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The map label for this gene is nrdR [H]

Identifier: 15924676

GI number: 15924676

Start: 1795087

End: 1795557

Strand: Reverse

Name: nrdR [H]

Synonym: SAV1686

Alternate gene names: 15924676

Gene position: 1795557-1795087 (Counterclockwise)

Preceding gene: 15924677

Following gene: 15924675

Centisome position: 62.38

GC content: 35.46

Gene sequence:

>471_bases
ATGAAATGCCCGAAATGTAATTCTACACAATCTAAAGTTGTAGATTCAAGGCATGCCGATGAATTAAATGCCATTCGAAG
ACGAAGAGAATGTGAAAATTGTGGAACACGTTTCACTACATTTGAACATATCGAAGTTAGTCAGCTTATAGTTGTGAAAA
AAGATGGCACAAGAGAGCAGTTTTCAAGAGAAAAAATACTTAATGGACTTGTGCGTTCTTGTGAGAAACGACCAGTTAGA
TATCAACAACTTGAAGACATAACAAACAAGGTTGAATGGCAATTACGAGATGAAGGTCATACGGAAGTGTCTTCACGAGA
TATAGGTGAACACGTTATGAACTTGTTAATGCATGTTGATCAAGTTTCATATGTTAGATTTGCATCAGTCTATAAAGAAT
TTAAAGATGTTGATCAATTGTTAGCATCGATGCAAGGGATTTTAAGCGAAAACAAACGGAGTGATGCTTAA

Upstream 100 bases:

>100_bases
TGTTTCATTATTTGGTTAAATGAATTAAATTGAGGGATTCTTTTTTCATCTCTAGATTTATAGTATAATTAGGCATAATC
AAAATAAAGAGGGTGATGTA

Downstream 100 bases:

>100_bases
ATGGGACGACAAGCCTTCGAATTCGGCTTAAGACCAAAGGATCAATTCAAAGTTATGCAACACTTTGATTTAAATACGAA
TCATTTAGAGGTATTGAATC

Product: transcriptional regulator NrdR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MKCPKCNSTQSKVVDSRHADELNAIRRRRECENCGTRFTTFEHIEVSQLIVVKKDGTREQFSREKILNGLVRSCEKRPVR
YQQLEDITNKVEWQLRDEGHTEVSSRDIGEHVMNLLMHVDQVSYVRFASVYKEFKDVDQLLASMQGILSENKRSDA

Sequences:

>Translated_156_residues
MKCPKCNSTQSKVVDSRHADELNAIRRRRECENCGTRFTTFEHIEVSQLIVVKKDGTREQFSREKILNGLVRSCEKRPVR
YQQLEDITNKVEWQLRDEGHTEVSSRDIGEHVMNLLMHVDQVSYVRFASVYKEFKDVDQLLASMQGILSENKRSDA
>Mature_156_residues
MKCPKCNSTQSKVVDSRHADELNAIRRRRECENCGTRFTTFEHIEVSQLIVVKKDGTREQFSREKILNGLVRSCEKRPVR
YQQLEDITNKVEWQLRDEGHTEVSSRDIGEHVMNLLMHVDQVSYVRFASVYKEFKDVDQLLASMQGILSENKRSDA

Specific function: Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes [H]

COG id: COG1327

COG function: function code K; Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ATP-cone domain [H]

Homologues:

Organism=Escherichia coli, GI1786615, Length=140, Percent_Identity=45, Blast_Score=127, Evalue=4e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005144
- InterPro:   IPR003796 [H]

Pfam domain/function: PF03477 ATP-cone [H]

EC number: NA

Molecular weight: Translated: 18204; Mature: 18204

Theoretical pI: Translated: 7.90; Mature: 7.90

Prosite motif: PS51161 ATP_CONE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKCPKCNSTQSKVVDSRHADELNAIRRRRECENCGTRFTTFEHIEVSQLIVVKKDGTREQ
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHEEEECCCCCHHH
FSREKILNGLVRSCEKRPVRYQQLEDITNKVEWQLRDEGHTEVSSRDIGEHVMNLLMHVD
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
QVSYVRFASVYKEFKDVDQLLASMQGILSENKRSDA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKCPKCNSTQSKVVDSRHADELNAIRRRRECENCGTRFTTFEHIEVSQLIVVKKDGTREQ
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHEEEECCCCCHHH
FSREKILNGLVRSCEKRPVRYQQLEDITNKVEWQLRDEGHTEVSSRDIGEHVMNLLMHVD
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
QVSYVRFASVYKEFKDVDQLLASMQGILSENKRSDA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA