608, Evalue=1e-174, Organism=Homo sapiens, GI21361370, Length=793, Percent_Identity=42.1185372005044, Blast_Score=605, Evalue=1e-173, Organism=Homo sapiens, GI255653002, Length=791, Percent_Identity=41.7193426042984, Blast_Score=586, Evalue=1e-167, Organism=Homo sapiens, GI257900462, Length=671, Percent_Identity=42.026825633383, Blast_Score=536, Evalue=1e-152, Organism=Escherichia coli, GI48994936, Length=780, Percent_Identity=44.2307692307692, Blast_Score=627, Evalue=0.0, Organism=Escherichia coli, GI2367228, Length=790, Percent_Identity=42.9113924050633, Blast_Score=594, Evalue=1e-171, Organism=Caenorhabditis elegans, GI32566204, Length=794, Percent_Identity=43.7027707808564, Blast_Score=636, Evalue=0.0, Organism=Caenorhabditis elegans, GI17564550, Length=794, Percent_Identity=43.7027707808564, Blast_Score=635, Evalue=0.0, Organism=Saccharomyces cerevisiae, GI6325418, Length=812, Percent_Identity=39.2857142857143, Blast_Score=540, Evalue=1e-154, Organism=Drosophila melanogaster, GI78706832, Length=793, Percent_Identity=42.7490542244641, Blast_Score=602, Evalue=1e-172, Organism=Drosophila melanogaster, GI24581010, Length=793, Percent_Identity=42.7490542244641, Blast_Score=602, Evalue=1e-172,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011833 - InterPro: IPR000811 [H]
Pfam domain/function: PF00343 Phosphorylase [H]
EC number: =2.4.1.1 [H]
Molecular weight: Translated: 91924; Mature: 91793
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: PS00102 PHOSPHORYLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKHRSPETGHASASVSHPACADMNIAGYVRAASGTAPADATDRKFWFGLSAAVMQQLAD CCCCCCCCCCCCCCCCCCCCCCCCCHHHEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHC NWDATTKAYSATRQQHYFSAEFLMGRALLNNLTNLGLDESVAEEVRNNGHELADVLEAEN CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHCCC DAALGNGGLGRLAACFLDSCATQDFPVTGYGILYRYGLFKQTFDNGFQTEHPDAWREDGY CCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCC PFTIRRDDQQRTVTFDDMVVRATPYDMPITGYGTDNVGTLRLWKAEPVEEFDYDAFNSQR CEEEEECCCCCEEECCCEEEEECCCCCCEECCCCCCCCEEEEECCCCHHHCCCCCCCCCH FTDAIVEREQVMDICRVLYPNDTTYAGKVLRVRQQYFFVSASLQQMIDNYIEHHGTDLRD HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH FHKYNSIQLNDTHPVLAIPELMRLLLDEHNMSWDDAWAVVQGTFAYTNHTVLAEALEQWN HHCCCCEEECCCCCCEEHHHHHHHHHHHCCCCHHHHHHHHCCCHHHCCHHHHHHHHHHHC VSIFQQLFYRVWEITQEIDRRFREEMQARGVDQGQIDYMAPVQDGNVHMAWIACYAAFSI HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCEEEHHHHHHHHHHC NGVAALHTEIIKAETLRDWHEFWPEKFDNKTNGVTPRRWLKMCNPRLSALLTRLLGSDAW CCHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCHHHHHHHHCHHHHHHHHHHHCCCCH VTDLSELHKLREFVNDDAVMKELLEIKTANKVDFARWIEDRQGIAVDSDSIYDTQIKRLH HHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCEECCCCHHHHHHHHHH EYKRQLLNALYIMDLYFRIKEDGETGIAPRTFIFGAKAAPGYIRAKAIIKLINAIAELVN HHHHHHHHHHHHHHHHHHEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHC NDPEVSKTLKVVFVENYNVSPAEHIIPASDVSEQISTAGKEASGTSNMKFMMNGALTLGT CCCCHHHEEEEEEEECCCCCHHHHCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCEEEEE LDGANVEILDAVGDDNAYIFGAKNEELPELKAHYNPYEKYETVPGLKRVLDALVNGTVND CCCCCEEEEEECCCCCEEEEECCCCCCCHHHHCCCHHHHHHCCHHHHHHHHHHHCCCCCC DNSGWFHDLRGSLLDGNGWETPDVYYVLGDYASYRETRDRMANDYMSDRLAWARKCWINI CCCCCHHHHCCCEECCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CESGRFSSDRTISDYAREVWKIDATPINH HCCCCCCCCCCHHHHHHHHHCCCCCCCCC >Mature Secondary Structure SKHRSPETGHASASVSHPACADMNIAGYVRAASGTAPADATDRKFWFGLSAAVMQQLAD CCCCCCCCCCCCCCCCCCCCCCCCHHHEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHC NWDATTKAYSATRQQHYFSAEFLMGRALLNNLTNLGLDESVAEEVRNNGHELADVLEAEN CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHCCC DAALGNGGLGRLAACFLDSCATQDFPVTGYGILYRYGLFKQTFDNGFQTEHPDAWREDGY CCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCC PFTIRRDDQQRTVTFDDMVVRATPYDMPITGYGTDNVGTLRLWKAEPVEEFDYDAFNSQR CEEEEECCCCCEEECCCEEEEECCCCCCEECCCCCCCCEEEEECCCCHHHCCCCCCCCCH FTDAIVEREQVMDICRVLYPNDTTYAGKVLRVRQQYFFVSASLQQMIDNYIEHHGTDLRD HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH FHKYNSIQLNDTHPVLAIPELMRLLLDEHNMSWDDAWAVVQGTFAYTNHTVLAEALEQWN HHCCCCEEECCCCCCEEHHHHHHHHHHHCCCCHHHHHHHHCCCHHHCCHHHHHHHHHHHC VSIFQQLFYRVWEITQEIDRRFREEMQARGVDQGQIDYMAPVQDGNVHMAWIACYAAFSI HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCEEEHHHHHHHHHHC NGVAALHTEIIKAETLRDWHEFWPEKFDNKTNGVTPRRWLKMCNPRLSALLTRLLGSDAW CCHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCHHHHHHHHCHHHHHHHHHHHCCCCH VTDLSELHKLREFVNDDAVMKELLEIKTANKVDFARWIEDRQGIAVDSDSIYDTQIKRLH HHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCEECCCCHHHHHHHHHH EYKRQLLNALYIMDLYFRIKEDGETGIAPRTFIFGAKAAPGYIRAKAIIKLINAIAELVN HHHHHHHHHHHHHHHHHHEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHC NDPEVSKTLKVVFVENYNVSPAEHIIPASDVSEQISTAGKEASGTSNMKFMMNGALTLGT CCCCHHHEEEEEEEECCCCCHHHHCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCEEEEE LDGANVEILDAVGDDNAYIFGAKNEELPELKAHYNPYEKYETVPGLKRVLDALVNGTVND CCCCCEEEEEECCCCCEEEEECCCCCCCHHHHCCCHHHHHHCCHHHHHHHHHHHCCCCCC DNSGWFHDLRGSLLDGNGWETPDVYYVLGDYASYRETRDRMANDYMSDRLAWARKCWINI CCCCCHHHHCCCEECCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CESGRFSSDRTISDYAREVWKIDATPINH HCCCCCCCCCCHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]