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The map label for this gene is ycbL [C]

Identifier: 38233748

GI number: 38233748

Start: 1148433

End: 1149080

Strand: Reverse

Name: ycbL [C]

Synonym: DIP1158

Alternate gene names: 38233748

Gene position: 1149080-1148433 (Counterclockwise)

Preceding gene: 38233753

Following gene: 38233747

Centisome position: 46.17

GC content: 51.08

Gene sequence:

>648_bases
TTGATTAGTGTGGACACTATGACTAACGCATCTTCCACTGAGGGTATTTCACTACACCACATCTCAGTATCTGATTTAGA
CAACAATTGTTATCTCCTAACCACAGAGTCCGATGAAGGTACCCAAGGTTTGCTTATCGACGCCGCCGACAACGCGCCAG
CTCTTCTAGACTTGGCCGAATCAGCGGGCGCACGCATCACCGCCGTAGTAACAACACACCGACACTTTGATCATGTCAGA
GCGCTTGAGGACGTCCTCGACACTACCAAGGCAACACATTTTGCTAGTCTCGGAGATAGCCCTCGTCTCCCCCGATCCGC
CGACACAACGTTGGGCGAAGGGGACACCCTCCGCTGGGCAGGCCATAACCTGAGAGCCCATATTCTCCGCGGCCACACCC
AAGAAGGGTTAGCCCTCAGTATCAAAATAGATGGCATCTACCATCTATTTGTTGGAGATAGCCTCTTTCCTAGAGGAGTA
GGAAAAACCTCAACACCAGAGGAGTTCAACCAATTACTCTCAGACGTTAAAACTCGGCTATTCGATGTATATCCAGACAC
TGCTGTTGTACATCCTGGCCACGGAAAACCCACTACTTTAGGAACTGAGCGTCCGCATCTGGAGCAATGGCGCCAACGCG
GTTGGTAA

Upstream 100 bases:

>100_bases
TAACCAGCCAAAATCACTAGTTTGTGCTCGGACTTGTCCAAACTGTCAAGCTATATACAACCAACACTACATCATTTCGA
ACATACTACCGAAGGGAAAA

Downstream 100 bases:

>100_bases
TTACTTCAGTTCACTCCACAGATCTTCATGTATAAAGCCCATAGTCTTTACCAACTTGTTGCAATCATCTCGAGCAGGAA
CGAGCAATGGTCTGTAGCAT

Product: putative hydrolase

Products: NA

Alternate protein names: Beta-Lactamase Domain Protein; Zn-Dependent Hydrolase; Hydrolase; Metallo-Beta-Lactamase Superfamily Protein; Zn-Dependent Hydrolase Glyoxylase; Hydroxyacylglutathione Hydrolase; Beta-Lactamase-Like Protein; Metallo-Beta-Lactamase Family Protein; Beta-Lactamase-Like; Zn-Dependent Hydrolases; Metallo-Beta-Lactamase; Beta-Lactamase; Hydroxyacylglutathione Hydrolase W; Beta-Lactamase Class B; Zn-Dependent Hydrolase Including Glyoxylase

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MISVDTMTNASSTEGISLHHISVSDLDNNCYLLTTESDEGTQGLLIDAADNAPALLDLAESAGARITAVVTTHRHFDHVR
ALEDVLDTTKATHFASLGDSPRLPRSADTTLGEGDTLRWAGHNLRAHILRGHTQEGLALSIKIDGIYHLFVGDSLFPRGV
GKTSTPEEFNQLLSDVKTRLFDVYPDTAVVHPGHGKPTTLGTERPHLEQWRQRGW

Sequences:

>Translated_215_residues
MISVDTMTNASSTEGISLHHISVSDLDNNCYLLTTESDEGTQGLLIDAADNAPALLDLAESAGARITAVVTTHRHFDHVR
ALEDVLDTTKATHFASLGDSPRLPRSADTTLGEGDTLRWAGHNLRAHILRGHTQEGLALSIKIDGIYHLFVGDSLFPRGV
GKTSTPEEFNQLLSDVKTRLFDVYPDTAVVHPGHGKPTTLGTERPHLEQWRQRGW
>Mature_215_residues
MISVDTMTNASSTEGISLHHISVSDLDNNCYLLTTESDEGTQGLLIDAADNAPALLDLAESAGARITAVVTTHRHFDHVR
ALEDVLDTTKATHFASLGDSPRLPRSADTTLGEGDTLRWAGHNLRAHILRGHTQEGLALSIKIDGIYHLFVGDSLFPRGV
GKTSTPEEFNQLLSDVKTRLFDVYPDTAVVHPGHGKPTTLGTERPHLEQWRQRGW

Specific function: Unknown

COG id: COG0491

COG function: function code R; Zn-dependent hydrolases, including glyoxylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787158, Length=204, Percent_Identity=28.921568627451, Blast_Score=63, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23477; Mature: 23477

Theoretical pI: Translated: 5.85; Mature: 5.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISVDTMTNASSTEGISLHHISVSDLDNNCYLLTTESDEGTQGLLIDAADNAPALLDLAE
CEEECCCCCCCCCCCEEEEEEEEECCCCCEEEEEECCCCCCCEEEEECCCCCCHHEEHHH
SAGARITAVVTTHRHFDHVRALEDVLDTTKATHFASLGDSPRLPRSADTTLGEGDTLRWA
CCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEC
GHNLRAHILRGHTQEGLALSIKIDGIYHLFVGDSLFPRGVGKTSTPEEFNQLLSDVKTRL
CCCEEEEEECCCCCCCEEEEEEECCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHH
FDVYPDTAVVHPGHGKPTTLGTERPHLEQWRQRGW
EECCCCCEEEECCCCCCCCCCCCCHHHHHHHHCCC
>Mature Secondary Structure
MISVDTMTNASSTEGISLHHISVSDLDNNCYLLTTESDEGTQGLLIDAADNAPALLDLAE
CEEECCCCCCCCCCCEEEEEEEEECCCCCEEEEEECCCCCCCEEEEECCCCCCHHEEHHH
SAGARITAVVTTHRHFDHVRALEDVLDTTKATHFASLGDSPRLPRSADTTLGEGDTLRWA
CCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEC
GHNLRAHILRGHTQEGLALSIKIDGIYHLFVGDSLFPRGVGKTSTPEEFNQLLSDVKTRL
CCCEEEEEECCCCCCCEEEEEEECCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHH
FDVYPDTAVVHPGHGKPTTLGTERPHLEQWRQRGW
EECCCCCEEEECCCCCCCCCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA