| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is mtr [H]
Identifier: 38234073
GI number: 38234073
Start: 1516191
End: 1517582
Strand: Direct
Name: mtr [H]
Synonym: DIP1494
Alternate gene names: 38234073
Gene position: 1516191-1517582 (Clockwise)
Preceding gene: 38234072
Following gene: 38234080
Centisome position: 60.92
GC content: 49.28
Gene sequence:
>1392_bases ATGAATAATCAACAACCACGCCATTACGACCTGATCATTGTTGGCTCCGGCTCAGGTAATTCCATCCCAGGTCCCGAATT TGACGATAAATCCATTGCCATCGTGGAAAAAGGGAAATTTGGTGGTACCTGCCTCAACGTAGGGTGCATTCCGACCAAGA TGTTCGTATACGCTTCTGAAATCGCCCAGGTCATCGTCGATTCCGAGCGCTTTGGCATTTCGGCTTCTATTGACTCCGTG CAGTGGCCTGACATCGTAGAGCGCGTATTTGCGCATCGCATTGATCCTATTGCAGCAAGCGGCGAAGAATATCGACGCGG GGACAAAACCCCCAATATCGACGTATACGACCAACATGCGCGTTTTATTGCACCTAAAACATTGCAGATTGGCGATGGCG AAAACGCCCCGATTATTTCCGGTGACACTATCGTCATTGCCACCGGTTCGCGTCCATTTATTCCTTCCTATATTGAAGAA TCAAAGGTCACCTACTACACCAATGAGACGATTATGCGGATGCCCGATTTGCCGCGTTCCATGGTTGTCTTGGGTGGTGG TTACATCGCTATGGAGTTTGCCCATGTGTTCTCCGCACTAGGAGTAAACGTAACGGTGGTCAATCGTTCGCCTCAGCTTC TTCGTGTACTCGATGAGGATATTTCTCATCGTTTCACTGAAATCACCAAGACCAAGATGGATTGTCGTCTGGGGCGCACA GTGTCCAGCGTTGATCAGGACTCCAATGGTGTCACTTTGACGCTTGACGACGGCTCCACTGCCACCGGCGAAGTGCTTTT GGTGGCAACTGGTCGTATTCCTAATGGTGATCAGATGAATCTGGATTCAGCAGGAATCGACATGGATGGCAAACGCATTA AGGTTGATGATTTTGGTCGCACTACTGCCGACGGTGTGTGGGCGCTAGGTGATGTGTCTTCACCTTATCAGCTCAAGCAT GTTGCTAATGCTGAGATGCGTGCAGTAAAGCATAATTTGCTACATCCTGAAGATCTCAAATCAATGCCGCATCAACATGT TCCTGCAGGTGTATTCACACACCCTCAGATTGCAACAGTAGGCCTTACTGAGCAAGAAGCTCGTGACGCTGGATATTCCA TCACAGTGAAGATTCAAAACTATGGTGACGTAGCCTATGGCTGGGCTATGGAAGATACCCAGCATTTTGCGAAGCTCATT GCGGATAAGAAGACTGGACGGTTGCTCGGCGCGCACTTTATCGGCCCTCAAGCCTCCACTCTTATTCAGCAGCTTATTAC CGTCATGGCCTTCGATTTGGATGTGCGAGAGGTAGCAACAAAACAGTACTGGATCCATCCGGCACTGCCTGAGCTAACAG AAAACGCACTGCTCGGACTCGATTTCTCCTAA
Upstream 100 bases:
>100_bases TGATCTTTGCTTCAGCTTCGAAATATATTTTGATACTGATAGTTTGTATGTCATCGTGGCTCACTGCTTCCGGATTCCCT GAAAGGACTCCTCTTTCCTT
Downstream 100 bases:
>100_bases TCGCATAAAGCGAAGGGCTGTACAACTATTTTGTTGTACAGCCCTTCGCTTTATTCTTTAGGTAAGCGCTGCAATGAGTT GGTCAAGATCCCAATGTTGT
Product: mycothione reductase
Products: NA
Alternate protein names: Mycothiol-disulfide reductase; NADPH-dependent mycothione reductase [H]
Number of amino acids: Translated: 463; Mature: 463
Protein sequence:
>463_residues MNNQQPRHYDLIIVGSGSGNSIPGPEFDDKSIAIVEKGKFGGTCLNVGCIPTKMFVYASEIAQVIVDSERFGISASIDSV QWPDIVERVFAHRIDPIAASGEEYRRGDKTPNIDVYDQHARFIAPKTLQIGDGENAPIISGDTIVIATGSRPFIPSYIEE SKVTYYTNETIMRMPDLPRSMVVLGGGYIAMEFAHVFSALGVNVTVVNRSPQLLRVLDEDISHRFTEITKTKMDCRLGRT VSSVDQDSNGVTLTLDDGSTATGEVLLVATGRIPNGDQMNLDSAGIDMDGKRIKVDDFGRTTADGVWALGDVSSPYQLKH VANAEMRAVKHNLLHPEDLKSMPHQHVPAGVFTHPQIATVGLTEQEARDAGYSITVKIQNYGDVAYGWAMEDTQHFAKLI ADKKTGRLLGAHFIGPQASTLIQQLITVMAFDLDVREVATKQYWIHPALPELTENALLGLDFS
Sequences:
>Translated_463_residues MNNQQPRHYDLIIVGSGSGNSIPGPEFDDKSIAIVEKGKFGGTCLNVGCIPTKMFVYASEIAQVIVDSERFGISASIDSV QWPDIVERVFAHRIDPIAASGEEYRRGDKTPNIDVYDQHARFIAPKTLQIGDGENAPIISGDTIVIATGSRPFIPSYIEE SKVTYYTNETIMRMPDLPRSMVVLGGGYIAMEFAHVFSALGVNVTVVNRSPQLLRVLDEDISHRFTEITKTKMDCRLGRT VSSVDQDSNGVTLTLDDGSTATGEVLLVATGRIPNGDQMNLDSAGIDMDGKRIKVDDFGRTTADGVWALGDVSSPYQLKH VANAEMRAVKHNLLHPEDLKSMPHQHVPAGVFTHPQIATVGLTEQEARDAGYSITVKIQNYGDVAYGWAMEDTQHFAKLI ADKKTGRLLGAHFIGPQASTLIQQLITVMAFDLDVREVATKQYWIHPALPELTENALLGLDFS >Mature_463_residues MNNQQPRHYDLIIVGSGSGNSIPGPEFDDKSIAIVEKGKFGGTCLNVGCIPTKMFVYASEIAQVIVDSERFGISASIDSV QWPDIVERVFAHRIDPIAASGEEYRRGDKTPNIDVYDQHARFIAPKTLQIGDGENAPIISGDTIVIATGSRPFIPSYIEE SKVTYYTNETIMRMPDLPRSMVVLGGGYIAMEFAHVFSALGVNVTVVNRSPQLLRVLDEDISHRFTEITKTKMDCRLGRT VSSVDQDSNGVTLTLDDGSTATGEVLLVATGRIPNGDQMNLDSAGIDMDGKRIKVDDFGRTTADGVWALGDVSSPYQLKH VANAEMRAVKHNLLHPEDLKSMPHQHVPAGVFTHPQIATVGLTEQEARDAGYSITVKIQNYGDVAYGWAMEDTQHFAKLI ADKKTGRLLGAHFIGPQASTLIQQLITVMAFDLDVREVATKQYWIHPALPELTENALLGLDFS
Specific function: Catalyzes the NAD(P)H-dependent reduction of mycothione (the oxidized disulfide form of mycothiol) to mycothiol [H]
COG id: COG1249
COG function: function code C; Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family [H]
Homologues:
Organism=Homo sapiens, GI50301238, Length=446, Percent_Identity=28.47533632287, Blast_Score=152, Evalue=7e-37, Organism=Homo sapiens, GI91199540, Length=481, Percent_Identity=27.4428274428274, Blast_Score=145, Evalue=1e-34, Organism=Homo sapiens, GI22035672, Length=432, Percent_Identity=28.0092592592593, Blast_Score=134, Evalue=2e-31, Organism=Homo sapiens, GI148277065, Length=442, Percent_Identity=24.6606334841629, Blast_Score=124, Evalue=2e-28, Organism=Homo sapiens, GI33519430, Length=442, Percent_Identity=24.6606334841629, Blast_Score=124, Evalue=2e-28, Organism=Homo sapiens, GI33519428, Length=442, Percent_Identity=24.6606334841629, Blast_Score=124, Evalue=2e-28, Organism=Homo sapiens, GI33519426, Length=442, Percent_Identity=24.6606334841629, Blast_Score=124, Evalue=2e-28, Organism=Homo sapiens, GI148277071, Length=442, Percent_Identity=24.6606334841629, Blast_Score=124, Evalue=2e-28, Organism=Homo