| Definition | Corynebacterium diphtheriae NCTC 13129 chromosome, complete genome. |
|---|---|
| Accession | NC_002935 |
| Length | 2,488,635 |
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The map label for this gene is 38233735
Identifier: 38233735
GI number: 38233735
Start: 1128534
End: 1129466
Strand: Reverse
Name: 38233735
Synonym: DIP1145
Alternate gene names: NA
Gene position: 1129466-1128534 (Counterclockwise)
Preceding gene: 38233737
Following gene: 38233734
Centisome position: 45.38
GC content: 48.98
Gene sequence:
>933_bases ATGACCTCCCCTGTGAAGGCCAATACTAATAAGACTCGCCCCATCAACGCAGTAATCAATGTGGTTTTTGGCGCATTGAT CGGACTCGCAGAGTTGGTGCCGGGCGTTTCTGGTGGCACCGTTGCTTTAGTCGCCGGCATTTATGAACGAGCAATTCACA ATGGCAATGCTCTTGTCCATATTGTGCGTGTCCTAATTAGCGATCGATCCCAGCTTAAAACTTCTATCAAAAGCGTGGAG TGGGGATTTTTAGCATCGGTAGCTGTGGGCATGATCGGCGCTGTTTTTACTATGTCTTCCGTGATGCATCACTTTGTTGA CCACCACCCTATAACAGCGCGTGCCCTGTTCTTAGGAATGGTTTCAGTATCAATAGTAGTTCCATTACGTATGATTCGGG CTGAAAGTTTAAGCTCTCAGAAATTGCCGGCCCTACTTCTTTTTGTTTTTGGCGCTATTGCAACGTTCTTTGCCACAAGC ATGACCTCAGAGCCCAAGACTGACCCATCGCTTTTGATTGTTTTCTTTGTAGCAATGGTTGCCGTATGCGCACTCGTCCT ACCCGGCGTATCCGGCTCATTTATTTTGCTGGCACTGGGTTTTTACGAACCAATTATCCAAGCGGTAAGTGACCGTAACT TCACCATCATCGCAGTGTTCGCTGCCGGTGCCATTACAGGCTTGGCATGTTTTATCAAGGTTCTCGATGTTCTCATGACC CGCCACCACACGCTAACTTTGGCCACCATGGCCGGTATGATGCTCGGTTCGCTTCGCGCACTGTGGCCTTGGCAAACGGA CAATGCCGATCTCCTTTGGCCGCCAGCTGGTTCAGGCACAACATTTGGTTTTATTGCCTTGGGCGCAGTAGTTGTAGCTT GCGTTGTGCTCGCGGAAATTTTGCTTGAGCGTAAGAATTCACACCACAAATAG
Upstream 100 bases:
>100_bases AATTTGATGGGATTTCACGATAAAAAGAGGTTCTCTTAACGCAGTAGGTTACAGTGGACAGTTCATTCAACCACTCTCTT TGAGACGAGAAAGTAGAACC
Downstream 100 bases:
>100_bases CTACCCCGTTTTGCGGATACCTGCGGCAGGGATTCTTAATATTATGAAGATCACGGTATTATTTTAAGAATGACAATCCG CTCTCACGTTGTGGCTATAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 310; Mature: 309
Protein sequence:
>310_residues MTSPVKANTNKTRPINAVINVVFGALIGLAELVPGVSGGTVALVAGIYERAIHNGNALVHIVRVLISDRSQLKTSIKSVE WGFLASVAVGMIGAVFTMSSVMHHFVDHHPITARALFLGMVSVSIVVPLRMIRAESLSSQKLPALLLFVFGAIATFFATS MTSEPKTDPSLLIVFFVAMVAVCALVLPGVSGSFILLALGFYEPIIQAVSDRNFTIIAVFAAGAITGLACFIKVLDVLMT RHHTLTLATMAGMMLGSLRALWPWQTDNADLLWPPAGSGTTFGFIALGAVVVACVVLAEILLERKNSHHK
Sequences:
>Translated_310_residues MTSPVKANTNKTRPINAVINVVFGALIGLAELVPGVSGGTVALVAGIYERAIHNGNALVHIVRVLISDRSQLKTSIKSVE WGFLASVAVGMIGAVFTMSSVMHHFVDHHPITARALFLGMVSVSIVVPLRMIRAESLSSQKLPALLLFVFGAIATFFATS MTSEPKTDPSLLIVFFVAMVAVCALVLPGVSGSFILLALGFYEPIIQAVSDRNFTIIAVFAAGAITGLACFIKVLDVLMT RHHTLTLATMAGMMLGSLRALWPWQTDNADLLWPPAGSGTTFGFIALGAVVVACVVLAEILLERKNSHHK >Mature_309_residues TSPVKANTNKTRPINAVINVVFGALIGLAELVPGVSGGTVALVAGIYERAIHNGNALVHIVRVLISDRSQLKTSIKSVEW GFLASVAVGMIGAVFTMSSVMHHFVDHHPITARALFLGMVSVSIVVPLRMIRAESLSSQKLPALLLFVFGAIATFFATSM TSEPKTDPSLLIVFFVAMVAVCALVLPGVSGSFILLALGFYEPIIQAVSDRNFTIIAVFAAGAITGLACFIKVLDVLMTR HHTLTLATMAGMMLGSLRALWPWQTDNADLLWPPAGSGTTFGFIALGAVVVACVVLAEILLERKNSHHK
Specific function: Unknown
COG id: COG2035
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32931; Mature: 32799
Theoretical pI: Translated: 9.70; Mature: 9.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSPVKANTNKTRPINAVINVVFGALIGLAELVPGVSGGTVALVAGIYERAIHNGNALVH CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHH IVRVLISDRSQLKTSIKSVEWGFLASVAVGMIGAVFTMSSVMHHFVDHHPITARALFLGM HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH VSVSIVVPLRMIRAESLSSQKLPALLLFVFGAIATFFATSMTSEPKTDPSLLIVFFVAMV HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH AVCALVLPGVSGSFILLALGFYEPIIQAVSDRNFTIIAVFAAGAITGLACFIKVLDVLMT HHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHH RHHTLTLATMAGMMLGSLRALWPWQTDNADLLWPPAGSGTTFGFIALGAVVVACVVLAEI HCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHH LLERKNSHHK HHHHHCCCCC >Mature Secondary Structure TSPVKANTNKTRPINAVINVVFGALIGLAELVPGVSGGTVALVAGIYERAIHNGNALVH CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHH IVRVLISDRSQLKTSIKSVEWGFLASVAVGMIGAVFTMSSVMHHFVDHHPITARALFLGM HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH VSVSIVVPLRMIRAESLSSQKLPALLLFVFGAIATFFATSMTSEPKTDPSLLIVFFVAMV HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH AVCALVLPGVSGSFILLALGFYEPIIQAVSDRNFTIIAVFAAGAITGLACFIKVLDVLMT HHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHH RHHTLTLATMAGMMLGSLRALWPWQTDNADLLWPPAGSGTTFGFIALGAVVVACVVLAEI HCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHH LLERKNSHHK HHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA