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The map label for this gene is pyrF [H]

Identifier: 38233916

GI number: 38233916

Start: 1341932

End: 1342780

Strand: Reverse

Name: pyrF [H]

Synonym: DIP1330

Alternate gene names: 38233916

Gene position: 1342780-1341932 (Counterclockwise)

Preceding gene: 38233917

Following gene: 38233915

Centisome position: 53.96

GC content: 50.06

Gene sequence:

>849_bases
ATGATCCAAGAGCGAAAAAATCTAGTTACATTCGGCGATCAACTGGTAGAGGCTGGTCGCCGGCTGGGCCGGTTGTGCGT
CGGAATAGATCCTCACCCTAGCTTGCTCAAGCAATGGGGATGTGACGATGGAATAGCAGGATTGCAGAGGTTCACTGAAA
TTTGCGTCGAAGCATTTTCTGGGAACGTGGCGCTGGTGAAACCTCAAGTAGCTTTTTATGAGGCGTGGGGTGCTGCGGGC
TATCAAATTCTTGAATCGGCGATTTCAGAGCTACGACAGGCAGGAACGCTTGTGTTGTCAGATGCAAAACGCGGAGATAT
CGGCTCTACAATGGCTGGTTATGCTCAAGCATGGTTGGCAGAAGAATCCTCGTTGAGCTCTGATGCGGTGACCGTATCCC
CATTCCTCGGTTACGGTTCGCTTTCACCAGTACTTGAGGTAGCTGCATCTACCAATAAAGGTGTTTTTGTTTTGGCGGCC
ACCTCGAATCCAGAGGCGCGATCTTTGCAGGATCGTATTGGTGAAGATGGACTGAGCATTTCGCAATTGATGGTGGATTC
GGTCGCGCTTTCAAATCGAGAGCATAAAGAAAATAACCACTACGGGAATGTAGGTGTTGTAATTGGAGCAACCTTAGCGC
ATCCACCGCAGTTAGAGAGGCTCAATGGGCCGATCTTGTTACCGGGTGTCGGTGCACAAGGCGCAACACCTGCCGATGTT
GCTCGATTAACGCAGGGAGTTCAGGAGCTAGCGTTTGCCAATGTCTCGCGTGGAATTCTCAAGGCAGGGCCTTCTGCATC
TGCGTTATCCACCGCCATTAGTAAATTCGTAGAGGAATTTACTAATTAA

Upstream 100 bases:

>100_bases
CCGTGCAAGGTGTTACTGCGGCAGTACAGGGAATCGAAGCGCTTAGGGCTGGTGAGCTCAGCGTTCGAGCGCTGCAAGAG
CTAGATCATTCGGTGACTCG

Downstream 100 bases:

>100_bases
ATAATCCCAGCTCAGCGCCCTTGTTGCTAACCGCAGGTAGGAAAGCTCCGACCTGCGGTTTTGCAATGTCTTAGGGTGAT
TACCTGTTGGTATGCGAACT

Product: orotidine 5'-phosphate decarboxylase

Products: NA

Alternate protein names: OMP decarboxylase; OMPDCase; OMPdecase [H]

Number of amino acids: Translated: 282; Mature: 282

Protein sequence:

>282_residues
MIQERKNLVTFGDQLVEAGRRLGRLCVGIDPHPSLLKQWGCDDGIAGLQRFTEICVEAFSGNVALVKPQVAFYEAWGAAG
YQILESAISELRQAGTLVLSDAKRGDIGSTMAGYAQAWLAEESSLSSDAVTVSPFLGYGSLSPVLEVAASTNKGVFVLAA
TSNPEARSLQDRIGEDGLSISQLMVDSVALSNREHKENNHYGNVGVVIGATLAHPPQLERLNGPILLPGVGAQGATPADV
ARLTQGVQELAFANVSRGILKAGPSASALSTAISKFVEEFTN

Sequences:

>Translated_282_residues
MIQERKNLVTFGDQLVEAGRRLGRLCVGIDPHPSLLKQWGCDDGIAGLQRFTEICVEAFSGNVALVKPQVAFYEAWGAAG
YQILESAISELRQAGTLVLSDAKRGDIGSTMAGYAQAWLAEESSLSSDAVTVSPFLGYGSLSPVLEVAASTNKGVFVLAA
TSNPEARSLQDRIGEDGLSISQLMVDSVALSNREHKENNHYGNVGVVIGATLAHPPQLERLNGPILLPGVGAQGATPADV
ARLTQGVQELAFANVSRGILKAGPSASALSTAISKFVEEFTN
>Mature_282_residues
MIQERKNLVTFGDQLVEAGRRLGRLCVGIDPHPSLLKQWGCDDGIAGLQRFTEICVEAFSGNVALVKPQVAFYEAWGAAG
YQILESAISELRQAGTLVLSDAKRGDIGSTMAGYAQAWLAEESSLSSDAVTVSPFLGYGSLSPVLEVAASTNKGVFVLAA
TSNPEARSLQDRIGEDGLSISQLMVDSVALSNREHKENNHYGNVGVVIGATLAHPPQLERLNGPILLPGVGAQGATPADV
ARLTQGVQELAFANVSRGILKAGPSASALSTAISKFVEEFTN

Specific function: Unknown

COG id: COG0284

COG function: function code F; Orotidine-5'-phosphate decarboxylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OMP decarboxylase family. Type 2 subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR018089
- InterPro:   IPR011995
- InterPro:   IPR001754
- InterPro:   IPR011060 [H]

Pfam domain/function: PF00215 OMPdecase [H]

EC number: =4.1.1.23 [H]

Molecular weight: Translated: 29649; Mature: 29649

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: PS00156 OMPDECASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQERKNLVTFGDQLVEAGRRLGRLCVGIDPHPSLLKQWGCDDGIAGLQRFTEICVEAFS
CCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHC
GNVALVKPQVAFYEAWGAAGYQILESAISELRQAGTLVLSDAKRGDIGSTMAGYAQAWLA
CCEEEECCHHHHHHHHCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHH
EESSLSSDAVTVSPFLGYGSLSPVLEVAASTNKGVFVLAATSNPEARSLQDRIGEDGLSI
HHCCCCCCCEEECCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHCCCCCHH
SQLMVDSVALSNREHKENNHYGNVGVVIGATLAHPPQLERLNGPILLPGVGAQGATPADV
HHHHHHHHHHCCCCCCCCCCCCCEEEEEEEHHCCCCCHHHCCCCEEECCCCCCCCCHHHH
ARLTQGVQELAFANVSRGILKAGPSASALSTAISKFVEEFTN
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIQERKNLVTFGDQLVEAGRRLGRLCVGIDPHPSLLKQWGCDDGIAGLQRFTEICVEAFS
CCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHC
GNVALVKPQVAFYEAWGAAGYQILESAISELRQAGTLVLSDAKRGDIGSTMAGYAQAWLA
CCEEEECCHHHHHHHHCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHH
EESSLSSDAVTVSPFLGYGSLSPVLEVAASTNKGVFVLAATSNPEARSLQDRIGEDGLSI
HHCCCCCCCEEECCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHCCCCCHH
SQLMVDSVALSNREHKENNHYGNVGVVIGATLAHPPQLERLNGPILLPGVGAQGATPADV
HHHHHHHHHHCCCCCCCCCCCCCEEEEEEEHHCCCCCHHHCCCCEEECCCCCCCCCHHHH
ARLTQGVQELAFANVSRGILKAGPSASALSTAISKFVEEFTN
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA