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The map label for this gene is ftsY [H]

Identifier: 38234113

GI number: 38234113

Start: 1559123

End: 1560610

Strand: Reverse

Name: ftsY [H]

Synonym: DIP1538

Alternate gene names: 38234113

Gene position: 1560610-1559123 (Counterclockwise)

Preceding gene: 38234114

Following gene: 38234112

Centisome position: 62.71

GC content: 52.49

Gene sequence:

>1488_bases
GTGATCATTGCCCAGCGAAATAAAAAAGCGAAGACCGTAAGCTTCGAATCCGCCGCAGATTCAGAGCAGAAACAACTTAC
GCAACAGCAGCGATCTGGAAACTACCAAGCACAAGGAGAGTTTTCGTTCGCGCCCGCGCAGGCGCCTATGGCTGTTAAAG
ATGCAGTCCCTGCTACGCCGCCCGTGGGCTCGATTCAGGAACCTGAGTTGCCGCATGAAGAAGCTCCCATTGTGGATTCC
GAGCAACCTTTAGATCACCAAGTGGAATCTGAATCTGATGCAGACAAAGCAGCAGAAGAAGCTCAAGCAGTTGTAGAAGA
GGCTGCTCAGCTGCGTGAGGAAGAACAGCTTCGCGTAGAAACTGAGCAAGCTGCTCGCGATAATTTCGATGCACTCGAAG
AATTTGACAAGCCTCAACCTGATACGAACAACGCTGCAGAGACTGAGGCTCAAGAGGCTGCTCTGGCTGCTGACGTAGTA
GCTGAGGCTGCAGCTGAGGCGCGTGAAGTATCAGAACCATCGGATGTAGAAGAGGCACCGGTTGCCGAGGCTGTCACGGA
TTCCATTGATCCAGCAGTTGGTCGAATTGGACGTTTGCGTGGGCGCCTCGCGCGTTCCCATAACGTGTTCGGTAAGTCTG
TCTTGGGAATGCTATCGGCTGGCGACTTGGATGAAGAGGCTTGGGAAGATATCGAAGCCTTGTTGATTCAGGCGGATCTT
GGCGTTGGAATCACCACGGCTGTTATTGATCAGCTACGTCAGCTGATCGCGGAACGCGGTGTAGAAAACGAGGCACAAGC
CCGCGCTATGCTACGCGAATGCCTCATTAATGCGTGCAAGCCTGAACTCGATAGATCTATTAAAGCGATGCCTTACGACG
GCAAACCCGCCGTTGTATTGGTTGTAGGAGTAAATGGCACTGGTAAGACCACGACGACCGGAAAACTTGCCCGTGTATTA
GTGTCATTGGGGCACTCGGTGGTGCTGGGCGCAGCTGATACTTTCCGTGCTGCAGCCGCAGATCAGTTGGAGACGTGGGG
ACGTCGCGTAAATGCGCATACTGTCCGTGGTGCTGAAGGCGCGGATCCAGCATCGGTTGCGTTTGATGCCGTGGCTTATG
GCGTAGATTCTCATGCTGATGTCGTTCTTATTGATACCGCCGGACGCTTGCACAATTCTTCCAACTTAATGGATCAGCTG
GGCAAGGTTAAGCGCGTGGTGGAAAAGAAGGCTGTTGTCGATGAGGTTCTTTTAGTTCTTGATGCTACGACGGGCCAAAA
TGGTCTGGCTCAGGCACGGACGTTCTCTGAGGTAGTCAATATCACCGGTGTGGTATTGACCAAGCTAGATGGTACGGCGA
AGGGCGGAATTGTTTTCCAGGTCCAAGAAGAATTAGGTGTACCAGTGAAATTGGTTGGTTTAGGAGAAGGCTCTGATGAT
CTAGCGCCTTTCGAGGTCGAAGGGTTCGTCGACGCTTTACTAGGCTGA

Upstream 100 bases:

>100_bases
GGTGTAAAAGCCACGGCAATTTGCCACTATTAGATGTATGAACCTCATCCCGATAGTCGTCATTATTGCCGTGGTTGTGA
TTTTCGCCGTTGTTATTGGC

Downstream 100 bases:

>100_bases
TGTGCCGTGGTGCTTAATGCACCTTAAGCTTGTATGTCCCCCTTTTATCGTTGTTTCTATGAGCATGTAATTGTTCAAAT
AACGGCTGAAAGGGGGATTT

Product: putative cell division protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 495; Mature: 495

Protein sequence:

>495_residues
MIIAQRNKKAKTVSFESAADSEQKQLTQQQRSGNYQAQGEFSFAPAQAPMAVKDAVPATPPVGSIQEPELPHEEAPIVDS
EQPLDHQVESESDADKAAEEAQAVVEEAAQLREEEQLRVETEQAARDNFDALEEFDKPQPDTNNAAETEAQEAALAADVV
AEAAAEAREVSEPSDVEEAPVAEAVTDSIDPAVGRIGRLRGRLARSHNVFGKSVLGMLSAGDLDEEAWEDIEALLIQADL
GVGITTAVIDQLRQLIAERGVENEAQARAMLRECLINACKPELDRSIKAMPYDGKPAVVLVVGVNGTGKTTTTGKLARVL
VSLGHSVVLGAADTFRAAAADQLETWGRRVNAHTVRGAEGADPASVAFDAVAYGVDSHADVVLIDTAGRLHNSSNLMDQL
GKVKRVVEKKAVVDEVLLVLDATTGQNGLAQARTFSEVVNITGVVLTKLDGTAKGGIVFQVQEELGVPVKLVGLGEGSDD
LAPFEVEGFVDALLG

Sequences:

>Translated_495_residues
MIIAQRNKKAKTVSFESAADSEQKQLTQQQRSGNYQAQGEFSFAPAQAPMAVKDAVPATPPVGSIQEPELPHEEAPIVDS
EQPLDHQVESESDADKAAEEAQAVVEEAAQLREEEQLRVETEQAARDNFDALEEFDKPQPDTNNAAETEAQEAALAADVV
AEAAAEAREVSEPSDVEEAPVAEAVTDSIDPAVGRIGRLRGRLARSHNVFGKSVLGMLSAGDLDEEAWEDIEALLIQADL
GVGITTAVIDQLRQLIAERGVENEAQARAMLRECLINACKPELDRSIKAMPYDGKPAVVLVVGVNGTGKTTTTGKLARVL
VSLGHSVVLGAADTFRAAAADQLETWGRRVNAHTVRGAEGADPASVAFDAVAYGVDSHADVVLIDTAGRLHNSSNLMDQL
GKVKRVVEKKAVVDEVLLVLDATTGQNGLAQARTFSEVVNITGVVLTKLDGTAKGGIVFQVQEELGVPVKLVGLGEGSDD
LAPFEVEGFVDALLG
>Mature_495_residues
MIIAQRNKKAKTVSFESAADSEQKQLTQQQRSGNYQAQGEFSFAPAQAPMAVKDAVPATPPVGSIQEPELPHEEAPIVDS
EQPLDHQVESESDADKAAEEAQAVVEEAAQLREEEQLRVETEQAARDNFDALEEFDKPQPDTNNAAETEAQEAALAADVV
AEAAAEAREVSEPSDVEEAPVAEAVTDSIDPAVGRIGRLRGRLARSHNVFGKSVLGMLSAGDLDEEAWEDIEALLIQADL
GVGITTAVIDQLRQLIAERGVENEAQARAMLRECLINACKPELDRSIKAMPYDGKPAVVLVVGVNGTGKTTTTGKLARVL
VSLGHSVVLGAADTFRAAAADQLETWGRRVNAHTVRGAEGADPASVAFDAVAYGVDSHADVVLIDTAGRLHNSSNLMDQL
GKVKRVVEKKAVVDEVLLVLDATTGQNGLAQARTFSEVVNITGVVLTKLDGTAKGGIVFQVQEELGVPVKLVGLGEGSDD
LAPFEVEGFVDALLG

Specific function: Functional homolog of SRP receptor. Probably involved in the reception and insertion of a subset of proteins at the membrane [H]

