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The map label for this gene is yfcH [C]

Identifier: 38233922

GI number: 38233922

Start: 1350598

End: 1351959

Strand: Direct

Name: yfcH [C]

Synonym: DIP1336

Alternate gene names: 38233922

Gene position: 1350598-1351959 (Clockwise)

Preceding gene: 38233892

Following gene: 38233923

Centisome position: 54.27

GC content: 49.78

Gene sequence:

>1362_bases
ATGAGTCTTCACACAAGCCATGTCATCCCAGCACCACGTATAGATGTATGGGAATGGCATACCCGACCCGGAGCAGTATT
TAGGCTTACTCCTCCTTTTTTGCCTCTACGCCCCCTTGAGCAAGCAACCTCATTAGCTAAAGGAACAACAGTTTTTGCGT
TGCCGGCTGGATTACGATGGGAAGCTCGTCACGATCTCAGCGGGTATATCCAGCATCATCGTTTTACGGATGTATGCATC
AATGCCCCAGTGAAGTCTTTGGCTTCATGGCGCCACATACACGACTTTACTGATCACCCCAGCGGCACACTTATCACTGA
TACAGTGCACACGCGAGCACCACGCACTACGTTATCTCCAGCCTTTGCATATCGTCAGCATCAACTCATCAATGATATTC
AGGCGCAGCAACGATTCTATGAATTGACAAGAAGTAATCCCACTGAATCGACACCATTAACCATTGGGCTCACCGGCTCT
CGTGGGCTCGTCGGGCGAGCACTCACAGCACAGTTAACTACCCTTGGCCATACTGTCGTTCAACTTGTACGCGGCGAATC
CAAACCGCATCAGCGTCATTGGGATCCTGCACACCCAGCGCCAAATCTACTTGAGGGCCTCGATGCCTTAATTCATCTTG
CCGGTGAACCCATCCTGGGACGGTTCAATGATGCACACAAAGCCGATATTCGAGACTCTCGGATTGAGCCTACTCGGCAG
TTATCCCAATTAGTTCAAAAAAGCAGTACCTGCCGCACAATGGTGTCCGCCTCTGCGATCGGATACTACGGACATGCGCG
TGGAGACGAAATTCTTGATGAAGGATCCACTCAAGGCGACGACTTCCTAGCCAGTGTGTGCGAGGAATGGGAAGCAGCCA
GCCGCACGGATGCGACCTCAAATAAGCGTATCGTCAACATTCGGACGGGTGTGGTAATGAGCGGTCGTGGCGGAATGCTT
CCAGTTCTTAAAGCTGTGTTTTCTGTAGGACTTGGTGGACCATTTCGCGGCAGCAATCCGTGGATGTCATGGATTGCTAT
TGACGATCTCTGCGATATTTATATTCGTGCTGTGCTTGATCCAAAGCTTTCAGGTGCTATCAATGCAGTAGCCCCTAATC
CAATCAAAAATCAAGATTTTGTCGATGCACTTGCGAAAGAGCTCAAGCGACCGGCAAAAATGACGATTTCATCTTTAGGT
CCAGCAATTCTGCTTGGACAACAGGGGGCAAAGGAATTAGCCTTAGCGGATCAACGCGTCCAGCCACGTGTTTTAAACAA
TTTGGACCACCACTTTCGCTATGTCGATATTCGTAGTTGCCTGGCACACGAACTCGGTGGCGAAAACCTTCTCGATATTT
AA

Upstream 100 bases:

>100_bases
ATACGCATGAAAAATAATTACTTTTCCTAAACCGACCTGTTATTCCTCAACGATTTTTCTGTATCCTCAAACAGATAACC
TATCGGCGAGAAAGGCATTC

Downstream 100 bases:

>100_bases
TAACAATGAATAAACTTACTATCGCACCGACCTGGAATATCTCCACTATCGAGGAGATTCTTACGGACGAAAATTTAAAA
TTTGTCCGTACAGATCAATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 453; Mature: 452

Protein sequence:

>453_residues
MSLHTSHVIPAPRIDVWEWHTRPGAVFRLTPPFLPLRPLEQATSLAKGTTVFALPAGLRWEARHDLSGYIQHHRFTDVCI
NAPVKSLASWRHIHDFTDHPSGTLITDTVHTRAPRTTLSPAFAYRQHQLINDIQAQQRFYELTRSNPTESTPLTIGLTGS
RGLVGRALTAQLTTLGHTVVQLVRGESKPHQRHWDPAHPAPNLLEGLDALIHLAGEPILGRFNDAHKADIRDSRIEPTRQ
LSQLVQKSSTCRTMVSASAIGYYGHARGDEILDEGSTQGDDFLASVCEEWEAASRTDATSNKRIVNIRTGVVMSGRGGML
PVLKAVFSVGLGGPFRGSNPWMSWIAIDDLCDIYIRAVLDPKLSGAINAVAPNPIKNQDFVDALAKELKRPAKMTISSLG
PAILLGQQGAKELALADQRVQPRVLNNLDHHFRYVDIRSCLAHELGGENLLDI

Sequences:

>Translated_453_residues
MSLHTSHVIPAPRIDVWEWHTRPGAVFRLTPPFLPLRPLEQATSLAKGTTVFALPAGLRWEARHDLSGYIQHHRFTDVCI
NAPVKSLASWRHIHDFTDHPSGTLITDTVHTRAPRTTLSPAFAYRQHQLINDIQAQQRFYELTRSNPTESTPLTIGLTGS
RGLVGRALTAQLTTLGHTVVQLVRGESKPHQRHWDPAHPAPNLLEGLDALIHLAGEPILGRFNDAHKADIRDSRIEPTRQ
LSQLVQKSSTCRTMVSASAIGYYGHARGDEILDEGSTQGDDFLASVCEEWEAASRTDATSNKRIVNIRTGVVMSGRGGML
PVLKAVFSVGLGGPFRGSNPWMSWIAIDDLCDIYIRAVLDPKLSGAINAVAPNPIKNQDFVDALAKELKRPAKMTISSLG
PAILLGQQGAKELALADQRVQPRVLNNLDHHFRYVDIRSCLAHELGGENLLDI
>Mature_452_residues
SLHTSHVIPAPRIDVWEWHTRPGAVFRLTPPFLPLRPLEQATSLAKGTTVFALPAGLRWEARHDLSGYIQHHRFTDVCIN
APVKSLASWRHIHDFTDHPSGTLITDTVHTRAPRTTLSPAFAYRQHQLINDIQAQQRFYELTRSNPTESTPLTIGLTGSR
GLVGRALTAQLTTLGHTVVQLVRGESKPHQRHWDPAHPAPNLLEGLDALIHLAGEPILGRFNDAHKADIRDSRIEPTRQL
SQLVQKSSTCRTMVSASAIGYYGHARGDEILDEGSTQGDDFLASVCEEWEAASRTDATSNKRIVNIRTGVVMSGRGGMLP
VLKAVFSVGLGGPFRGSNPWMSWIAIDDLCDIYIRAVLDPKLSGAINAVAPNPIKNQDFVDALAKELKRPAKMTISSLGP
AILLGQQGAKELALADQRVQPRVLNNLDHHFRYVDIRSCLAHELGGENLLDI

Specific function: Unknown

COG id: COG1090

COG function: function code R; Predicted nucleoside-diphosphate sugar epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sugar epimerase family. SDR39U1 subfamily [H]

Homologues:

Organism=Homo sapiens, GI116812630, Length=288, Percent_Identity=31.5972222222222, Blast_Score=120, Evalue=2e-27,
Organism=Escherichia coli, GI1788642, Length=298, Percent_Identity=33.5570469798658, Blast_Score=153, Evalue=2e-38,
Organism=Drosophila melanogaster, GI28573846, Length=291, Percent_Identity=25.4295532646048, Blast_Score=119, Evalue=4e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013549
- InterPro:   IPR001509
- InterPro:   IPR016040
- InterPro:   IPR010099 [H]

Pfam domain/function: PF08338 DUF1731; PF01370 Epimerase [H]

EC number: NA

Molecular weight: Translated: 49908; Mature: 49777

Theoretical pI: Translated: 8.28; Mature: 8.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLHTSHVIPAPRIDVWEWHTRPGAVFRLTPPFLPLRPLEQATSLAKGTTVFALPAGLRW
CCCCCCCCCCCCCCCCEEEECCCCEEEEECCCCCCCCCHHHHHHHHCCCEEEEECCCCCC
EARHDLSGYIQHHRFTDVCINAPVKSLASWRHIHDFTDHPSGTLITDTVHTRAPRTTLSP
CCCCCHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHCCCCCCCCEEECCHHCCCCCCCCCH
AFAYRQHQLINDIQAQQRFYELTRSNPTESTPLTIGLTGSRGLVGRALTAQLTTLGHTVV
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
QLVRGESKPHQRHWDPAHPAPNLLEGLDALIHLAGEPILGRFNDAHKADIRDSRIEPTRQ
HHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHH
LSQLVQKSSTCRTMVSASAIGYYGHARGDEILDEGSTQGDDFLASVCEEWEAASRTDATS
HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCC
NKRIVNIRTGVVMSGRGGMLPVLKAVFSVGLGGPFRGSNPWMSWIAIDDLCDIYIRAVLD
CCEEEEEEECEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHEEHHHHHHHHHHHHHC
PKLSGAINAVAPNPIKNQDFVDALAKELKRPAKMTISSLGPAILLGQQGAKELALADQRV
CHHCCCEECCCCCCCCCHHHHHHHHHHHCCHHHHHHHHCCCEEEECCCCCHHHHHHHHCC
QPRVLNNLDHHFRYVDIRSCLAHELGGENLLDI
CCHHHHHHHHHHEEEHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SLHTSHVIPAPRIDVWEWHTRPGAVFRLTPPFLPLRPLEQATSLAKGTTVFALPAGLRW
CCCCCCCCCCCCCCCEEEECCCCEEEEECCCCCCCCCHHHHHHHHCCCEEEEECCCCCC
EARHDLSGYIQHHRFTDVCINAPVKSLASWRHIHDFTDHPSGTLITDTVHTRAPRTTLSP
CCCCCHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHCCCCCCCCEEECCHHCCCCCCCCCH
AFAYRQHQLINDIQAQQRFYELTRSNPTESTPLTIGLTGSRGLVGRALTAQLTTLGHTVV
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
QLVRGESKPHQRHWDPAHPAPNLLEGLDALIHLAGEPILGRFNDAHKADIRDSRIEPTRQ
HHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHH
LSQLVQKSSTCRTMVSASAIGYYGHARGDEILDEGSTQGDDFLASVCEEWEAASRTDATS
HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCC
NKRIVNIRTGVVMSGRGGMLPVLKAVFSVGLGGPFRGSNPWMSWIAIDDLCDIYIRAVLD
CCEEEEEEECEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHEEHHHHHHHHHHHHHC
PKLSGAINAVAPNPIKNQDFVDALAKELKRPAKMTISSLGPAILLGQQGAKELALADQRV
CHHCCCEECCCCCCCCCHHHHHHHHHHHCCHHHHHHHHCCCEEEECCCCCHHHHHHHHCC
QPRVLNNLDHHFRYVDIRSCLAHELGGENLLDI
CCHHHHHHHHHHEEEHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]