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The map label for this gene is sen [H]

Identifier: 15924815

GI number: 15924815

Start: 1955162

End: 1955938

Strand: Reverse

Name: sen [H]

Synonym: SAV1825

Alternate gene names: 15924815

Gene position: 1955938-1955162 (Counterclockwise)

Preceding gene: 15924816

Following gene: 15924814

Centisome position: 67.95

GC content: 24.84

Gene sequence:

>777_bases
ATAAAAAATATTAAAAAGCTTATGAGATTGTTCTACATAGCTGCAATTATAATAACTTTATTATGTCTTATTAATAATAA
TTATGTTAATGCTGAAGTAGACAAAAAAGATTTAAAGAAAAAATCTGATCTAGATAGTAGTAAGTTATTTAATTTAACAA
GCTATTATACTGATATAACGTGGCAATTAGACGAGTCAAATAAAATTAGTACAGATCAACTACTGAATAATACTATAATA
TTAAAAAATATTGATATATCCGTACTTAAAACTTCTAGTTTGAAAGTTGAGTTTAACTCATCAGATTTAGCAAATCAATT
TAAAGGAAAAAATATAGATATTTATGGACTGTATTTTGGAAATAAATGTGTAGGCTTAACTGAAGAAAAAACATCATGCT
TATACGGAGGAGTTACGATACATGATGGAAATCAATTAGATGAAGAGAAAGTTATAGGCGTTAATGTATTTAAAGATGGT
GTCCAACAAGAAGGTTTTGTTATAAAAACCAAAAAGGCTAAAGTAACAGTACAAGAATTAGACACTAAAGTTCGATTTAA
ATTAGAAAATTTATATAAAATATACAATAAAGATACCGGTAACATACAAAAAGGATGCATTTTCTTTCATTCTCATAATC
ATCAAGATCAATCATTTTATTATGATTTATATAACGTAAAAGGTTCAGTGGGAGCAGAGTTTTTTCAATTTTATAGTGAT
AATAGAACAGTTAGCTCATCTAATTATCATATTGATGTATTTTTATATAAAGATTAA

Upstream 100 bases:

>100_bases
CTAAATATTTACTAATTTATAATGATAATAAAACAGTTGAGAGTAAATCTATTAATGTAGAAGTTCATTTAACCAAAAAA
TAATTGAGGGAGAGAATATT

Downstream 100 bases:

>100_bases
GTGATTGATGATTATCAACTGAATCATGAAATTAAACCATTTTATGAGAGGAAAATGATTTGAATTGTAGTAAAATTTGA
AATTTATATATTATCTTGAA

Product: enterotoxin

Products: NA

Alternate protein names: SEA [H]

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MKNIKKLMRLFYIAAIIITLLCLINNNYVNAEVDKKDLKKKSDLDSSKLFNLTSYYTDITWQLDESNKISTDQLLNNTII
LKNIDISVLKTSSLKVEFNSSDLANQFKGKNIDIYGLYFGNKCVGLTEEKTSCLYGGVTIHDGNQLDEEKVIGVNVFKDG
VQQEGFVIKTKKAKVTVQELDTKVRFKLENLYKIYNKDTGNIQKGCIFFHSHNHQDQSFYYDLYNVKGSVGAEFFQFYSD
NRTVSSSNYHIDVFLYKD

Sequences:

>Translated_258_residues
MKNIKKLMRLFYIAAIIITLLCLINNNYVNAEVDKKDLKKKSDLDSSKLFNLTSYYTDITWQLDESNKISTDQLLNNTII
LKNIDISVLKTSSLKVEFNSSDLANQFKGKNIDIYGLYFGNKCVGLTEEKTSCLYGGVTIHDGNQLDEEKVIGVNVFKDG
VQQEGFVIKTKKAKVTVQELDTKVRFKLENLYKIYNKDTGNIQKGCIFFHSHNHQDQSFYYDLYNVKGSVGAEFFQFYSD
NRTVSSSNYHIDVFLYKD
>Mature_258_residues
MKNIKKLMRLFYIAAIIITLLCLINNNYVNAEVDKKDLKKKSDLDSSKLFNLTSYYTDITWQLDESNKISTDQLLNNTII
LKNIDISVLKTSSLKVEFNSSDLANQFKGKNIDIYGLYFGNKCVGLTEEKTSCLYGGVTIHDGNQLDEEKVIGVNVFKDG
VQQEGFVIKTKKAKVTVQELDTKVRFKLENLYKIYNKDTGNIQKGCIFFHSHNHQDQSFYYDLYNVKGSVGAEFFQFYSD
NRTVSSSNYHIDVFLYKD

Specific function: Staphylococcal enterotoxins cause the intoxication staphylococcal food poisoning syndrome. The illness is characterized by high fever, hypotension, diarrhea, shock, and in some cases death [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the staphylococcal/streptococcal toxin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008992
- InterPro:   IPR006126
- InterPro:   IPR006173
- InterPro:   IPR016091
- InterPro:   IPR013307
- InterPro:   IPR006123
- InterPro:   IPR006177 [H]

Pfam domain/function: PF02876 Stap_Strp_tox_C; PF01123 Stap_Strp_toxin [H]

EC number: NA

Molecular weight: Translated: 29676; Mature: 29676

Theoretical pI: Translated: 8.26; Mature: 8.26

Prosite motif: PS00277 STAPH_STREP_TOXIN_1 ; PS00278 STAPH_STREP_TOXIN_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNIKKLMRLFYIAAIIITLLCLINNNYVNAEVDKKDLKKKSDLDSSKLFNLTSYYTDIT
CCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHCCCCHHHHEEEEHEEEEEE
WQLDESNKISTDQLLNNTIILKNIDISVLKTSSLKVEFNSSDLANQFKGKNIDIYGLYFG
EEECCCCCCCHHHHHCCEEEEEECCEEEEEECEEEEEECCCHHHHHHCCCCEEEEEEEEC
NKCVGLTEEKTSCLYGGVTIHDGNQLDEEKVIGVNVFKDGVQQEGFVIKTKKAKVTVQEL
CEEECCCCCCCCEEECCEEEECCCCCCCCEEEEEEHHHCCCCCCCEEEEECCCEEEHHHH
DTKVRFKLENLYKIYNKDTGNIQKGCIFFHSHNHQDQSFYYDLYNVKGSVGAEFFQFYSD
CCCEEEEHHHHHHHHCCCCCCCEEEEEEEECCCCCCCEEEEEEEECCCCHHHHHHHHHCC
NRTVSSSNYHIDVFLYKD
CCEEECCCEEEEEEEECC
>Mature Secondary Structure
MKNIKKLMRLFYIAAIIITLLCLINNNYVNAEVDKKDLKKKSDLDSSKLFNLTSYYTDIT
CCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHCCCCHHHHEEEEHEEEEEE
WQLDESNKISTDQLLNNTIILKNIDISVLKTSSLKVEFNSSDLANQFKGKNIDIYGLYFG
EEECCCCCCCHHHHHCCEEEEEECCEEEEEECEEEEEECCCHHHHHHCCCCEEEEEEEEC
NKCVGLTEEKTSCLYGGVTIHDGNQLDEEKVIGVNVFKDGVQQEGFVIKTKKAKVTVQEL
CEEECCCCCCCCEEECCEEEECCCCCCCCEEEEEEHHHCCCCCCCEEEEECCCEEEHHHH
DTKVRFKLENLYKIYNKDTGNIQKGCIFFHSHNHQDQSFYYDLYNVKGSVGAEFFQFYSD
CCCEEEEHHHHHHHHCCCCCCCEEEEEEEECCCCCCCEEEEEEEECCCCHHHHHHHHHCC
NRTVSSSNYHIDVFLYKD
CCEEECCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3335483; 3584106; 7628431; 8943278; 7552730; 9191070 [H]