Definition | Staphylococcus aureus subsp. aureus Mu50 plasmid VRSAp, complete sequence. |
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Accession | NC_002774 |
Length | 25,107 |
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The map label for this gene is traA [H]
Identifier: 14141826
GI number: 14141826
Start: 2209
End: 4131
Strand: Direct
Name: traA [H]
Synonym: SAVP003
Alternate gene names: 14141826
Gene position: 2209-4131 (Clockwise)
Preceding gene: 14141824
Following gene: 14141827
Centisome position: 8.8
GC content: 29.49
Gene sequence:
>1923_bases ATGAATAAAGGTTACTTTATGTTGAGAGTGACTAACATTAATCGAGCAACAAAAAATATCGTTGCGTCAGCGTCTTATCG TTCTGATGAAGCATTATATAGCGAACGTACAGATGAAAAAATTAAGTTTAGAAATCATACTATTAAGCCTGAAAGCATGA TTTTAACTCCTCAACATGCACCCGAATGGACTAAAGATAGACAGCGTTTATGGAATGAAGTTGATAAAGTTGAAAAGAAT AATGCGAAAACAAAAAATCCTAGATTAGCAAAAGAAGTCTTATTAAGTTTGCCTAATGATTTTGATAGAGAGGTACAAAC TGAATTAACTAAAGATTTTATAAAAAGTGAGTTTGTAGACAAAGGAATGGTTGCTGATATTTCAATTCATAGAGATGATA TAAACAACCCACACGCCCATGTTCTACTTACTCAAAGACCGTTTAATGCAGACGGTACTTGGGGGAAAAAGACAAAAACG AGAACGCAATATGATGAAAATGGCAATGCGATTTTAAATAAAAATGGTAATAAAGTTAGAAAACAAGAACGATTTGCCGA CTTTGATTTCAAAGAAGTTCGTAAGCATTGGGAATTAAAATTAAATCAATACTCAGAACGTGAACAAAGTTTAAGACGAT ATGATAGTCGTTCTTTTGAAGCGCAAGGTTTAGAAAAAATTGCCGAAATTCCACTTACAAGAGAAGAATATAGATTAGAA CAAAATGAAAGAAAACGCTGTGAAAAAGAGGGTATCGAGTACCAACCCGTTACTTATTACGGACAGAAAAATGAACAAAT TAGAAGATATAATCGTGGCGAAGTATCACAATTATTTAGTGATAAAGAGAAAGAACAAGCACAAAATGAAATTAGATTAT TTATTCAAAATGCTAACGAACAAGTAAGTAAAAATGAACAAAGTTATTCTATTTTATTTGATAGATATCAACGTGATGTT GGCTATTCAGAGGCGAAAGAAACAATTAAAAATACGTTTGACAGTGCGTCTACCTTTGGTCGTAAAATTCAAAATGATTT ACTTAAAAATGAAATTAAGAGACGTCAATTAAAATTCTATGCTAAAAATTATGATGAAAATTATCAGTTTAGAAAAGAAA TTGAAAGTAAAGGATATAGTCAACAAGAGTTTGTTAATACTGTTGAAACTAACTATAAAGCGTTACTCAATGAGAAGAAT AAATTAGAAAGTAGAGAGGAAAAACGTAAAGAGATTTATCAATCAGCTAAAGATGTTTATCTAACTGAAAGTGAAAAAAA TCATCTCATTGTTCAGCAAATGTACCCTAAATCTCATCATCATTTTAGCCATGATGAAAAAGCATTTATTGTTGATGAGG CACAAAAAGGTAATATTATAAAAGCAACTCATGTTCAATACCTGTTCAAACAAAATAACAATATTCCTAATGATGTATTG CTAGAAGATACTTATAAAAAAGCGAGTAAAGATATTTTCTTTAGTCAAAAACATCTTAAAAATTTAGAAAAAGATAGCTT TGAATATAACGTTGAGTTGCAATTTATTAAGGAAAAAGAAAAAGAAATTGATAGTTATAAAGAACATATTGATGATGATT TAAGAATAGATATAGGCGATAAAAACTTTGAAAAAGTCAAAGACCAAACACCTAATGAAAAAGTTCAATTACTCATTAAA CTTGAGAAATATAATCATGTCGATCAAGAAGAAGTTATCGAAAAACATATTAATCAAGTAGATAGAAATGATCATGACAA TCGTATTGAACATGAAAATGAACAAACTAATCACATTAATTTACCAACGATAAATGCTAGTGACTTTCTTATGTACTATG CGAACGAAACTGAAAAGCAAAACAATATTAATCATCAGAAAAAGAAGAAGAAACAAGAGAGAAATAACCAAATGAGAAGA TAG
Upstream 100 bases:
>100_bases ACATGCAAATTGAAAATTGGCATAAAAATGGGCAACCATACTGGTTGATCATTATAGTTCCCACAGGGGTAAAAAAACAG AAAAGAGAGGAGGTAAAATC
Downstream 100 bases:
>100_bases TAAGCAGTTGAAATCATACAAAGTTCATTCTTTAATAATAAGAAACTTAACCCAATGTGGTAAATTAGCTTTGGTTTAAA GAAAACATTTATATACTTAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 640; Mature: 640
Protein sequence:
>640_residues MNKGYFMLRVTNINRATKNIVASASYRSDEALYSERTDEKIKFRNHTIKPESMILTPQHAPEWTKDRQRLWNEVDKVEKN NAKTKNPRLAKEVLLSLPNDFDREVQTELTKDFIKSEFVDKGMVADISIHRDDINNPHAHVLLTQRPFNADGTWGKKTKT RTQYDENGNAILNKNGNKVRKQERFADFDFKEVRKHWELKLNQYSEREQSLRRYDSRSFEAQGLEKIAEIPLTREEYRLE QNERKRCEKEGIEYQPVTYYGQKNEQIRRYNRGEVSQLFSDKEKEQAQNEIRLFIQNANEQVSKNEQSYSILFDRYQRDV GYSEAKETIKNTFDSASTFGRKIQNDLLKNEIKRRQLKFYAKNYDENYQFRKEIESKGYSQQEFVNTVETNYKALLNEKN KLESREEKRKEIYQSAKDVYLTESEKNHLIVQQMYPKSHHHFSHDEKAFIVDEAQKGNIIKATHVQYLFKQNNNIPNDVL LEDTYKKASKDIFFSQKHLKNLEKDSFEYNVELQFIKEKEKEIDSYKEHIDDDLRIDIGDKNFEKVKDQTPNEKVQLLIK LEKYNHVDQEEVIEKHINQVDRNDHDNRIEHENEQTNHINLPTINASDFLMYYANETEKQNNINHQKKKKKQERNNQMRR
Sequences:
>Translated_640_residues MNKGYFMLRVTNINRATKNIVASASYRSDEALYSERTDEKIKFRNHTIKPESMILTPQHAPEWTKDRQRLWNEVDKVEKN NAKTKNPRLAKEVLLSLPNDFDREVQTELTKDFIKSEFVDKGMVADISIHRDDINNPHAHVLLTQRPFNADGTWGKKTKT RTQYDENGNAILNKNGNKVRKQERFADFDFKEVRKHWELKLNQYSEREQSLRRYDSRSFEAQGLEKIAEIPLTREEYRLE QNERKRCEKEGIEYQPVTYYGQKNEQIRRYNRGEVSQLFSDKEKEQAQNEIRLFIQNANEQVSKNEQSYSILFDRYQRDV GYSEAKETIKNTFDSASTFGRKIQNDLLKNEIKRRQLKFYAKNYDENYQFRKEIESKGYSQQEFVNTVETNYKALLNEKN KLESREEKRKEIYQSAKDVYLTESEKNHLIVQQMYPKSHHHFSHDEKAFIVDEAQKGNIIKATHVQYLFKQNNNIPNDVL LEDTYKKASKDIFFSQKHLKNLEKDSFEYNVELQFIKEKEKEIDSYKEHIDDDLRIDIGDKNFEKVKDQTPNEKVQLLIK LEKYNHVDQEEVIEKHINQVDRNDHDNRIEHENEQTNHINLPTINASDFLMYYANETEKQNNINHQKKKKKQERNNQMRR >Mature_640_residues MNKGYFMLRVTNINRATKNIVASASYRSDEALYSERTDEKIKFRNHTIKPESMILTPQHAPEWTKDRQRLWNEVDKVEKN NAKTKNPRLAKEVLLSLPNDFDREVQTELTKDFIKSEFVDKGMVADISIHRDDINNPHAHVLLTQRPFNADGTWGKKTKT RTQYDENGNAILNKNGNKVRKQERFADFDFKEVRKHWELKLNQYSEREQSLRRYDSRSFEAQGLEKIAEIPLTREEYRLE QNERKRCEKEGIEYQPVTYYGQKNEQIRRYNRGEVSQLFSDKEKEQAQNEIRLFIQNANEQVSKNEQSYSILFDRYQRDV GYSEAKETIKNTFDSASTFGRKIQNDLLKNEIKRRQLKFYAKNYDENYQFRKEIESKGYSQQEFVNTVETNYKALLNEKN KLESREEKRKEIYQSAKDVYLTESEKNHLIVQQMYPKSHHHFSHDEKAFIVDEAQKGNIIKATHVQYLFKQNNNIPNDVL LEDTYKKASKDIFFSQKHLKNLEKDSFEYNVELQFIKEKEKEIDSYKEHIDDDLRIDIGDKNFEKVKDQTPNEKVQLLIK LEKYNHVDQEEVIEKHINQVDRNDHDNRIEHENEQTNHINLPTINASDFLMYYANETEKQNNINHQKKKKKQERNNQMRR
Specific function: Unknown
COG id: COG0507
COG function: function code L; ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mobA/mobL family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000606 - InterPro: IPR005053 - InterPro: IPR014136 [H]
Pfam domain/function: PF03389 MobA_MobL; PF01443 Viral_helicase1 [H]
EC number: NA
Molecular weight: Translated: 76718; Mature: 76718
Theoretical pI: Translated: 8.75; Mature: 8.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKGYFMLRVTNINRATKNIVASASYRSDEALYSERTDEKIKFRNHTIKPESMILTPQHA CCCCEEEEEEECCCHHHHHHHHHCCCCCHHHHHHHCCCCHHHHCCCCCCCCCEEECCCCC PEWTKDRQRLWNEVDKVEKNNAKTKNPRLAKEVLLSLPNDFDREVQTELTKDFIKSEFVD CCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHC KGMVADISIHRDDINNPHAHVLLTQRPFNADGTWGKKTKTRTQYDENGNAILNKNGNKVR CCCEEEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHH KQERFADFDFKEVRKHWELKLNQYSEREQSLRRYDSRSFEAQGLEKIAEIPLTREEYRLE HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHH QNERKRCEKEGIEYQPVTYYGQKNEQIRRYNRGEVSQLFSDKEKEQAQNEIRLFIQNANE HHHHHHHHHCCCCCCCEEEECCCCHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCH QVSKNEQSYSILFDRYQRDVGYSEAKETIKNTFDSASTFGRKIQNDLLKNEIKRRQLKFY HHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AKNYDENYQFRKEIESKGYSQQEFVNTVETNYKALLNEKNKLESREEKRKEIYQSAKDVY HHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCEE LTESEKNHLIVQQMYPKSHHHFSHDEKAFIVDEAQKGNIIKATHVQYLFKQNNNIPNDVL EECCCCCCEEEEECCCCCCCCCCCCCCEEEEECCCCCCEEEHHHHHHHHHHCCCCCCCCC LEDTYKKASKDIFFSQKHLKNLEKDSFEYNVELQFIKEKEKEIDSYKEHIDDDLRIDIGD HHHHHHHHHHHHHCCHHHHHCCCCCCEEEEEEEHHHHHHHHHHHHHHHHCCCCCEEEECC KNFEKVKDQTPNEKVQLLIKLEKYNHVDQEEVIEKHINQVDRNDHDNRIEHENEQTNHIN CHHHHHHCCCCCCHHEEEEEEHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC LPTINASDFLMYYANETEKQNNINHQKKKKKQERNNQMRR CCEECCCCEEEEECCCHHHHCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure MNKGYFMLRVTNINRATKNIVASASYRSDEALYSERTDEKIKFRNHTIKPESMILTPQHA CCCCEEEEEEECCCHHHHHHHHHCCCCCHHHHHHHCCCCHHHHCCCCCCCCCEEECCCCC PEWTKDRQRLWNEVDKVEKNNAKTKNPRLAKEVLLSLPNDFDREVQTELTKDFIKSEFVD CCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHC KGMVADISIHRDDINNPHAHVLLTQRPFNADGTWGKKTKTRTQYDENGNAILNKNGNKVR CCCEEEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHH KQERFADFDFKEVRKHWELKLNQYSEREQSLRRYDSRSFEAQGLEKIAEIPLTREEYRLE HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHH QNERKRCEKEGIEYQPVTYYGQKNEQIRRYNRGEVSQLFSDKEKEQAQNEIRLFIQNANE HHHHHHHHHCCCCCCCEEEECCCCHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCH QVSKNEQSYSILFDRYQRDVGYSEAKETIKNTFDSASTFGRKIQNDLLKNEIKRRQLKFY HHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AKNYDENYQFRKEIESKGYSQQEFVNTVETNYKALLNEKNKLESREEKRKEIYQSAKDVY HHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCEE LTESEKNHLIVQQMYPKSHHHFSHDEKAFIVDEAQKGNIIKATHVQYLFKQNNNIPNDVL EECCCCCCEEEEECCCCCCCCCCCCCCEEEEECCCCCCEEEHHHHHHHHHHCCCCCCCCC LEDTYKKASKDIFFSQKHLKNLEKDSFEYNVELQFIKEKEKEIDSYKEHIDDDLRIDIGD HHHHHHHHHHHHHCCHHHHHCCCCCCEEEEEEEHHHHHHHHHHHHHHHHCCCCCEEEECC KNFEKVKDQTPNEKVQLLIKLEKYNHVDQEEVIEKHINQVDRNDHDNRIEHENEQTNHIN CHHHHHHCCCCCCHHEEEEEEHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC LPTINASDFLMYYANETEKQNNINHQKKKKKQERNNQMRR CCEECCCCEEEEECCCHHHHCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]