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The map label for this gene is speE [H]

Identifier: 38233667

GI number: 38233667

Start: 1054665

End: 1055513

Strand: Reverse

Name: speE [H]

Synonym: DIP1073

Alternate gene names: 38233667

Gene position: 1055513-1054665 (Counterclockwise)

Preceding gene: 38233670

Following gene: 38233660

Centisome position: 42.41

GC content: 52.3

Gene sequence:

>849_bases
ATGGGAAGAAAAAGCAAGAATAGTTCTCAGTCGCATGCGCACGGCCCAGTTCCTGGGGTGTATCCGACAACGACAGGTGA
AGTAGAGCTTCGTGCCGATTCTTTTTTGCCCCATGCGTTCGAGGTTTACGTTAATGGTGTCCCATCCAGCCATATCGCCC
AAGATCCTGAGCAATTGGAATATGAATATATGCGTTGGATCGCGGCTATCGTCGATTGGTTTGTTACTACCCATAGCGAT
CCGAAAAAACTACGCGTAACGCACCTAGGTGGCGGTGCCTGCACACTCGCCCGCTACGTATGCCACCGCTACCCCAATGC
GCGTAACACGGTGGTGGAACTCGATGCGACCTTAGCCACGCTGGTGCGGGAGTGGTTTGATTTGCCTCGATCTCCTCAGC
TCAAGATCCGTGTTGGCGATGCTTGGGAAGTAGCCCAAACATTTGTGCCCAGCTCCCGCGATGTCATCATTCGCGATGTT
TTTGCAGGTAATCAAACTCCCCGTCGACTCACCACAGTCGAATTTTTTCAGCAATGCCACCAAGCGCTTTCTCCTGGGGG
ACTTTATGTTGCAAACTGCGGCGACCATCGCGACCTCAACGTTGCAAAAGCGGAAGTACAAGGTTTGCGTGAAGTTTTCG
ATCACGTTGCCTGCATCGCCGACCCTACCATGTTGAAGGGACGACGCTACGGCAACATCATTTTGATTGCCACGGACACC
CAACTCCCCACTGACCAAGAACAACAAGTATTAACACGCCTACTTCTCGGCGGCGGAGTACCCGCCCAATTTAAGGGTGG
CAACTGGACAAAGAATTTCAGTTCCTCATCCACCGCACGACACGATTAA

Upstream 100 bases:

>100_bases
TAGCCTAGTCTTTTTCTCACCGTGGTAACAATTTGCTGTCATGTGCACAGTTACCCCAAAATCCCGTGTTCTAATACTGA
CCGCGTAGCATCGAGTGATT

Downstream 100 bases:

>100_bases
GCCATTCCTGCAAGACGAGCACGCGCAACCACATCAGGAAGCTGAGCAATAAGCGTATCGACGTCCTCCTCGGTCGTGGT
GGCACCAAGTGTAAAGCGTA

Product: putative transferase

Products: NA

Alternate protein names: Putrescine aminopropyltransferase; PAPT; SPDSY [H]

Number of amino acids: Translated: 282; Mature: 281

Protein sequence:

>282_residues
MGRKSKNSSQSHAHGPVPGVYPTTTGEVELRADSFLPHAFEVYVNGVPSSHIAQDPEQLEYEYMRWIAAIVDWFVTTHSD
PKKLRVTHLGGGACTLARYVCHRYPNARNTVVELDATLATLVREWFDLPRSPQLKIRVGDAWEVAQTFVPSSRDVIIRDV
FAGNQTPRRLTTVEFFQQCHQALSPGGLYVANCGDHRDLNVAKAEVQGLREVFDHVACIADPTMLKGRRYGNIILIATDT
QLPTDQEQQVLTRLLLGGGVPAQFKGGNWTKNFSSSSTARHD

Sequences:

>Translated_282_residues
MGRKSKNSSQSHAHGPVPGVYPTTTGEVELRADSFLPHAFEVYVNGVPSSHIAQDPEQLEYEYMRWIAAIVDWFVTTHSD
PKKLRVTHLGGGACTLARYVCHRYPNARNTVVELDATLATLVREWFDLPRSPQLKIRVGDAWEVAQTFVPSSRDVIIRDV
FAGNQTPRRLTTVEFFQQCHQALSPGGLYVANCGDHRDLNVAKAEVQGLREVFDHVACIADPTMLKGRRYGNIILIATDT
QLPTDQEQQVLTRLLLGGGVPAQFKGGNWTKNFSSSSTARHD
>Mature_281_residues
GRKSKNSSQSHAHGPVPGVYPTTTGEVELRADSFLPHAFEVYVNGVPSSHIAQDPEQLEYEYMRWIAAIVDWFVTTHSDP
KKLRVTHLGGGACTLARYVCHRYPNARNTVVELDATLATLVREWFDLPRSPQLKIRVGDAWEVAQTFVPSSRDVIIRDVF
AGNQTPRRLTTVEFFQQCHQALSPGGLYVANCGDHRDLNVAKAEVQGLREVFDHVACIADPTMLKGRRYGNIILIATDTQ
LPTDQEQQVLTRLLLGGGVPAQFKGGNWTKNFSSSSTARHD

Specific function: Catalyzes the production of spermidine from putrescine and decarboxylated S-adenosylmethionine (dcSAM), which serves as an aminopropyl donor [H]

COG id: COG0421

COG function: function code E; Spermidine synthase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the spermidine/spermine synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001045 [H]

Pfam domain/function: PF01564 Spermine_synth [H]

EC number: =2.5.1.16 [H]

Molecular weight: Translated: 31367; Mature: 31236

Theoretical pI: Translated: 7.64; Mature: 7.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRKSKNSSQSHAHGPVPGVYPTTTGEVELRADSFLPHAFEVYVNGVPSSHIAQDPEQLE
CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEECCCCCHHHCCCHHHHH
YEYMRWIAAIVDWFVTTHSDPKKLRVTHLGGGACTLARYVCHRYPNARNTVVELDATLAT
HHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCEEEEHHHHHHH
LVREWFDLPRSPQLKIRVGDAWEVAQTFVPSSRDVIIRDVFAGNQTPRRLTTVEFFQQCH
HHHHHHCCCCCCCEEEEECCHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHH
QALSPGGLYVANCGDHRDLNVAKAEVQGLREVFDHVACIADPTMLKGRRYGNIILIATDT
HHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCEEEEEECC
QLPTDQEQQVLTRLLLGGGVPAQFKGGNWTKNFSSSSTARHD
CCCCCHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
GRKSKNSSQSHAHGPVPGVYPTTTGEVELRADSFLPHAFEVYVNGVPSSHIAQDPEQLE
CCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEECCCCCHHHCCCHHHHH
YEYMRWIAAIVDWFVTTHSDPKKLRVTHLGGGACTLARYVCHRYPNARNTVVELDATLAT
HHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCEEEEHHHHHHH
LVREWFDLPRSPQLKIRVGDAWEVAQTFVPSSRDVIIRDVFAGNQTPRRLTTVEFFQQCH
HHHHHHCCCCCCCEEEEECCHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHH
QALSPGGLYVANCGDHRDLNVAKAEVQGLREVFDHVACIADPTMLKGRRYGNIILIATDT
HHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCEEEEEECC
QLPTDQEQQVLTRLLLGGGVPAQFKGGNWTKNFSSSSTARHD
CCCCCHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 14500782 [H]