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The map label for this gene is dppC [H]

Identifier: 15925455

GI number: 15925455

Start: 2600835

End: 2601704

Strand: Reverse

Name: dppC [H]

Synonym: SAV2465

Alternate gene names: 15925455

Gene position: 2601704-2600835 (Counterclockwise)

Preceding gene: 15925456

Following gene: 15925454

Centisome position: 90.38

GC content: 35.86

Gene sequence:

>870_bases
ATGATAATTTTAAAACGATTATTACAAGATAAAGGTGCAGTAATTGCTTTAGGCATTATTGTATTATATGTCTTTTTAGG
ATTAGCAGCACCACTTGTGACATTTTATGATCCTAACCATATCGATACAGCAAACAAATTTGCTGGCATCAGTTTTCAAC
ATCTACTAGGTACTGACCATTTAGGTAGAGATATTTTAACTAGGTTAATTTATGCGATTAGACCAAGTTTGTTATATGTC
TTTGTTGCGCTATTTGTTTCTGTACTTATTGGATCTATTTTAGGATTCTTATCAGGATATTTCCAAGGGTTTGTTGACGC
CTTAATCATGCGTGCGTGTGATGTTATGTTGGCATTCCCAAGTTATGTTGTAACGTTAGCATTAATTGCATTGTTTGGAA
TGGGTGCCGAAAATATTATCATGGCATTTATTTTGACGCGTTGGGCATGGTTCTGTCGTGTTATACGTACAAGTGTTATG
CAGTACACTGCTTCTGACCATGTCAGATTTGCTAAAACAATCGGTATGAATGATATGAAAATTATTCACAAACATATTAT
GCCGTTAACATTAGCAGATATTGCTATCATCTCTAGTAGTTCGATGTGTTCAATGATCTTGCAAATATCTGGCTTTTCAT
TTTTAGGATTAGGTGTCAAAGCGCCTACTGCAGAGTGGGGCATGATGCTTAACGAAGCTAGAAAAGTGATGTTTACACAT
CCTGAAATGATGTTTGCGCCAGGTATTGCCATAGTGATTATAGTGATGGCATTTAACTTCTTATCCGATGCTTTACAAAT
TGCTATTGATCCCCGCATCTCTTCTAAAGATAAACTTCGTTCTGTGAAAAAAGGAGTGGTGCAATCATGA

Upstream 100 bases:

>100_bases
AAGCATATGTATTAATTGTAGCGGTATTATTTATTGTATTTAATACATTAGCAGATATCATTAATGCGCTATTAAATCCA
AGATTAAGGGAGGGCGCACG

Downstream 100 bases:

>100_bases
CATTGTTAACAGTTAAGCATTTGACGATTACAGATACCTGGACAGATCAACCACTCGTGAGTGATGTGAATTTTACATTA
ACTAAGGGTGAAACTTTAGG

Product: oligopeptide transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 289; Mature: 289

Protein sequence:

>289_residues
MIILKRLLQDKGAVIALGIIVLYVFLGLAAPLVTFYDPNHIDTANKFAGISFQHLLGTDHLGRDILTRLIYAIRPSLLYV
FVALFVSVLIGSILGFLSGYFQGFVDALIMRACDVMLAFPSYVVTLALIALFGMGAENIIMAFILTRWAWFCRVIRTSVM
QYTASDHVRFAKTIGMNDMKIIHKHIMPLTLADIAIISSSSMCSMILQISGFSFLGLGVKAPTAEWGMMLNEARKVMFTH
PEMMFAPGIAIVIIVMAFNFLSDALQIAIDPRISSKDKLRSVKKGVVQS

Sequences:

>Translated_289_residues
MIILKRLLQDKGAVIALGIIVLYVFLGLAAPLVTFYDPNHIDTANKFAGISFQHLLGTDHLGRDILTRLIYAIRPSLLYV
FVALFVSVLIGSILGFLSGYFQGFVDALIMRACDVMLAFPSYVVTLALIALFGMGAENIIMAFILTRWAWFCRVIRTSVM
QYTASDHVRFAKTIGMNDMKIIHKHIMPLTLADIAIISSSSMCSMILQISGFSFLGLGVKAPTAEWGMMLNEARKVMFTH
PEMMFAPGIAIVIIVMAFNFLSDALQIAIDPRISSKDKLRSVKKGVVQS
>Mature_289_residues
MIILKRLLQDKGAVIALGIIVLYVFLGLAAPLVTFYDPNHIDTANKFAGISFQHLLGTDHLGRDILTRLIYAIRPSLLYV
FVALFVSVLIGSILGFLSGYFQGFVDALIMRACDVMLAFPSYVVTLALIALFGMGAENIIMAFILTRWAWFCRVIRTSVM
QYTASDHVRFAKTIGMNDMKIIHKHIMPLTLADIAIISSSSMCSMILQISGFSFLGLGVKAPTAEWGMMLNEARKVMFTH
PEMMFAPGIAIVIIVMAFNFLSDALQIAIDPRISSKDKLRSVKKGVVQS

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787054, Length=272, Percent_Identity=36.3970588235294, Blast_Score=189, Evalue=1e-49,
Organism=Escherichia coli, GI1789889, Length=241, Percent_Identity=37.344398340249, Blast_Score=182, Evalue=2e-47,
Organism=Escherichia coli, GI1787760, Length=263, Percent_Identity=34.2205323193916, Blast_Score=154, Evalue=6e-39,
Organism=Escherichia coli, GI1789964, Length=278, Percent_Identity=34.5323741007194, Blast_Score=137, Evalue=7e-34,
Organism=Escherichia coli, GI1787498, Length=273, Percent_Identity=30.03663003663, Blast_Score=123, Evalue=2e-29,
Organism=Escherichia coli, GI1787549, Length=280, Percent_Identity=27.8571428571429, Blast_Score=108, Evalue=3e-25,
Organism=Escherichia coli, GI1788505, Length=222, Percent_Identity=25.2252252252252, Blast_Score=85, Evalue=5e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31948; Mature: 31948

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
5.9 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIILKRLLQDKGAVIALGIIVLYVFLGLAAPLVTFYDPNHIDTANKFAGISFQHLLGTDH
CHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCHHHHHHCCCC
LGRDILTRLIYAIRPSLLYVFVALFVSVLIGSILGFLSGYFQGFVDALIMRACDVMLAFP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SYVVTLALIALFGMGAENIIMAFILTRWAWFCRVIRTSVMQYTASDHVRFAKTIGMNDMK
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
IIHKHIMPLTLADIAIISSSSMCSMILQISGFSFLGLGVKAPTAEWGMMLNEARKVMFTH
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHEECCCCCCCHHHHHHHHHHHHHHHCC
PEMMFAPGIAIVIIVMAFNFLSDALQIAIDPRISSKDKLRSVKKGVVQS
CHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCC
>Mature Secondary Structure
MIILKRLLQDKGAVIALGIIVLYVFLGLAAPLVTFYDPNHIDTANKFAGISFQHLLGTDH
CHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCHHHHHHCCCC
LGRDILTRLIYAIRPSLLYVFVALFVSVLIGSILGFLSGYFQGFVDALIMRACDVMLAFP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SYVVTLALIALFGMGAENIIMAFILTRWAWFCRVIRTSVMQYTASDHVRFAKTIGMNDMK
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
IIHKHIMPLTLADIAIISSSSMCSMILQISGFSFLGLGVKAPTAEWGMMLNEARKVMFTH
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHEECCCCCCCHHHHHHHHHHHHHHHCC
PEMMFAPGIAIVIIVMAFNFLSDALQIAIDPRISSKDKLRSVKKGVVQS
CHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9680333 [H]