| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is yqaB [C]
Identifier: 38233846
GI number: 38233846
Start: 1262746
End: 1263441
Strand: Reverse
Name: yqaB [C]
Synonym: DIP1258
Alternate gene names: 38233846
Gene position: 1263441-1262746 (Counterclockwise)
Preceding gene: 38233847
Following gene: 38233845
Centisome position: 50.77
GC content: 45.69
Gene sequence:
>696_bases ATGCTTCGCGGAATTTTATGGGATATGGACGGCACTCTTGTCGATTCTGAAGGAATTTGGGCTCAAGCCACTTTTGCAAT GAGCACCGAAATGGGTAGACGGCTAACAGCAGCTCAACAGCGGGAAACTGTAGGCTCTAGCTTTAATTTCACTGTTAGCC TTTGCGCCAGCAACGCTGGAATAGAACTAGATTCTGAAGCCAAGAATTACTGGCAATCGTTTATGTCACACTACGTCACG GAAAAGTTCGATAGTTCTCTTTTGCCAAATCCAGGAATCAAAGAAGTACTGGATTCATGCCGAAATGCTGAGATTCCAAT GGCTATTGCAACAAACACCATTCGGTCAATCGCAAACCATTCCATAGGAGCAGTAGGGATTGAATACTTTAAGGCGACAG TATGTGGCGATGAAGTTGCTAACCCAAAACCTGCTCCCGATGTGTATCTTAAAGGGGCACAAGCACTGGGAGTGCCTCCA GAAGGGTGCATTGTTTTTGAAGATTCAAAGAGTGGAATGCTTGGTGGATTAGCTGCCGGCTGCATCGTAATTTCTGTTGT CGATCACCTGAATAACCAGCCATTACCCGAAGGTGTTGTTCCGTTATCACGACTGCACGGATCTGCAGATTTCAGAGGTG TATCAGCCGAAGAAATTATGCAATGGTACGCAACATTGTCACCGAATGCTCAATAG
Upstream 100 bases:
>100_bases CAATCAACAGATGCATTTGTGTTGTATCACCCAGAAGCAAAATACTTCAATGTGTAACTAGTTAACCGCGAAGCATAGGT CGATTGCTAGCCTATGACAT
Downstream 100 bases:
>100_bases GTATGTCATACTAAAGGGGTGAAAAATTTCGATTCCCTTTACCATGAACTAGCCGAACGAGCAGAAAAGCGACCTGAAGG CTCCGGCACGGTTGCTGCTT
Product: putative hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 231; Mature: 231
Protein sequence:
>231_residues MLRGILWDMDGTLVDSEGIWAQATFAMSTEMGRRLTAAQQRETVGSSFNFTVSLCASNAGIELDSEAKNYWQSFMSHYVT EKFDSSLLPNPGIKEVLDSCRNAEIPMAIATNTIRSIANHSIGAVGIEYFKATVCGDEVANPKPAPDVYLKGAQALGVPP EGCIVFEDSKSGMLGGLAAGCIVISVVDHLNNQPLPEGVVPLSRLHGSADFRGVSAEEIMQWYATLSPNAQ
Sequences:
>Translated_231_residues MLRGILWDMDGTLVDSEGIWAQATFAMSTEMGRRLTAAQQRETVGSSFNFTVSLCASNAGIELDSEAKNYWQSFMSHYVT EKFDSSLLPNPGIKEVLDSCRNAEIPMAIATNTIRSIANHSIGAVGIEYFKATVCGDEVANPKPAPDVYLKGAQALGVPP EGCIVFEDSKSGMLGGLAAGCIVISVVDHLNNQPLPEGVVPLSRLHGSADFRGVSAEEIMQWYATLSPNAQ >Mature_231_residues MLRGILWDMDGTLVDSEGIWAQATFAMSTEMGRRLTAAQQRETVGSSFNFTVSLCASNAGIELDSEAKNYWQSFMSHYVT EKFDSSLLPNPGIKEVLDSCRNAEIPMAIATNTIRSIANHSIGAVGIEYFKATVCGDEVANPKPAPDVYLKGAQALGVPP EGCIVFEDSKSGMLGGLAAGCIVISVVDHLNNQPLPEGVVPLSRLHGSADFRGVSAEEIMQWYATLSPNAQ
Specific function: Displays high phosphatase activity toward erythrose 4- phosphate, fructose 6-phosphate, 2-deoxyglucose 6-phosphate, and mannose 6-phosphate. May have a role in the intracellular metabolism of many phosphorylated carbohydrates [H]
COG id: COG0637
COG function: function code R; Predicted phosphatase/phosphohexomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily [H]
Homologues:
Organism=Escherichia coli, GI1789046, Length=187, Percent_Identity=29.9465240641711, Blast_Score=74, Evalue=7e-15, Organism=Escherichia coli, GI1787576, Length=181, Percent_Identity=27.0718232044199, Blast_Score=69, Evalue=4e-13, Organism=Escherichia coli, GI1790151, Length=198, Percent_Identity=27.2727272727273, Blast_Score=66, Evalue=2e-12, Organism=Escherichia coli, GI87082080, Length=188, Percent_Identity=30.8510638297872, Blast_Score=66, Evalue=2e-12, Organism=Escherichia coli, GI1788021, Length=184, Percent_Identity=25.5434782608696, Blast_Score=64, Evalue=1e-11, Organism=Drosophila melanogaster, GI20129151, Length=200, Percent_Identity=28.5, Blast_Score=82, Evalue=3e-16, Organism=Drosophila melanogaster, GI116008157, Length=194, Percent_Identity=26.8041237113402, Blast_Score=74, Evalue=7e-14, Organism=Drosophila melanogaster, GI17137324, Length=194, Percent_Identity=25.7731958762887, Blast_Score=67, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006439 - InterPro: IPR006402 - InterPro: IPR005833 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: NA
Molecular weight: Translated: 24759; Mature: 24759
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRGILWDMDGTLVDSEGIWAQATFAMSTEMGRRLTAAQQRETVGSSFNFTVSLCASNAG CCCCEEECCCCCEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCC IELDSEAKNYWQSFMSHYVTEKFDSSLLPNPGIKEVLDSCRNAEIPMAIATNTIRSIANH CEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHC SIGAVGIEYFKATVCGDEVANPKPAPDVYLKGAQALGVPPEGCIVFEDSKSGMLGGLAAG CCHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCEEEEECCCCCCHHHHHHH CIVISVVDHLNNQPLPEGVVPLSRLHGSADFRGVSAEEIMQWYATLSPNAQ HHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHCCCCCC >Mature Secondary Structure MLRGILWDMDGTLVDSEGIWAQATFAMSTEMGRRLTAAQQRETVGSSFNFTVSLCASNAG CCCCEEECCCCCEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCC IELDSEAKNYWQSFMSHYVTEKFDSSLLPNPGIKEVLDSCRNAEIPMAIATNTIRSIANH CEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHC SIGAVGIEYFKATVCGDEVANPKPAPDVYLKGAQALGVPPEGCIVFEDSKSGMLGGLAAG CCHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCEEEEECCCCCCHHHHHHH CIVISVVDHLNNQPLPEGVVPLSRLHGSADFRGVSAEEIMQWYATLSPNAQ HHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10360571 [H]