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The map label for this gene is ytsJ [H]

Identifier: 15924692

GI number: 15924692

Start: 1817182

End: 1818411

Strand: Reverse

Name: ytsJ [H]

Synonym: SAV1702

Alternate gene names: 15924692

Gene position: 1818411-1817182 (Counterclockwise)

Preceding gene: 15924693

Following gene: 15924691

Centisome position: 63.17

GC content: 35.77

Gene sequence:

>1230_bases
ATGTCATTAAGAGATGAAGCATTGGAAATGCACAAACGTAATCAAGGTAAATTAGAAGTTAAACCAAATGTAAAAGTTAC
TAATAAAGAGGAATTAAGTTTAGCATACTCACCTGGCGTTGCTGAACCGTGTAAAGATATTTATGAAGATAAAAGAAAAG
TATATGATTACACAATTAAAGGAAATACAGTTGCAGTTATTACTGATGGAACAGCGGTATTAGGTTTAGGTAACATTGGA
CCTGAAGCAAGTATTCCTGTAATGGAAGGTAAAGCAGTATTATTCAAAAGCTTCGCTGGTATCAATGGGGTGCCTATTGC
GTTAAATACAACTGATACCGAAGAAATCATTAAAACAGTTAAGTTGTTAGAACCTAATTATGGTGGTATTAATTTAGAGG
ATATTTCGGCACCACGTTGTTTTGAAATTGAAGAACGATTGAAAAAAGAAACTAATATTCCGGTATTCCATGACGATCAA
CATGGTACAGCAATTGTAACAATGGCAGGTTTGGTAAATGCATTGAGAGTTGTTAACAAAGATATTGCTAAAATAAAAGT
TGTACTAAATGGTGCTGGTGCAGCAGGAATAGCCATTGTTAAATTACTATACGCGTATGGTGTAAGAAATATGGTTATGT
GTGACTCAAGAGGCGCAATTTTTGAAGGACGTTCATATGGTATGAATCCTACGAAAGATGTTGTAGCTAAATGGACAAAT
AAAGATAAGATTGAAGGGTCTTTAGAAGAAGTCGTAAAAGACGCAGATGTATTTATCGGAGTTTCTGTAGCTAATGCGCT
GTCACAAGATATGGTTAAGAGTATGGCAGATAATCCAATTATATTTGCAATGGCTAATCCAAATCCTGAAATAATACCTG
ATGATGCCAAAGCGGCAGGTGCACGAGTTGTTGGTACAGGACGTTCAGACTATCCTAACCAAATTAATAATGTATTAGCT
TTCCCTGGTATTTTTAGAGGTGCATTAGAGGTTGAAGCTACACATATAAATGAAGAAATGAAAAAGGCAGCTGTAGAAGC
GATTGCTGATTTAATCGATAGTTCTGAATTAAATGAAGACTACTGTATCCCAGGACCGTTTGATAAACGTGTAGCGCCAT
CAGTTGCTCGTAATGTTGCTAAAGCGGCAATGGAATCTGGAGTAGCTAGGATTGAAGTTGATCCGCAAGATGTGTATGAT
AAAACAATGAAACTTACAGATTTACAATAA

Upstream 100 bases:

>100_bases
CTTACTCATTCAGATTTACCCAATATTTTTACTTTTATAATGTAATGCGTTTTATCCAAGTTATTTTTTAAAAATAAATA
TTGAATTAGGGGCTGATTTC

Downstream 100 bases:

>100_bases
AAATAATTAACGTTTAATTAAATTGCTTAAAAGTTAGCAATAAAGAGTCATTAAAATGATGAAAATGAAAGTTTATGATA
AACATTCAACAGTCAAACGA

Product: malate dehydrogenase-like protein

Products: NA

Alternate protein names: NAD-ME 4 [H]

Number of amino acids: Translated: 409; Mature: 408

Protein sequence:

>409_residues
MSLRDEALEMHKRNQGKLEVKPNVKVTNKEELSLAYSPGVAEPCKDIYEDKRKVYDYTIKGNTVAVITDGTAVLGLGNIG
PEASIPVMEGKAVLFKSFAGINGVPIALNTTDTEEIIKTVKLLEPNYGGINLEDISAPRCFEIEERLKKETNIPVFHDDQ
HGTAIVTMAGLVNALRVVNKDIAKIKVVLNGAGAAGIAIVKLLYAYGVRNMVMCDSRGAIFEGRSYGMNPTKDVVAKWTN
KDKIEGSLEEVVKDADVFIGVSVANALSQDMVKSMADNPIIFAMANPNPEIIPDDAKAAGARVVGTGRSDYPNQINNVLA
FPGIFRGALEVEATHINEEMKKAAVEAIADLIDSSELNEDYCIPGPFDKRVAPSVARNVAKAAMESGVARIEVDPQDVYD
KTMKLTDLQ

