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The map label for this gene is glnD [H]

Identifier: 38234111

GI number: 38234111

Start: 1555644

End: 1557803

Strand: Reverse

Name: glnD [H]

Synonym: DIP1534

Alternate gene names: 38234111

Gene position: 1557803-1555644 (Counterclockwise)

Preceding gene: 38234112

Following gene: 38234110

Centisome position: 62.6

GC content: 51.16

Gene sequence:

>2160_bases
TTGTCAATGATGCCTTTTTCTGCCACGCCGGCTGATATCCGAGAACGAGCCTGTGAGCAAGCATTAGCTGTCATCTCGCA
GCTTCAGATTCCCCCTAGTTGTGCAATCGCCGCTACGGGGTCTTTGGCGCGACGCGAGATGACAAGTTATTCGGATATTG
ACCTTATTCTTTTACATCCGGAAGGCAGTATTCCTTCAGGGCTAGAACACTTTTGGTATCCCATTTGGGATGCAAAAATC
CGGTTGGACTATACCGTGCGCACTCCCAAAGAATGCGCCGATATGATTTCTGCCGAACCTACGGCAGCATTGGCATTACT
AGATATTTCTCATTGCAGCGGAGATCCACAGTTAACGGCGACAACCCGCTGCGTCGTGCTAGAGCAATGGCGTCGGGAAC
TGAAGAAAAATTTCAACGATGTGACTGATACTGCGATTGCTCGGTGGAATCGTTCTGGATCCGTTGTGGACATGACCCAC
CCTGATCTCAAGCATGGGCGGGGTGGGCTACGAGATATTGAGCTGATCAGAGCATTAGCTCTAGGAAACCTTTGTGACAA
ACGTCCTCTTGGTGAGGAACGCCAACTATTGCTCAACATACGTACAATGCTTCATCAACATGCGGGCAGGGCACGTGATG
TGCTCGATCCAGAATTTGCTGTTGACGTCGCTTTGGACTTGGGATGTGAAGACCGATACGACTTATCGAGAAGCTTGGCA
AAAGCTGCACGCACTATCGATGATGCCACTAATGCCGCATTGTCTACAGCGCGCAATCTGCTCCCGCGGCGAAGTAGCGT
ACGAAAAGCAGTACGTCGACCAGTTGATATTGATGTTGTCGAAGTTGACGGGACTCTTGCGTTGTCGAGAACCCCAAATC
TGGAGGATCCCAGCTTAGTGCTTAGAGTTGCTGCAGCAAGCGCGCGAACAGGTATGACGATTTCGGAATCAGCATGGAAA
CAACTCGAAACTGTTCCTAGCATGCCACCTACATGGCCGAGTGCTGCTGCTAGCAACTTTTTTGCATTGCTTAGTTCTTC
GGTACATAGTCAACGAGTTATCCGAGAACTAGACGAGCATGGATTTTGGTCAGCAATGATCCCACAATGGGAGCATATTA
GGGGACGTATGCCACGTGAATCCGTGCATATTCACACTATTGATGTTCATAGCATGGTGGTAACAGCCAACTGTGCGACG
CAAAGTATTCGAGTTGCGCGTCCTGATCTGTTATTCCTTGCAGCCTTATTCCACGATATTGGCAAGGGGTATGGGCGTCG
TCATGAAGAGGTCGGCGCAGAATTTGTCGTCGATATGGCTACAACGTTGCGGCTCAACCCTTCTGATACTCAAATCGTAG
AGACACTTGTCGCACAGCACACCATAATTCCGCACATTGTTGGACGCTATAACCCAACAAGCACGGAGGCGATAGACAAA
CTTCTTGATGCGGTCAACTATGACCTGTTGACTCTTGATCTGCTAGAGGCACTAGTTGAGGCGGATGCCCAGGGGACTGC
CCCTGGGGTGTGGAGCGCAGTACTGCGATACGGCACACGAGAGCTGTGCGCGCAGGCGCGGCAACGTCTTACCGCTATCG
TCCCTAATCCACCTTCGCTGAGTGCTGTCTCGCCACTGTCCTTAACAGTTGTTAAAGACACCTTGCCAACAGGGAAGAAC
TATGCGGCAGAAGTGGAATGGTCTGGTGACTATGTCAGGGAGATAGTGCGCGTCCTAGCATTGATAGCTGCTAAGGAATG
GAACATTGAATCCGCAGAAATTGTCGTGGTGTCTTCGGATGATGAACCAGCATCTGAAAACGGCTCGGTGGGAGTTTCAG
CGCGTATGAGGGTATATAACCGACTCGGCACGCGTTTCGACTCTGCGGAATTTGAGCAGGCGTACAAGTCAGGCGTGCAC
TCGTCCTTACCACCGTTGGATCGTGGCAAATGCGCGAGTTTCTGGGTCGGTAATATCTTGGAAGTGCGCACGACAGATCG
TCGAGCTGCACTAGGCCACTTATTGGGAGTGCTACCTGACCTTAAGTGGGCGCGGATGTCTAATCCAGGCGCCACGATGA
TTGTGCAATGCGAGCTGAAAGATGGCTTTGATCGCTCCAAAGTTGAGCGTGATGTGACCCGCGTGCTCACCAACGGTTAG

Upstream 100 bases:

>100_bases
ACACCGGAAAGATTGGCGACGGAAAAGTGTGGGTTACTACGGTCGATGACTTGATCCGTGTGCGCACCGGCGAGCGCGGC
GACAGCGCGGTCTAGATTCA

Downstream 100 bases:

>100_bases
CATAGGTACGTTAAAAGATAATGGGTCTGGGTGTTGCTGCGCTGCATCGCCGATCTCCACGTGTCATATGGTTGCTGGAG
AAATAAAGTTTTAGAGGAGA

Product: PII uridylyl-transferase

Products: NA

Alternate protein names: PII uridylyl-transferase; UTase; Uridylyl-removing enzyme [H]

Number of amino acids: Translated: 719; Mature: 718

Protein sequence:

>719_residues
MSMMPFSATPADIRERACEQALAVISQLQIPPSCAIAATGSLARREMTSYSDIDLILLHPEGSIPSGLEHFWYPIWDAKI
RLDYTVRTPKECADMISAEPTAALALLDISHCSGDPQLTATTRCVVLEQWRRELKKNFNDVTDTAIARWNRSGSVVDMTH
PDLKHGRGGLRDIELIRALALGNLCDKRPLGEERQLLLNIRTMLHQHAGRARDVLDPEFAVDVALDLGCEDRYDLSRSLA
KAARTIDDATNAALSTARNLLPRRSSVRKAVRRPVDIDVVEVDGTLALSRTPNLEDPSLVLRVAAASARTGMTISESAWK
QLETVPSMPPTWPSAAASNFFALLSSSVHSQRVIRELDEHGFWSAMIPQWEHIRGRMPRESVHIHTIDVHSMVVTANCAT
QSIRVARPDLLFLAALFHDIGKGYGRRHEEVGAEFVVDMATTLRLNPSDTQIVETLVAQHTIIPHIVGRYNPTSTEAIDK
LLDAVNYDLLTLDLLEALVEADAQGTAPGVWSAVLRYGTRELCAQARQRLTAIVPNPPSLSAVSPLSLTVVKDTLPTGKN
YAAEVEWSGDYVREIVRVLALIAAKEWNIESAEIVVVSSDDEPASENGSVGVSARMRVYNRLGTRFDSAEFEQAYKSGVH
SSLPPLDRGKCASFWVGNILEVRTTDRRAALGHLLGVLPDLKWARMSNPGATMIVQCELKDGFDRSKVERDVTRVLTNG

Sequences:

