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The map label for this gene is cpsA1 [H]

Identifier: 38234126

GI number: 38234126

Start: 1577710

End: 1579014

Strand: Direct

Name: cpsA1 [H]

Synonym: DIP1551

Alternate gene names: 38234126

Gene position: 1577710-1579014 (Clockwise)

Preceding gene: 38234125

Following gene: 38234127

Centisome position: 63.4

GC content: 52.11

Gene sequence:

>1305_bases
ATGACTTTTAACGAAGCCAAATCTTCCACTATGAAAACAGTGCTCGCCCACAGTATGGAACGCTTAGAGTGGCAGCGCGA
CATATATAAGCGCATGCACCAGCATCCAGAATTATCGGGCACCGAGCAGTGGACCGCCCAAATGATCTGCGACGAACTGG
ATCAATTTGATTGCGAGGTCACTACCCATATTGGTGGCTATGGAATTGTCGCTGTTTTTCACAATGGCGACGGCCCTTGC
GTTCTCATGCGCGCCGATTTCGATGGTTTGCCAGTATTAGAGCTCACGGGTGCCGAGTTTGCGTCGACACGCAAACAAGA
TCGCAATGGCACTTTGGTGCCCGTCATGCATGCTTGTGGTCATGACATGCATACCACTGCGCTTTTGGGATGCTGTGCAG
CCCTTAATGCTCATCGCGATGCGTGGTCAGGAACGTTTGTGGCATTGTTCCAACCATCGGAAGAAAATGGTCAAGGTGCC
GCAGCCATGGTCGCCGACGGATTAGGCCGCGCAATCCCGCGCCCCGATGTCTGCTTTGGTCAGCACATTGTGCCAGGACC
TGCTGGCCAAGTGATGACAATGCCTGGACCTGCACTCGCGGCCTGCGATTCTATTGAGATAATTATCACGGGCCGATCCG
CACACGGTTCCATGCCCCATAACGCCATAGATCCCACATATATCGCCTCGATGATCGTGATTAGATTGCAAGGAATTGTC
GGGCGTGAAATCCCACCAGACCAATTCGCAGTCGTGTCTGTGGGCACGTTAGAGTCAGGAAATTCGAATAACACCATTCC
AGGTACAGCCCGCATTGTTGTGAACTGTCGCATGTACGACGAGGGGGTACGCGATACCCTCTATTCCGCAATTGAACGCG
TCGTACGTGCCGAGTGTGCAGCCCAGTCGACAACCGTCGATCCAACATTCAGGTACTTCGCACACGGCCCCTTGACCAGC
AACAATAGTGGAGTTTTTGCTACGGTTAGACCACAACTCGACGCCCATTTTGGCGATCAGTCAACACAAGCAGAAAAGTG
GACAGCGTCGGAAGACTTTTCCAACATTCCGGACGCATTTCAGGCACCATATCTTTTTTGGACAGTTGGTTGTACCCCTC
AACAACAATGGGAAGCTGCGTGCGAAGCAGGCACCATCGATCAAGACATTCCTGTGAACCATTCAGGAACGTTCCTGCCA
GATTTTGTCCCGACAGTCACCTCGTCAACGCAAGCTGCGATTATTGCCGTACTCAGTTATCTCTCCCCAGATACTCCCCC
TCAAAGTGACTTAGCCCATAATTAG

Upstream 100 bases:

>100_bases
ACCGAATGTTCCGTGCGTCGAAATAGTCTTTTGTACAACAAAAATCTCAACATGTAGCGCAACTACAGCGAGTTATATGC
TTTCCCCTATGGTGGAGTTT

Downstream 100 bases:

>100_bases
GTTCCGATCGGAATGCCCATTTGGCTCCGAGAACACAAAACAGACAAGTAAGATAGCACTTCGAATAAGTACGTCGTAAG
TGTCGTACTTATAGAGCATA

Product: putative peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 434; Mature: 433

Protein sequence:

>434_residues
MTFNEAKSSTMKTVLAHSMERLEWQRDIYKRMHQHPELSGTEQWTAQMICDELDQFDCEVTTHIGGYGIVAVFHNGDGPC
VLMRADFDGLPVLELTGAEFASTRKQDRNGTLVPVMHACGHDMHTTALLGCCAALNAHRDAWSGTFVALFQPSEENGQGA
AAMVADGLGRAIPRPDVCFGQHIVPGPAGQVMTMPGPALAACDSIEIIITGRSAHGSMPHNAIDPTYIASMIVIRLQGIV
GREIPPDQFAVVSVGTLESGNSNNTIPGTARIVVNCRMYDEGVRDTLYSAIERVVRAECAAQSTTVDPTFRYFAHGPLTS
NNSGVFATVRPQLDAHFGDQSTQAEKWTASEDFSNIPDAFQAPYLFWTVGCTPQQQWEAACEAGTIDQDIPVNHSGTFLP
DFVPTVTSSTQAAIIAVLSYLSPDTPPQSDLAHN

Sequences:

>Translated_434_residues
MTFNEAKSSTMKTVLAHSMERLEWQRDIYKRMHQHPELSGTEQWTAQMICDELDQFDCEVTTHIGGYGIVAVFHNGDGPC
VLMRADFDGLPVLELTGAEFASTRKQDRNGTLVPVMHACGHDMHTTALLGCCAALNAHRDAWSGTFVALFQPSEENGQGA
AAMVADGLGRAIPRPDVCFGQHIVPGPAGQVMTMPGPALAACDSIEIIITGRSAHGSMPHNAIDPTYIASMIVIRLQGIV
GREIPPDQFAVVSVGTLESGNSNNTIPGTARIVVNCRMYDEGVRDTLYSAIERVVRAECAAQSTTVDPTFRYFAHGPLTS
NNSGVFATVRPQLDAHFGDQSTQAEKWTASEDFSNIPDAFQAPYLFWTVGCTPQQQWEAACEAGTIDQDIPVNHSGTFLP
DFVPTVTSSTQAAIIAVLSYLSPDTPPQSDLAHN
>Mature_433_residues
TFNEAKSSTMKTVLAHSMERLEWQRDIYKRMHQHPELSGTEQWTAQMICDELDQFDCEVTTHIGGYGIVAVFHNGDGPCV
LMRADFDGLPVLELTGAEFASTRKQDRNGTLVPVMHACGHDMHTTALLGCCAALNAHRDAWSGTFVALFQPSEENGQGAA
AMVADGLGRAIPRPDVCFGQHIVPGPAGQVMTMPGPALAACDSIEIIITGRSAHGSMPHNAIDPTYIASMIVIRLQGIVG
REIPPDQFAVVSVGTLESGNSNNTIPGTARIVVNCRMYDEGVRDTLYSAIERVVRAECAAQSTTVDPTFRYFAHGPLTSN
NSGVFATVRPQLDAHFGDQSTQAEKWTASEDFSNIPDAFQAPYLFWTVGCTPQQQWEAACEAGTIDQDIPVNHSGTFLPD
FVPTVTSSTQAAIIAVLSYLSPDTPPQSDLAHN

Specific function: Can release basic, acidic, aromatic, and, to a lesser extent, aliphatic amino acids [H]

COG id: COG1473

COG function: function code R; Metal-dependent amidase/aminoacylase/carboxypeptidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20 family [H]

Homologues:

Organism=Escherichia coli, GI87081880, Length=240, Percent_Identity=28.75, Blast_Score=62, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017439
- InterPro:   IPR010168
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]

EC number: NA

Molecular weight: Translated: 46881; Mature: 46750

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFNEAKSSTMKTVLAHSMERLEWQRDIYKRMHQHPELSGTEQWTAQMICDELDQFDCEV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCEE
TTHIGGYGIVAVFHNGDGPCVLMRADFDGLPVLELTGAEFASTRKQDRNGTLVPVMHACG
EEEECCEEEEEEEECCCCCEEEEEECCCCCCEEEECCCHHHHHHCCCCCCCEEEEHHHCC
HDMHTTALLGCCAALNAHRDAWSGTFVALFQPSEENGQGAAAMVADGLGRAIPRPDVCFG
CCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCC
QHIVPGPAGQVMTMPGPALAACDSIEIIITGRSAHGSMPHNAIDPTYIASMIVIRLQGIV
CCCCCCCCCCEEECCCCHHHHCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHH
GREIPPDQFAVVSVGTLESGNSNNTIPGTARIVVNCRMYDEGVRDTLYSAIERVVRAECA
CCCCCCCCEEEEEEEEECCCCCCCCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHH
AQSTTVDPTFRYFAHGPLTSNNSGVFATVRPQLDAHFGDQSTQAEKWTASEDFSNIPDAF
HCCCCCCCCHHEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHCCCCCCHHCCCHHH
QAPYLFWTVGCTPQQQWEAACEAGTIDQDIPVNHSGTFLPDFVPTVTSSTQAAIIAVLSY
CCCEEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHH
LSPDTPPQSDLAHN
HCCCCCCCCCCCCC
>Mature Secondary Structure 
TFNEAKSSTMKTVLAHSMERLEWQRDIYKRMHQHPELSGTEQWTAQMICDELDQFDCEV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCEE
TTHIGGYGIVAVFHNGDGPCVLMRADFDGLPVLELTGAEFASTRKQDRNGTLVPVMHACG
EEEECCEEEEEEEECCCCCEEEEEECCCCCCEEEECCCHHHHHHCCCCCCCEEEEHHHCC
HDMHTTALLGCCAALNAHRDAWSGTFVALFQPSEENGQGAAAMVADGLGRAIPRPDVCFG
CCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCC
QHIVPGPAGQVMTMPGPALAACDSIEIIITGRSAHGSMPHNAIDPTYIASMIVIRLQGIV
CCCCCCCCCCEEECCCCHHHHCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHH
GREIPPDQFAVVSVGTLESGNSNNTIPGTARIVVNCRMYDEGVRDTLYSAIERVVRAECA
CCCCCCCCEEEEEEEEECCCCCCCCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHH
AQSTTVDPTFRYFAHGPLTSNNSGVFATVRPQLDAHFGDQSTQAEKWTASEDFSNIPDAF
HCCCCCCCCHHEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHCCCCCCHHCCCHHH
QAPYLFWTVGCTPQQQWEAACEAGTIDQDIPVNHSGTFLPDFVPTVTSSTQAAIIAVLSY
CCCEEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHH
LSPDTPPQSDLAHN
HCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7559343; 11427726; 1597179 [H]