Sequences:

>Translated_409_residues
MSLRDEALEMHKRNQGKLEVKPNVKVTNKEELSLAYSPGVAEPCKDIYEDKRKVYDYTIKGNTVAVITDGTAVLGLGNIG
PEASIPVMEGKAVLFKSFAGINGVPIALNTTDTEEIIKTVKLLEPNYGGINLEDISAPRCFEIEERLKKETNIPVFHDDQ
HGTAIVTMAGLVNALRVVNKDIAKIKVVLNGAGAAGIAIVKLLYAYGVRNMVMCDSRGAIFEGRSYGMNPTKDVVAKWTN
KDKIEGSLEEVVKDADVFIGVSVANALSQDMVKSMADNPIIFAMANPNPEIIPDDAKAAGARVVGTGRSDYPNQINNVLA
FPGIFRGALEVEATHINEEMKKAAVEAIADLIDSSELNEDYCIPGPFDKRVAPSVARNVAKAAMESGVARIEVDPQDVYD
KTMKLTDLQ
>Mature_408_residues
SLRDEALEMHKRNQGKLEVKPNVKVTNKEELSLAYSPGVAEPCKDIYEDKRKVYDYTIKGNTVAVITDGTAVLGLGNIGP
EASIPVMEGKAVLFKSFAGINGVPIALNTTDTEEIIKTVKLLEPNYGGINLEDISAPRCFEIEERLKKETNIPVFHDDQH
GTAIVTMAGLVNALRVVNKDIAKIKVVLNGAGAAGIAIVKLLYAYGVRNMVMCDSRGAIFEGRSYGMNPTKDVVAKWTNK
DKIEGSLEEVVKDADVFIGVSVANALSQDMVKSMADNPIIFAMANPNPEIIPDDAKAAGARVVGTGRSDYPNQINNVLAF
PGIFRGALEVEATHINEEMKKAAVEAIADLIDSSELNEDYCIPGPFDKRVAPSVARNVAKAAMESGVARIEVDPQDVYDK
TMKLTDLQ

Specific function: Unknown

COG id: COG0281

COG function: function code C; Malic enzyme

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the malic enzymes family [H]

Homologues:

Organism=Homo sapiens, GI62420882, Length=402, Percent_Identity=27.8606965174129, Blast_Score=107, Evalue=2e-23,
Organism=Homo sapiens, GI62420880, Length=402, Percent_Identity=27.8606965174129, Blast_Score=107, Evalue=2e-23,
Organism=Homo sapiens, GI239049447, Length=402, Percent_Identity=27.8606965174129, Blast_Score=107, Evalue=2e-23,
Organism=Homo sapiens, GI4505143, Length=394, Percent_Identity=25.3807106598985, Blast_Score=104, Evalue=1e-22,
Organism=Homo sapiens, GI4505145, Length=361, Percent_Identity=26.3157894736842, Blast_Score=78, Evalue=2e-14,
Organism=Homo sapiens, GI270265879, Length=320, Percent_Identity=27.5, Blast_Score=68, Evalue=1e-11,
Organism=Escherichia coli, GI1788806, Length=416, Percent_Identity=50.9615384615385, Blast_Score=397, Evalue=1e-112,
Organism=Escherichia coli, GI87081919, Length=445, Percent_Identity=26.2921348314607, Blast_Score=90, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI17537199, Length=415, Percent_Identity=27.710843373494, Blast_Score=90, Evalue=2e-18,
Organism=Saccharomyces cerevisiae, GI6322823, Length=315, Percent_Identity=31.7460317460317, Blast_Score=110, Evalue=4e-25,
Organism=Drosophila melanogaster, GI281362674, Length=445, Percent_Identity=26.7415730337079, Blast_Score=101, Evalue=1e-21,
Organism=Drosophila melanogaster, GI21356279, Length=445, Percent_Identity=26.7415730337079, Blast_Score=101, Evalue=1e-21,
Organism=Drosophila melanogaster, GI281362672, Length=445, Percent_Identity=26.7415730337079, Blast_Score=100, Evalue=1e-21,
Organism=Drosophila melanogaster, GI24646386, Length=443, Percent_Identity=27.5395033860045, Blast_Score=99, Evalue=5e-21,
Organism=Drosophila melanogaster, GI24646388, Length=443, Percent_Identity=27.313769751693, Blast_Score=99, Evalue=6e-21,
Organism=Drosophila melanogaster, GI78707242, Length=397, Percent_Identity=24.9370277078086, Blast_Score=90, Evalue=2e-18,
Organism=Drosophila melanogaster, GI78707238, Length=397, Percent_Identity=24.9370277078086, Blast_Score=90, Evalue=2e-18,
Organism=Drosophila melanogaster, GI78707240, Length=386, Percent_Identity=24.6113989637306, Blast_Score=80, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015884
- InterPro:   IPR012301
- InterPro:   IPR012302
- InterPro:   IPR001891
- InterPro:   IPR016040 [H]

Pfam domain/function: PF00390 malic; PF03949 Malic_M [H]

EC number: =1.1.1.38 [H]

Molecular weight: Translated: 44252; Mature: 44121

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: PS00331 MALIC_ENZYMES

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLRDEALEMHKRNQGKLEVKPNVKVTNKEELSLAYSPGVAEPCKDIYEDKRKVYDYTIK
CCCHHHHHHHHHCCCCCEEECCCEEECCHHHEEEEECCCCCHHHHHHHHHHHEEEEEEEC
GNTVAVITDGTAVLGLGNIGPEASIPVMEGKAVLFKSFAGINGVPIALNTTDTEEIIKTV
CCEEEEEECCCEEEEECCCCCCCCCEEECCCHHHHHHHCCCCCEEEEEECCCHHHHHHHH
KLLEPNYGGINLEDISAPRCFEIEERLKKETNIPVFHDDQHGTAIVTMAGLVNALRVVNK
HHHCCCCCCCCHHCCCCCCCCHHHHHHHHHCCCCEEECCCCCEEEEHHHHHHHHHHHHCC
DIAKIKVVLNGAGAAGIAIVKLLYAYGVRNMVMCDSRGAIFEGRSYGMNPTKDVVAKWTN
CCEEEEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCCCEECCCCCCCCCHHHHHHHCCC
KDKIEGSLEEVVKDADVFIGVSVANALSQDMVKSMADNPIIFAMANPNPEIIPDDAKAAG
CHHCCCHHHHHHHHHHEEEEHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCC
ARVVGTGRSDYPNQINNVLAFPGIFRGALEVEATHINEEMKKAAVEAIADLIDSSELNED
CEEEECCCCCCCHHHHHHECCCHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCC
YCIPGPFDKRVAPSVARNVAKAAMESGVARIEVDPQDVYDKTMKLTDLQ
CCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SLRDEALEMHKRNQGKLEVKPNVKVTNKEELSLAYSPGVAEPCKDIYEDKRKVYDYTIK
CCHHHHHHHHHCCCCCEEECCCEEECCHHHEEEEECCCCCHHHHHHHHHHHEEEEEEEC
GNTVAVITDGTAVLGLGNIGPEASIPVMEGKAVLFKSFAGINGVPIALNTTDTEEIIKTV
CCEEEEEECCCEEEEECCCCCCCCCEEECCCHHHHHHHCCCCCEEEEEECCCHHHHHHHH
KLLEPNYGGINLEDISAPRCFEIEERLKKETNIPVFHDDQHGTAIVTMAGLVNALRVVNK
HHHCCCCCCCCHHCCCCCCCCHHHHHHHHHCCCCEEECCCCCEEEEHHHHHHHHHHHHCC
DIAKIKVVLNGAGAAGIAIVKLLYAYGVRNMVMCDSRGAIFEGRSYGMNPTKDVVAKWTN
CCEEEEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCCCEECCCCCCCCCHHHHHHHCCC
KDKIEGSLEEVVKDADVFIGVSVANALSQDMVKSMADNPIIFAMANPNPEIIPDDAKAAG
CHHCCCHHHHHHHHHHEEEEHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCC
ARVVGTGRSDYPNQINNVLAFPGIFRGALEVEATHINEEMKKAAVEAIADLIDSSELNED
CEEEECCCCCCCHHHHHHECCCHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCC
YCIPGPFDKRVAPSVARNVAKAAMESGVARIEVDPQDVYDKTMKLTDLQ
CCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]