| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is 38234002
Identifier: 38234002
GI number: 38234002
Start: 1434368
End: 1435309
Strand: Direct
Name: 38234002
Synonym: DIP1417
Alternate gene names: NA
Gene position: 1434368-1435309 (Clockwise)
Preceding gene: 38234000
Following gene: 38234003
Centisome position: 57.64
GC content: 46.71
Gene sequence:
>942_bases ATGAATGAGCGAGAAGCAAAAATGTATGAGCTAGAGTTTCCCGCACCCGATGTAGCTTCTGATGGTGTTGACGGCCCTAC TCTCATCATCGCGATGCAAGGCTATGCTGATGCTGGTTTGGCAGTTGAAGCTAGTGCTGACCACCTACTTTCAGCTCTGG AACACCGGCCAGTTGCAGTGTTCAACAATGACGAGCTCATTGATTACCGATCAAGACGTCCCGCTGTAACCATCGACCAC AACATCGTTGTTGATGCCAATGAGCTTAAGCTCAGTATGGATGTACTTAGAGATTCAAATGGGACCCCCTTCTTACTCTT GTCTGGCCCGGAACCAGATTTGCGTTGGGATGCATTTTCGCAAGCCGTCGCAGATCTCGTCCGTCGCTTCGGAGTAAGGC GCACGATCTGTATTTATGCTGCCCCTATGACGGTGCCGCATACCCGTCCACTTATTGTTTCCGCACATGGCAATTCTTTG GATTTAATCAAGCATCATTTCAGTATTGATTCCAAAGTCACGATACCTGGTTCTGCATCCCTACATATTGAGCGATTGCT TAATAAGAATAATATCGATGTCGCTGGTTACACTGCTCACGTACCTCACTATCTATCTGCATCCGCATACCCACTGGCAA CACTTAAATTGTTAGAGGCAATCACCACCTCTACTAACCTCGACTTCCCATTGAAGACGTTAGAAGCAGATGCTCAAAAG ACGGCACTGCAGGTAGAAGAACAGGTCGCCGGATCTCAAGAAATCGAATCGGTAGTCAAAATTCTTGAGCAACAATACGA TGAAGAGCTCGAAAAATATCGTGAACGCAATCCTAAAGCACTCGAAATTGCTGAAGATGATCTGCCTGATGCAGACGAGC TAGGCGAAGAATTTGAGCGTTTCCTCGCAAACATTGATGAAGAAAATGGCTCCGATGATTAG
Upstream 100 bases:
>100_bases TATCGTGTATAAGACCGAGTCGCGTTTTGTATAACCTCTCAATGAGTTATGGTCTAAGAGCTTGTGCATCGATTTCGGTC TGAGTGAGGAGAAGCAAATT
Downstream 100 bases:
>100_bases GTTGTTGACCGTGGTTCAGTAGGCTAGATTCTATGAACCTTACCCAGATGCTGCCTGATCTCGACGATGTCCCAGAATCG CTTCTCGACGAAGCCATCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 313; Mature: 313
Protein sequence:
>313_residues MNEREAKMYELEFPAPDVASDGVDGPTLIIAMQGYADAGLAVEASADHLLSALEHRPVAVFNNDELIDYRSRRPAVTIDH NIVVDANELKLSMDVLRDSNGTPFLLLSGPEPDLRWDAFSQAVADLVRRFGVRRTICIYAAPMTVPHTRPLIVSAHGNSL DLIKHHFSIDSKVTIPGSASLHIERLLNKNNIDVAGYTAHVPHYLSASAYPLATLKLLEAITTSTNLDFPLKTLEADAQK TALQVEEQVAGSQEIESVVKILEQQYDEELEKYRERNPKALEIAEDDLPDADELGEEFERFLANIDEENGSDD
Sequences:
>Translated_313_residues MNEREAKMYELEFPAPDVASDGVDGPTLIIAMQGYADAGLAVEASADHLLSALEHRPVAVFNNDELIDYRSRRPAVTIDH NIVVDANELKLSMDVLRDSNGTPFLLLSGPEPDLRWDAFSQAVADLVRRFGVRRTICIYAAPMTVPHTRPLIVSAHGNSL DLIKHHFSIDSKVTIPGSASLHIERLLNKNNIDVAGYTAHVPHYLSASAYPLATLKLLEAITTSTNLDFPLKTLEADAQK TALQVEEQVAGSQEIESVVKILEQQYDEELEKYRERNPKALEIAEDDLPDADELGEEFERFLANIDEENGSDD >Mature_313_residues MNEREAKMYELEFPAPDVASDGVDGPTLIIAMQGYADAGLAVEASADHLLSALEHRPVAVFNNDELIDYRSRRPAVTIDH NIVVDANELKLSMDVLRDSNGTPFLLLSGPEPDLRWDAFSQAVADLVRRFGVRRTICIYAAPMTVPHTRPLIVSAHGNSL DLIKHHFSIDSKVTIPGSASLHIERLLNKNNIDVAGYTAHVPHYLSASAYPLATLKLLEAITTSTNLDFPLKTLEADAQK TALQVEEQVAGSQEIESVVKILEQQYDEELEKYRERNPKALEIAEDDLPDADELGEEFERFLANIDEENGSDD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34670; Mature: 34670
Theoretical pI: Translated: 4.30; Mature: 4.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEREAKMYELEFPAPDVASDGVDGPTLIIAMQGYADAGLAVEASADHLLSALEHRPVAV CCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCEEEECCHHHHHHHHHCCCEEE FNNDELIDYRSRRPAVTIDHNIVVDANELKLSMDVLRDSNGTPFLLLSGPEPDLRWDAFS ECCCCEEECCCCCCEEEECCEEEEEHHHHEEEEHHHHCCCCCEEEEEECCCCCCCHHHHH QAVADLVRRFGVRRTICIYAAPMTVPHTRPLIVSAHGNSLDLIKHHFSIDSKVTIPGSAS HHHHHHHHHHCCCEEEEEEECCCCCCCCCCEEEEECCCCCHHHHHHHCCCCEEECCCCCC LHIERLLNKNNIDVAGYTAHVPHYLSASAYPLATLKLLEAITTSTNLDFPLKTLEADAQK HHHHHHHCCCCCEEEEEEECCCHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH TALQVEEQVAGSQEIESVVKILEQQYDEELEKYRERNPKALEIAEDDLPDADELGEEFER HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHH FLANIDEENGSDD HHHCCCCCCCCCC >Mature Secondary Structure MNEREAKMYELEFPAPDVASDGVDGPTLIIAMQGYADAGLAVEASADHLLSALEHRPVAV CCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCEEEECCHHHHHHHHHCCCEEE FNNDELIDYRSRRPAVTIDHNIVVDANELKLSMDVLRDSNGTPFLLLSGPEPDLRWDAFS ECCCCEEECCCCCCEEEECCEEEEEHHHHEEEEHHHHCCCCCEEEEEECCCCCCCHHHHH QAVADLVRRFGVRRTICIYAAPMTVPHTRPLIVSAHGNSLDLIKHHFSIDSKVTIPGSAS HHHHHHHHHHCCCEEEEEEECCCCCCCCCCEEEEECCCCCHHHHHHHCCCCEEECCCCCC LHIERLLNKNNIDVAGYTAHVPHYLSASAYPLATLKLLEAITTSTNLDFPLKTLEADAQK HHHHHHHCCCCCEEEEEEECCCHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH TALQVEEQVAGSQEIESVVKILEQQYDEELEKYRERNPKALEIAEDDLPDADELGEEFER HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHH FLANIDEENGSDD HHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA