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The map label for this gene is recA

Identifier: 38234031

GI number: 38234031

Start: 1469776

End: 1470894

Strand: Reverse

Name: recA

Synonym: DIP1450

Alternate gene names: 38234031

Gene position: 1470894-1469776 (Counterclockwise)

Preceding gene: 38234032

Following gene: 38234030

Centisome position: 59.1

GC content: 46.74

Gene sequence:

>1119_bases
ATGGCGCCAAGAAAAAATAGTAAGACGCAGCAACCAACTGGAGATAATCGCAAGAAAGCGCTCGATGCGGCTCTTGCGAT
GATCGAAAAAGATTTTGGTAAAGGTGCGGTTATGCGTCTTGGTGACGAGAATCGTCCGCCGATTAGTGCTATCTCCAGCG
GTAACACTGCTATCGACGTAGCTTTAGGAATTGGCGGCTTTCCTCGTGGACGTATCGTTGAGGTATATGGTCCGGAGTCA
TCGGGTAAGACCACCGTCGCATTACATGCTATCGCGCAGGCTCAAAAAGCCGGAGGTATTGCGGCTTTTATTGATGCTGA
GCATGCTCTAGATCCTGATTACGCACGCAAACTGGGTGTAGATACTGATGCATTGCTTGTTTCTCAACCTGATACCGGCG
AACAGGCTTTGGAGATCGCAGATATGCTTGTGCGTTCTGGTGCTATTGACATCATTGTCATCGACTCAGTTGCAGCATTG
ACTCCAAAGGCGGAAATTGAAGGCGAAATGGGAGATAGCCATGTTGGCCTTCAAGCTAGGTTGATGAGTCAGGCGCTCCG
TAAGATGACTGGTGCGCTTTATAACTCAGGCACTACGGCAATCTTTATTAACCAGCTTCGTGAGAAGATCGGTGTTATGT
TCGGTTCGCCCGAAACAACGACCGGTGGTAAAGCCTTGAAATTCTATGCCTCAGTTCGGTGTGATGTCCGACGGATTCAG
ACACTTAAAGATGGTCAAGATGCCATTGGTAACCGGACTCGCTTGAAAGTGGTCAAAAATAAGGTTTCGCCACCGTTTAA
GATCGCAGAATTCGACATCATGTACGGTGAGGGAATTTCACGAGAATCTTCGATTATTGACCTGGGTGTTGATAACGGAA
TTATCAAAAAATCTGGTTCTTGGTTCACATATGAAGGCGACCAGCTCGGACAAGGAAAAGAAAAAGTACGTCTCTATCTT
AAAGAAACGCCAGAACTGGCCGATGAGATTGAAGACAAGATCTTCAGAGCGCTTCATATTGGAAAATACGCTGCATTGAA
GGATGCTGACGATGCGCTGACTGATGATCCAGTAGACATGGTTCCTAACGTAGATTTCGATGACTCAGATGACGATTAA

Upstream 100 bases:

>100_bases
ATTTACCCCTTCTTTCACCCCGTGGATCTTTTTGGGTGAGTGAATACGTCTAAATAAACAGAGAACAAGTTTTAAAGAAA
CAAGAAAAGGAGCACCCATC

Downstream 100 bases:

>100_bases
TCAATCTGATTCTGCTCATAGTGGCAATGCTTCAGCTGTGCAGTCTGAAAAGATTGCGCAGCTGAAAGCCGCTCTTCAAA
ATTTTTCTGCATCAAACAGT

Product: recombinase A

Products: NA

Alternate protein names: Recombinase A

Number of amino acids: Translated: 372; Mature: 371

Protein sequence:

>372_residues
MAPRKNSKTQQPTGDNRKKALDAALAMIEKDFGKGAVMRLGDENRPPISAISSGNTAIDVALGIGGFPRGRIVEVYGPES
SGKTTVALHAIAQAQKAGGIAAFIDAEHALDPDYARKLGVDTDALLVSQPDTGEQALEIADMLVRSGAIDIIVIDSVAAL
TPKAEIEGEMGDSHVGLQARLMSQALRKMTGALYNSGTTAIFINQLREKIGVMFGSPETTTGGKALKFYASVRCDVRRIQ
TLKDGQDAIGNRTRLKVVKNKVSPPFKIAEFDIMYGEGISRESSIIDLGVDNGIIKKSGSWFTYEGDQLGQGKEKVRLYL
KETPELADEIEDKIFRALHIGKYAALKDADDALTDDPVDMVPNVDFDDSDDD

Sequences:

>Translated_372_residues
MAPRKNSKTQQPTGDNRKKALDAALAMIEKDFGKGAVMRLGDENRPPISAISSGNTAIDVALGIGGFPRGRIVEVYGPES
SGKTTVALHAIAQAQKAGGIAAFIDAEHALDPDYARKLGVDTDALLVSQPDTGEQALEIADMLVRSGAIDIIVIDSVAAL
TPKAEIEGEMGDSHVGLQARLMSQALRKMTGALYNSGTTAIFINQLREKIGVMFGSPETTTGGKALKFYASVRCDVRRIQ
TLKDGQDAIGNRTRLKVVKNKVSPPFKIAEFDIMYGEGISRESSIIDLGVDNGIIKKSGSWFTYEGDQLGQGKEKVRLYL
KETPELADEIEDKIFRALHIGKYAALKDADDALTDDPVDMVPNVDFDDSDDD
>Mature_371_residues
APRKNSKTQQPTGDNRKKALDAALAMIEKDFGKGAVMRLGDENRPPISAISSGNTAIDVALGIGGFPRGRIVEVYGPESS
GKTTVALHAIAQAQKAGGIAAFIDAEHALDPDYARKLGVDTDALLVSQPDTGEQALEIADMLVRSGAIDIIVIDSVAALT
PKAEIEGEMGDSHVGLQARLMSQALRKMTGALYNSGTTAIFINQLREKIGVMFGSPETTTGGKALKFYASVRCDVRRIQT
LKDGQDAIGNRTRLKVVKNKVSPPFKIAEFDIMYGEGISRESSIIDLGVDNGIIKKSGSWFTYEGDQLGQGKEKVRLYLK
ETPELADEIEDKIFRALHIGKYAALKDADDALTDDPVDMVPNVDFDDSDDD

Specific function: Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with lexA causing its activation

COG id: COG0468

COG function: function code L; RecA/RadA recombinase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recA family

Homologues:

Organism=Escherichia coli, GI1789051, Length=324, Percent_Identity=63.2716049382716, Blast_Score=434, Evalue=1e-123,

Paralogues:

None

Copy number: 1548 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800-1200 (L-broth) 40,000-60,000 (L-broth + Nalidixate) 4,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): RECA_CORDI (P62213)

Other databases:

- EMBL:   BX248358
- RefSeq:   NP_939798.1
- ProteinModelPortal:   P62213
- SMR:   P62213
- GeneID:   2649721
- GenomeReviews:   BX248353_GR
- KEGG:   cdi:DIP1450
- NMPDR:   fig|257309.1.peg.1389
- HOGENOM:   HBG339889
- OMA:   MAQAPDR
- PhylomeDB:   P62213
- ProtClustDB:   PRK09354
- BioCyc:   CDIP257309:DIP1450-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00268
- InterPro:   IPR003593
- InterPro:   IPR013765
- InterPro:   IPR020584
- InterPro:   IPR020588
- InterPro:   IPR020587
- PANTHER:   PTHR22942:SF1
- PRINTS:   PR00142
- SMART:   SM00382
- TIGRFAMs:   TIGR02012

Pfam domain/function: PF00154 RecA

EC number: NA

Molecular weight: Translated: 40030; Mature: 39899

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: PS00321 RECA_1; PS50162 RECA_2; PS50163 RECA_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPRKNSKTQQPTGDNRKKALDAALAMIEKDFGKGAVMRLGDENRPPISAISSGNTAIDV
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEECCCCCEEEE
ALGIGGFPRGRIVEVYGPESSGKTTVALHAIAQAQKAGGIAAFIDAEHALDPDYARKLGV
EECCCCCCCCCEEEEECCCCCCCEEEEHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHCC
DTDALLVSQPDTGEQALEIADMLVRSGAIDIIVIDSVAALTPKAEIEGEMGDSHVGLQAR
CCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHCCCHHCCCCCCCCCCCHHHH
LMSQALRKMTGALYNSGTTAIFINQLREKIGVMFGSPETTTGGKALKFYASVRCDVRRIQ
HHHHHHHHHHHHHHCCCCCEEHHHHHHHHHCEEECCCCCCCCCCEEEEEHHHHHHHHHHH
TLKDGQDAIGNRTRLKVVKNKVSPPFKIAEFDIMYGEGISRESSIIDLGVDNGIIKKSGS
HHHCCHHHHCCCCEEEHHHHCCCCCEEEEEEEEEECCCCCCCCCEEEECCCCCEEECCCC
WFTYEGDQLGQGKEKVRLYLKETPELADEIEDKIFRALHIGKYAALKDADDALTDDPVDM
EEEECCCHHCCCHHHEEEEECCCHHHHHHHHHHHHHHHHHCCHHHCCCCCHHCCCCCHHH
VPNVDFDDSDDD
CCCCCCCCCCCC
>Mature Secondary Structure 
APRKNSKTQQPTGDNRKKALDAALAMIEKDFGKGAVMRLGDENRPPISAISSGNTAIDV
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEECCCCCEEEE
ALGIGGFPRGRIVEVYGPESSGKTTVALHAIAQAQKAGGIAAFIDAEHALDPDYARKLGV
EECCCCCCCCCEEEEECCCCCCCEEEEHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHCC
DTDALLVSQPDTGEQALEIADMLVRSGAIDIIVIDSVAALTPKAEIEGEMGDSHVGLQAR
CCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHCCCHHCCCCCCCCCCCHHHH
LMSQALRKMTGALYNSGTTAIFINQLREKIGVMFGSPETTTGGKALKFYASVRCDVRRIQ
HHHHHHHHHHHHHHCCCCCEEHHHHHHHHHCEEECCCCCCCCCCEEEEEHHHHHHHHHHH
TLKDGQDAIGNRTRLKVVKNKVSPPFKIAEFDIMYGEGISRESSIIDLGVDNGIIKKSGS
HHHCCHHHHCCCCEEEHHHHCCCCCEEEEEEEEEECCCCCCCCCEEEECCCCCEEECCCC
WFTYEGDQLGQGKEKVRLYLKETPELADEIEDKIFRALHIGKYAALKDADDALTDDPVDM
EEEECCCHHCCCHHHEEEEECCCHHHHHHHHHHHHHHHHHCCHHHCCCCCHHCCCCCHHH
VPNVDFDDSDDD
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 14602910