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The map label for this gene is ecsB [H]

Identifier: 15924826

GI number: 15924826

Start: 1965997

End: 1967220

Strand: Reverse

Name: ecsB [H]

Synonym: SAV1836

Alternate gene names: 15924826

Gene position: 1967220-1965997 (Counterclockwise)

Preceding gene: 15924827

Following gene: 15924824

Centisome position: 68.34

GC content: 29.98

Gene sequence:

>1224_bases
ATGCATAACCAAGCGACCACATTATTTAATAAAAGATTACATGCCCTTCGTAAAGAGAAAAATTATTATAATAAGTTTAT
ATTTAATGGTCATTTCATGGTCTTTTTACTTATTTTGCTGGGTGCATTTATTTTTGGATATGGTGAATGGTTAAAACATA
TTCCAACGAATATCAATTTTGCATTAATAGCAGCAGTGATTGTTGCGTTGACATCCATTTTTCCAATGCGACCACTCCTA
AAAGAAGCGGATAAAATCTTTTTATTACCATTTGAAAAACACATGTCTCAATTTATGCGCCATGCGATTTTATATAGTTA
CTTTGCGCGCATATTAATCCAACTCATTATTGTTATTGTAATGTTCCCGTTGTTTTACAATATTAATCAACATAATGTGG
CATTTTATATTTGTTTTGGATTCAGTGCATTAATTTTTCCATATGTTGGTTTACGCTTAAGATGGCAATGGTATCAATCG
GGACTTAAAACATGGCAAGTTAATTTAATATCATTTATCATCTTTGCTCTAACATATTACTTACTATTAGCTCCAAAATG
GTACATCGTATTTGTGATGGTTGCTTTGCCTGTGTTAATAGAATTTTTAGTTAAAAAATATAAACCAGGCTTTTTGTATC
CTTGGGAGAAAATGATTGCTATCGAACATCGACATCATATGAATTATTATAAATTTGTTAATATGTTCACCGATGTAAAA
CATTTGAAAGAATCTGCAGTCAGAAGAAGTTATCTAGATATACTTTTACCAGTTCCAAAGGGTAGTAAATTTAACTCTAA
TGCGATGTATTTATTCTTATTTATTAGAAGCTTTATAAGAGGGAGAGACGCATTTAATATTATCTTTAGGTTAGTAATTA
TTGCAGTTTTACTTATGGTTTGGTTATCATATCCATTAGTGACAGGGGTTATTGGAAGTCTTTTTGTGTATATTATATTG
TTGCAAATGGCACAATTTTATTCACAACAAGCATATGGCTTATGGCCTCAAGTGTGGCCTGTACCTGAAGAGAAGGTAAT
CAAAGGGTATGAACAGTTTTTATATAGATTAATGTTTGTTATTTGTACTGTGTTTGCAGTGACATTTATTATAAAACATA
TGACGTTATTCTATGTTGTACTCATTTTCTATATTGTAGGTTTATTAACGATTAGAAGTATTATTAAAAAGTTGAAATAT
CAGGAAACATTATTACGAGACTAA

Upstream 100 bases:

>100_bases
GTTGCATTTGGAGATTTAGAAGCATTGAGACAACAAACTGGCTTACATAATCAAACATTAGACGATATATATATTCATGT
GACGCAAGGTGGAGATGTAC

Downstream 100 bases:

>100_bases
AAAACTTCCATTGGCATGTATGTTGTAAAGGTGCATGTAATGTTGAACGCCAAATGATACGGCGTTCAGATTACATTAGC
ATCTATACGTTAACAGCATA

Product: ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 407; Mature: 407

Protein sequence:

>407_residues
MHNQATTLFNKRLHALRKEKNYYNKFIFNGHFMVFLLILLGAFIFGYGEWLKHIPTNINFALIAAVIVALTSIFPMRPLL
KEADKIFLLPFEKHMSQFMRHAILYSYFARILIQLIIVIVMFPLFYNINQHNVAFYICFGFSALIFPYVGLRLRWQWYQS
GLKTWQVNLISFIIFALTYYLLLAPKWYIVFVMVALPVLIEFLVKKYKPGFLYPWEKMIAIEHRHHMNYYKFVNMFTDVK
HLKESAVRRSYLDILLPVPKGSKFNSNAMYLFLFIRSFIRGRDAFNIIFRLVIIAVLLMVWLSYPLVTGVIGSLFVYIIL
LQMAQFYSQQAYGLWPQVWPVPEEKVIKGYEQFLYRLMFVICTVFAVTFIIKHMTLFYVVLIFYIVGLLTIRSIIKKLKY
QETLLRD

Sequences:

>Translated_407_residues
MHNQATTLFNKRLHALRKEKNYYNKFIFNGHFMVFLLILLGAFIFGYGEWLKHIPTNINFALIAAVIVALTSIFPMRPLL
KEADKIFLLPFEKHMSQFMRHAILYSYFARILIQLIIVIVMFPLFYNINQHNVAFYICFGFSALIFPYVGLRLRWQWYQS
GLKTWQVNLISFIIFALTYYLLLAPKWYIVFVMVALPVLIEFLVKKYKPGFLYPWEKMIAIEHRHHMNYYKFVNMFTDVK
HLKESAVRRSYLDILLPVPKGSKFNSNAMYLFLFIRSFIRGRDAFNIIFRLVIIAVLLMVWLSYPLVTGVIGSLFVYIIL
LQMAQFYSQQAYGLWPQVWPVPEEKVIKGYEQFLYRLMFVICTVFAVTFIIKHMTLFYVVLIFYIVGLLTIRSIIKKLKY
QETLLRD
>Mature_407_residues
MHNQATTLFNKRLHALRKEKNYYNKFIFNGHFMVFLLILLGAFIFGYGEWLKHIPTNINFALIAAVIVALTSIFPMRPLL
KEADKIFLLPFEKHMSQFMRHAILYSYFARILIQLIIVIVMFPLFYNINQHNVAFYICFGFSALIFPYVGLRLRWQWYQS
GLKTWQVNLISFIIFALTYYLLLAPKWYIVFVMVALPVLIEFLVKKYKPGFLYPWEKMIAIEHRHHMNYYKFVNMFTDVK
HLKESAVRRSYLDILLPVPKGSKFNSNAMYLFLFIRSFIRGRDAFNIIFRLVIIAVLLMVWLSYPLVTGVIGSLFVYIIL
LQMAQFYSQQAYGLWPQVWPVPEEKVIKGYEQFLYRLMFVICTVFAVTFIIKHMTLFYVVLIFYIVGLLTIRSIIKKLKY
QETLLRD

Specific function: Presumed to form part of an ABC-transporter, it may form a transport channel [H]

COG id: COG4473

COG function: function code U; Predicted ABC-type exoprotein transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010288 [H]

Pfam domain/function: PF05975 EcsB [H]

EC number: NA

Molecular weight: Translated: 48451; Mature: 48451

Theoretical pI: Translated: 10.28; Mature: 10.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHNQATTLFNKRLHALRKEKNYYNKFIFNGHFMVFLLILLGAFIFGYGEWLKHIPTNINF
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
ALIAAVIVALTSIFPMRPLLKEADKIFLLPFEKHMSQFMRHAILYSYFARILIQLIIVIV
HHHHHHHHHHHHHHCCCHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MFPLFYNINQHNVAFYICFGFSALIFPYVGLRLRWQWYQSGLKTWQVNLISFIIFALTYY
HHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
LLLAPKWYIVFVMVALPVLIEFLVKKYKPGFLYPWEKMIAIEHRHHMNYYKFVNMFTDVK
HHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
HLKESAVRRSYLDILLPVPKGSKFNSNAMYLFLFIRSFIRGRDAFNIIFRLVIIAVLLMV
HHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
WLSYPLVTGVIGSLFVYIILLQMAQFYSQQAYGLWPQVWPVPEEKVIKGYEQFLYRLMFV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
ICTVFAVTFIIKHMTLFYVVLIFYIVGLLTIRSIIKKLKYQETLLRD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8581172; 9579061; 9384377 [H]