COG id: COG0552

COG function: function code U; Signal recognition particle GTPase

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Homo sapiens, GI4507215, Length=262, Percent_Identity=30.1526717557252, Blast_Score=130, Evalue=4e-30,
Organism=Homo sapiens, GI226371618, Length=229, Percent_Identity=32.7510917030568, Blast_Score=128, Evalue=1e-29,
Organism=Homo sapiens, GI295424842, Length=390, Percent_Identity=27.4358974358974, Blast_Score=105, Evalue=1e-22,
Organism=Homo sapiens, GI23308697, Length=390, Percent_Identity=27.4358974358974, Blast_Score=104, Evalue=2e-22,
Organism=Homo sapiens, GI89061728, Length=134, Percent_Identity=32.089552238806, Blast_Score=82, Evalue=1e-15,
Organism=Escherichia coli, GI1789874, Length=332, Percent_Identity=41.2650602409639, Blast_Score=234, Evalue=9e-63,
Organism=Escherichia coli, GI1788963, Length=307, Percent_Identity=30.9446254071661, Blast_Score=130, Evalue=2e-31,
Organism=Caenorhabditis elegans, GI17539958, Length=299, Percent_Identity=31.438127090301, Blast_Score=127, Evalue=2e-29,
Organism=Caenorhabditis elegans, GI193206261, Length=303, Percent_Identity=31.3531353135314, Blast_Score=112, Evalue=6e-25,
Organism=Saccharomyces cerevisiae, GI6325345, Length=271, Percent_Identity=28.7822878228782, Blast_Score=128, Evalue=2e-30,
Organism=Saccharomyces cerevisiae, GI6320498, Length=255, Percent_Identity=30.5882352941176, Blast_Score=96, Evalue=1e-20,
Organism=Drosophila melanogaster, GI17647949, Length=278, Percent_Identity=32.0143884892086, Blast_Score=127, Evalue=1e-29,
Organism=Drosophila melanogaster, GI24641198, Length=258, Percent_Identity=31.0077519379845, Blast_Score=110, Evalue=3e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004390
- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR013822 [H]

Pfam domain/function: PF00448 SRP54; PF02881 SRP54_N [H]

EC number: NA

Molecular weight: Translated: 52426; Mature: 52426

Theoretical pI: Translated: 4.20; Mature: 4.20

Prosite motif: PS00216 SUGAR_TRANSPORT_1 ; PS00300 SRP54

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIAQRNKKAKTVSFESAADSEQKQLTQQQRSGNYQAQGEFSFAPAQAPMAVKDAVPATP
CEECCCCCCCCEEECHHHCCHHHHHHHHHHHCCCCCCCCCEEECCCCCCCHHHHCCCCCC
PVGSIQEPELPHEEAPIVDSEQPLDHQVESESDADKAAEEAQAVVEEAAQLREEEQLRVE
CCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TEQAARDNFDALEEFDKPQPDTNNAAETEAQEAALAADVVAEAAAEAREVSEPSDVEEAP
HHHHHCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
VAEAVTDSIDPAVGRIGRLRGRLARSHNVFGKSVLGMLSAGDLDEEAWEDIEALLIQADL
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC
GVGITTAVIDQLRQLIAERGVENEAQARAMLRECLINACKPELDRSIKAMPYDGKPAVVL
CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCEEE
VVGVNGTGKTTTTGKLARVLVSLGHSVVLGAADTFRAAAADQLETWGRRVNAHTVRGAEG
EEECCCCCCCCCHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHCCCEEECCCCC
ADPASVAFDAVAYGVDSHADVVLIDTAGRLHNSSNLMDQLGKVKRVVEKKAVVDEVLLVL
CCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
DATTGQNGLAQARTFSEVVNITGVVLTKLDGTAKGGIVFQVQEELGVPVKLVGLGEGSDD
CCCCCCCHHHHHHHHHHHHHHHHHEEEECCCCCCCCEEEEEHHHHCCCEEEEECCCCCCC
LAPFEVEGFVDALLG
CCCEEHHHHHHHHCC
>Mature Secondary Structure
MIIAQRNKKAKTVSFESAADSEQKQLTQQQRSGNYQAQGEFSFAPAQAPMAVKDAVPATP
CEECCCCCCCCEEECHHHCCHHHHHHHHHHHCCCCCCCCCEEECCCCCCCHHHHCCCCCC
PVGSIQEPELPHEEAPIVDSEQPLDHQVESESDADKAAEEAQAVVEEAAQLREEEQLRVE
CCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TEQAARDNFDALEEFDKPQPDTNNAAETEAQEAALAADVVAEAAAEAREVSEPSDVEEAP
HHHHHCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
VAEAVTDSIDPAVGRIGRLRGRLARSHNVFGKSVLGMLSAGDLDEEAWEDIEALLIQADL
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC
GVGITTAVIDQLRQLIAERGVENEAQARAMLRECLINACKPELDRSIKAMPYDGKPAVVL
CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCEEE
VVGVNGTGKTTTTGKLARVLVSLGHSVVLGAADTFRAAAADQLETWGRRVNAHTVRGAEG
EEECCCCCCCCCHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHCCCEEECCCCC
ADPASVAFDAVAYGVDSHADVVLIDTAGRLHNSSNLMDQLGKVKRVVEKKAVVDEVLLVL
CCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
DATTGQNGLAQARTFSEVVNITGVVLTKLDGTAKGGIVFQVQEELGVPVKLVGLGEGSDD
CCCCCCCHHHHHHHHHHHHHHHHHEEEECCCCCCCCEEEEEHHHHCCCEEEEECCCCCCC
LAPFEVEGFVDALLG
CCCEEHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11234002 [H]