>Translated_719_residues
MSMMPFSATPADIRERACEQALAVISQLQIPPSCAIAATGSLARREMTSYSDIDLILLHPEGSIPSGLEHFWYPIWDAKI
RLDYTVRTPKECADMISAEPTAALALLDISHCSGDPQLTATTRCVVLEQWRRELKKNFNDVTDTAIARWNRSGSVVDMTH
PDLKHGRGGLRDIELIRALALGNLCDKRPLGEERQLLLNIRTMLHQHAGRARDVLDPEFAVDVALDLGCEDRYDLSRSLA
KAARTIDDATNAALSTARNLLPRRSSVRKAVRRPVDIDVVEVDGTLALSRTPNLEDPSLVLRVAAASARTGMTISESAWK
QLETVPSMPPTWPSAAASNFFALLSSSVHSQRVIRELDEHGFWSAMIPQWEHIRGRMPRESVHIHTIDVHSMVVTANCAT
QSIRVARPDLLFLAALFHDIGKGYGRRHEEVGAEFVVDMATTLRLNPSDTQIVETLVAQHTIIPHIVGRYNPTSTEAIDK
LLDAVNYDLLTLDLLEALVEADAQGTAPGVWSAVLRYGTRELCAQARQRLTAIVPNPPSLSAVSPLSLTVVKDTLPTGKN
YAAEVEWSGDYVREIVRVLALIAAKEWNIESAEIVVVSSDDEPASENGSVGVSARMRVYNRLGTRFDSAEFEQAYKSGVH
SSLPPLDRGKCASFWVGNILEVRTTDRRAALGHLLGVLPDLKWARMSNPGATMIVQCELKDGFDRSKVERDVTRVLTNG
>Mature_718_residues
SMMPFSATPADIRERACEQALAVISQLQIPPSCAIAATGSLARREMTSYSDIDLILLHPEGSIPSGLEHFWYPIWDAKIR
LDYTVRTPKECADMISAEPTAALALLDISHCSGDPQLTATTRCVVLEQWRRELKKNFNDVTDTAIARWNRSGSVVDMTHP
DLKHGRGGLRDIELIRALALGNLCDKRPLGEERQLLLNIRTMLHQHAGRARDVLDPEFAVDVALDLGCEDRYDLSRSLAK
AARTIDDATNAALSTARNLLPRRSSVRKAVRRPVDIDVVEVDGTLALSRTPNLEDPSLVLRVAAASARTGMTISESAWKQ
LETVPSMPPTWPSAAASNFFALLSSSVHSQRVIRELDEHGFWSAMIPQWEHIRGRMPRESVHIHTIDVHSMVVTANCATQ
SIRVARPDLLFLAALFHDIGKGYGRRHEEVGAEFVVDMATTLRLNPSDTQIVETLVAQHTIIPHIVGRYNPTSTEAIDKL
LDAVNYDLLTLDLLEALVEADAQGTAPGVWSAVLRYGTRELCAQARQRLTAIVPNPPSLSAVSPLSLTVVKDTLPTGKNY
AAEVEWSGDYVREIVRVLALIAAKEWNIESAEIVVVSSDDEPASENGSVGVSARMRVYNRLGTRFDSAEFEQAYKSGVHS
SLPPLDRGKCASFWVGNILEVRTTDRRAALGHLLGVLPDLKWARMSNPGATMIVQCELKDGFDRSKVERDVTRVLTNG

Specific function: Modifies, by uridylylation or deuridylylation the PII (glnB) regulatory protein [H]

COG id: COG2844

COG function: function code O; UTP:GlnB (protein PII) uridylyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glnD family [H]

Homologues:

Organism=Escherichia coli, GI1786363, Length=555, Percent_Identity=25.5855855855856, Blast_Score=119, Evalue=6e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010043
- InterPro:   IPR003607
- InterPro:   IPR002934
- InterPro:   IPR013546 [H]

Pfam domain/function: PF08335 GlnD_UR_UTase; PF01909 NTP_transf_2 [H]

EC number: =2.7.7.59 [H]

Molecular weight: Translated: 79233; Mature: 79102

Theoretical pI: Translated: 6.30; Mature: 6.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMMPFSATPADIRERACEQALAVISQLQIPPSCAIAATGSLARREMTSYSDIDLILLHP
CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEECCCHHHHHHHCCCCCCEEEEECC
EGSIPSGLEHFWYPIWDAKIRLDYTVRTPKECADMISAEPTAALALLDISHCSGDPQLTA
CCCCCCCHHHHEEEEEEEEEEEEEEECCHHHHHHHHCCCCCHHEEEEEHHCCCCCCCEEH
TTRCVVLEQWRRELKKNFNDVTDTAIARWNRSGSVVDMTHPDLKHGRGGLRDIELIRALA
HHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCEEECCCCCHHHCCCCCHHHHHHHHHH
LGNLCDKRPLGEERQLLLNIRTMLHQHAGRARDVLDPEFAVDVALDLGCEDRYDLSRSLA
HCCHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHEEEEEECCCCCHHHHHHHHH
KAARTIDDATNAALSTARNLLPRRSSVRKAVRRPVDIDVVEVDGTLALSRTPNLEDPSLV
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEEEEEECCEEEECCCCCCCCHHHH
LRVAAASARTGMTISESAWKQLETVPSMPPTWPSAAASNFFALLSSSVHSQRVIRELDEH
HHHHHHHCCCCCEECHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
GFWSAMIPQWEHIRGRMPRESVHIHTIDVHSMVVTANCATQSIRVARPDLLFLAALFHDI
CCCHHHCCCHHHHHCCCCCCCEEEEEEEEEEEEEEECCCCCCEECCCCHHHHHHHHHHHH
GKGYGRRHEEVGAEFVVDMATTLRLNPSDTQIVETLVAQHTIIPHIVGRYNPTSTEAIDK
HHHHCCCHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
LLDAVNYDLLTLDLLEALVEADAQGTAPGVWSAVLRYGTRELCAQARQRLTAIVPNPPSL
HHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHCCEEECCCCCCC
SAVSPLSLTVVKDTLPTGKNYAAEVEWSGDYVREIVRVLALIAAKEWNIESAEIVVVSSD
CCCCCCEEEEEECCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECC
DEPASENGSVGVSARMRVYNRLGTRFDSAEFEQAYKSGVHSSLPPLDRGKCASFWVGNIL
CCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCEE
EVRTTDRRAALGHLLGVLPDLKWARMSNPGATMIVQCELKDGFDRSKVERDVTRVLTNG
EEECCHHHHHHHHHHHHCCCCCHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SMMPFSATPADIRERACEQALAVISQLQIPPSCAIAATGSLARREMTSYSDIDLILLHP
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEECCCHHHHHHHCCCCCCEEEEECC
EGSIPSGLEHFWYPIWDAKIRLDYTVRTPKECADMISAEPTAALALLDISHCSGDPQLTA
CCCCCCCHHHHEEEEEEEEEEEEEEECCHHHHHHHHCCCCCHHEEEEEHHCCCCCCCEEH
TTRCVVLEQWRRELKKNFNDVTDTAIARWNRSGSVVDMTHPDLKHGRGGLRDIELIRALA
HHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCEEECCCCCHHHCCCCCHHHHHHHHHH
LGNLCDKRPLGEERQLLLNIRTMLHQHAGRARDVLDPEFAVDVALDLGCEDRYDLSRSLA
HCCHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHEEEEEECCCCCHHHHHHHHH
KAARTIDDATNAALSTARNLLPRRSSVRKAVRRPVDIDVVEVDGTLALSRTPNLEDPSLV
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEEEEEECCEEEECCCCCCCCHHHH
LRVAAASARTGMTISESAWKQLETVPSMPPTWPSAAASNFFALLSSSVHSQRVIRELDEH
HHHHHHHCCCCCEECHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
GFWSAMIPQWEHIRGRMPRESVHIHTIDVHSMVVTANCATQSIRVARPDLLFLAALFHDI
CCCHHHCCCHHHHHCCCCCCCEEEEEEEEEEEEEEECCCCCCEECCCCHHHHHHHHHHHH
GKGYGRRHEEVGAEFVVDMATTLRLNPSDTQIVETLVAQHTIIPHIVGRYNPTSTEAIDK
HHHHCCCHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
LLDAVNYDLLTLDLLEALVEADAQGTAPGVWSAVLRYGTRELCAQARQRLTAIVPNPPSL
HHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHCCEEECCCCCCC
SAVSPLSLTVVKDTLPTGKNYAAEVEWSGDYVREIVRVLALIAAKEWNIESAEIVVVSSD
CCCCCCEEEEEECCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECC
DEPASENGSVGVSARMRVYNRLGTRFDSAEFEQAYKSGVHSSLPPLDRGKCASFWVGNIL
CCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCEE
EVRTTDRRAALGHLLGVLPDLKWARMSNPGATMIVQCELKDGFDRSKVERDVTRVLTNG
EEECCHHHHHHHHHHHHCCCCCHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10227160; 12948626 [H]