sapiens, GI291045266, Length=432, Percent_Identity=24.7685185185185, Blast_Score=114, Evalue=1e-25, Organism=Homo sapiens, GI291045268, Length=428, Percent_Identity=22.6635514018692, Blast_Score=91, Evalue=2e-18, Organism=Escherichia coli, GI1789915, Length=434, Percent_Identity=30.6451612903226, Blast_Score=174, Evalue=1e-44, Organism=Escherichia coli, GI1786307, Length=438, Percent_Identity=27.8538812785388, Blast_Score=162, Evalue=6e-41, Organism=Escherichia coli, GI87081717, Length=454, Percent_Identity=28.8546255506608, Blast_Score=155, Evalue=7e-39, Organism=Escherichia coli, GI87082354, Length=425, Percent_Identity=25.1764705882353, Blast_Score=134, Evalue=1e-32, Organism=Caenorhabditis elegans, GI32565766, Length=478, Percent_Identity=28.2426778242678, Blast_Score=161, Evalue=7e-40, Organism=Caenorhabditis elegans, GI71983429, Length=342, Percent_Identity=29.2397660818713, Blast_Score=144, Evalue=8e-35, Organism=Caenorhabditis elegans, GI71983419, Length=342, Percent_Identity=29.2397660818713, Blast_Score=144, Evalue=9e-35, Organism=Caenorhabditis elegans, GI17557007, Length=467, Percent_Identity=26.7665952890792, Blast_Score=134, Evalue=9e-32, Organism=Caenorhabditis elegans, GI71982272, Length=447, Percent_Identity=24.3847874720358, Blast_Score=96, Evalue=6e-20, Organism=Saccharomyces cerevisiae, GI6325166, Length=470, Percent_Identity=24.6808510638298, Blast_Score=150, Evalue=5e-37, Organism=Saccharomyces cerevisiae, GI6321091, Length=475, Percent_Identity=27.7894736842105, Blast_Score=146, Evalue=7e-36, Organism=Saccharomyces cerevisiae, GI6325240, Length=491, Percent_Identity=23.2179226069246, Blast_Score=93, Evalue=1e-19, Organism=Drosophila melanogaster, GI21358499, Length=475, Percent_Identity=26.5263157894737, Blast_Score=158, Evalue=7e-39, Organism=Drosophila melanogaster, GI24640553, Length=480, Percent_Identity=26.875, Blast_Score=110, Evalue=2e-24, Organism=Drosophila melanogaster, GI24640549, Length=483, Percent_Identity=26.9151138716356, Blast_Score=110, Evalue=2e-24, Organism=Drosophila melanogaster, GI24640551, Length=480, Percent_Identity=26.875, Blast_Score=110, Evalue=2e-24, Organism=Drosophila melanogaster, GI17737741, Length=481, Percent_Identity=25.7796257796258, Blast_Score=107, Evalue=2e-23,
Paralogues:
None
Copy number: 650 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016156 - InterPro: IPR013027 - InterPro: IPR017817 - InterPro: IPR004099 - InterPro: IPR012999 - InterPro: IPR001327 [H]
Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2; PF02852 Pyr_redox_dim [H]
EC number: =1.8.1.15 [H]
Molecular weight: Translated: 50671; Mature: 50671
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: PS00076 PYRIDINE_REDOX_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNQQPRHYDLIIVGSGSGNSIPGPEFDDKSIAIVEKGKFGGTCLNVGCIPTKMFVYASE CCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCEEEECCCCCHHHHHHHHH IAQVIVDSERFGISASIDSVQWPDIVERVFAHRIDPIAASGEEYRRGDKTPNIDVYDQHA HHHHHCCCCCCCEEECCCCCCCHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCEEECCC RFIAPKTLQIGDGENAPIISGDTIVIATGSRPFIPSYIEESKVTYYTNETIMRMPDLPRS EEECCCEEEECCCCCCCEEECCEEEEECCCCCCCCHHHCCCCEEEEECCEEEECCCCCCE MVVLGGGYIAMEFAHVFSALGVNVTVVNRSPQLLRVLDEDISHRFTEITKTKMDCRLGRT EEEECCCHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH VSSVDQDSNGVTLTLDDGSTATGEVLLVATGRIPNGDQMNLDSAGIDMDGKRIKVDDFGR HHHCCCCCCCEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCC TTADGVWALGDVSSPYQLKHVANAEMRAVKHNLLHPEDLKSMPHQHVPAGVFTHPQIATV CCCCCEEEECCCCCCCHHHHHCCHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCEEEE GLTEQEARDAGYSITVKIQNYGDVAYGWAMEDTQHFAKLIADKKTGRLLGAHFIGPQAST CCCHHHHHCCCCEEEEEEECCCCEEEEEEHHHHHHHHHHHHCCCCCCEEEEEECCCCHHH LIQQLITVMAFDLDVREVATKQYWIHPALPELTENALLGLDFS HHHHHHHHHHCCCCHHHHHHHHEEECCCCHHHCCCCEEEECCC >Mature Secondary Structure MNNQQPRHYDLIIVGSGSGNSIPGPEFDDKSIAIVEKGKFGGTCLNVGCIPTKMFVYASE CCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCEEEECCCCCHHHHHHHHH IAQVIVDSERFGISASIDSVQWPDIVERVFAHRIDPIAASGEEYRRGDKTPNIDVYDQHA HHHHHCCCCCCCEEECCCCCCCHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCEEECCC RFIAPKTLQIGDGENAPIISGDTIVIATGSRPFIPSYIEESKVTYYTNETIMRMPDLPRS EEECCCEEEECCCCCCCEEECCEEEEECCCCCCCCHHHCCCCEEEEECCEEEECCCCCCE MVVLGGGYIAMEFAHVFSALGVNVTVVNRSPQLLRVLDEDISHRFTEITKTKMDCRLGRT EEEECCCHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH VSSVDQDSNGVTLTLDDGSTATGEVLLVATGRIPNGDQMNLDSAGIDMDGKRIKVDDFGR HHHCCCCCCCEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCC TTADGVWALGDVSSPYQLKHVANAEMRAVKHNLLHPEDLKSMPHQHVPAGVFTHPQIATV CCCCCEEEECCCCCCCHHHHHCCHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCEEEE GLTEQEARDAGYSITVKIQNYGDVAYGWAMEDTQHFAKLIADKKTGRLLGAHFIGPQAST CCCHHHHHCCCCEEEEEEECCCCEEEEEEHHHHHHHHHHHHCCCCCCEEEEEECCCCHHH LIQQLITVMAFDLDVREVATKQYWIHPALPELTENALLGLDFS HHHHHHHHHHCCCCHHHHHHHHEEECCCCHHHCCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]