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The map label for this gene is tnp [H]

Identifier: 15923405

GI number: 15923405

Start: 460233

End: 461423

Strand: Reverse

Name: tnp [H]

Synonym: SAV0415

Alternate gene names: 15923405

Gene position: 461423-460233 (Counterclockwise)

Preceding gene: 15923406

Following gene: 15923404

Centisome position: 16.03

GC content: 43.16

Gene sequence:

>1191_bases
ATGAACGATTTTACTACAGAAATTCTAAAGACTCTAGCGAACAAAGGCGATTTGAATGAATTATTCCGTGTCCATTTGGA
GAAAGCAGTCAATACGCTTCTCAAAACGGAGTTAACGGCTTTCCTAGATTACGAAAAGTATGATCGCATTGGTTTTAACA
CGGGTAATTCTCGTAACGGCTCCTATGACCGTACGGTCAAGACCGAGTATGGGGAACTTCATCTCCAGATTCCGCGCGAC
CGCAATGGTGAGTTCAAGCAACAGACTGTTCCTGCTTATAGACGGACGAATGACACGTTAGAGGAGACCGTCATTCACCT
CTTCCGAAAAGGTATTACCATGTCGGAAATCGCAGACTTGATTGAGAAAATGTATGGGCATTACTACACGCCCCAAACCA
TGTCCAATATAACAAAATCATTTACAGAAGAGGTAACGGCGTTTAATGGGCGGGAGCTTCATGACCGTTATGCTGCTATT
TATATGGACGCAACGTATATTCCGTTAAAGCGGAAAACCGTCGCCAAGGAAGCTATTCATATCGCAGTTGGCATTCGCCC
GGACGGATCAAAGGAAGTATTGAGCTATGCGATTGCACCGACTGAATCCATCACGATTTGGGAGGAAATTTTATTGGACC
TTCAAGAGCGCGGTTTGAAAAATGTCCTCCTGTTCATCACGGATGGCTTAAAGGGGATGGTAGGAGCGATTAGTCGGTTC
TATCCCAAAGCTCGTTTTCAACATTGTTGTGTACACGTTTCCCGTAATATCAGTCATAAAGTGCGTGTCGATGATCGTAA
GGAAGTCTGTGATGATTTTAAAATGGTGTATCAAGCCTCATCTAAAGAGGTGGCGTTGGAAGCACGTGGTACTTTTGCGG
AAAAATGGAAAACCAGCTATCCAAAAGTGGTTGAATCGATTCTTTCGAACGATCACTTGCTCACTTTCTATGATTTCCCC
TTGGCCATACGCAAGAGTATTTATTCTACGAACTTGATTGAATCCTTTAATAAACAAATCAAGAAATACAGCCACCGCAA
GGAACAGTTCCAAAATGAAGAGTCGATGGAACGTTTCTTAGTCTCGTCTTTTGATACTTACAACCAAAAATTCCTAGGTC
GCAGTCATAAAGGTTTCCAACAGGCCGAAGGCGAGCTCGAACAAATGCTAAGCCAACTGATTGAGAATTAG

Upstream 100 bases:

>100_bases
ATAATGGAGAGTGTAAAATATTTTGTGTAAATAGAAAAAAGGAAGTCCCTTCTGTAGAATAGAGTTACCACAACACATTC
ACAGAAGAGAGGACTTCCCT

Downstream 100 bases:

>100_bases
AAACAATCTGCAGTAGGGAAGAATCATTTACACAAAATTATTGACGCTCCCTTATAATGAGAACTTTTACTAACATAATT
TATGATAAACTTACTATATA

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 396; Mature: 396

Protein sequence:

>396_residues
MNDFTTEILKTLANKGDLNELFRVHLEKAVNTLLKTELTAFLDYEKYDRIGFNTGNSRNGSYDRTVKTEYGELHLQIPRD
RNGEFKQQTVPAYRRTNDTLEETVIHLFRKGITMSEIADLIEKMYGHYYTPQTMSNITKSFTEEVTAFNGRELHDRYAAI
YMDATYIPLKRKTVAKEAIHIAVGIRPDGSKEVLSYAIAPTESITIWEEILLDLQERGLKNVLLFITDGLKGMVGAISRF
YPKARFQHCCVHVSRNISHKVRVDDRKEVCDDFKMVYQASSKEVALEARGTFAEKWKTSYPKVVESILSNDHLLTFYDFP
LAIRKSIYSTNLIESFNKQIKKYSHRKEQFQNEESMERFLVSSFDTYNQKFLGRSHKGFQQAEGELEQMLSQLIEN

Sequences:

>Translated_396_residues
MNDFTTEILKTLANKGDLNELFRVHLEKAVNTLLKTELTAFLDYEKYDRIGFNTGNSRNGSYDRTVKTEYGELHLQIPRD
RNGEFKQQTVPAYRRTNDTLEETVIHLFRKGITMSEIADLIEKMYGHYYTPQTMSNITKSFTEEVTAFNGRELHDRYAAI
YMDATYIPLKRKTVAKEAIHIAVGIRPDGSKEVLSYAIAPTESITIWEEILLDLQERGLKNVLLFITDGLKGMVGAISRF
YPKARFQHCCVHVSRNISHKVRVDDRKEVCDDFKMVYQASSKEVALEARGTFAEKWKTSYPKVVESILSNDHLLTFYDFP
LAIRKSIYSTNLIESFNKQIKKYSHRKEQFQNEESMERFLVSSFDTYNQKFLGRSHKGFQQAEGELEQMLSQLIEN
>Mature_396_residues
MNDFTTEILKTLANKGDLNELFRVHLEKAVNTLLKTELTAFLDYEKYDRIGFNTGNSRNGSYDRTVKTEYGELHLQIPRD
RNGEFKQQTVPAYRRTNDTLEETVIHLFRKGITMSEIADLIEKMYGHYYTPQTMSNITKSFTEEVTAFNGRELHDRYAAI
YMDATYIPLKRKTVAKEAIHIAVGIRPDGSKEVLSYAIAPTESITIWEEILLDLQERGLKNVLLFITDGLKGMVGAISRF
YPKARFQHCCVHVSRNISHKVRVDDRKEVCDDFKMVYQASSKEVALEARGTFAEKWKTSYPKVVESILSNDHLLTFYDFP
LAIRKSIYSTNLIESFNKQIKKYSHRKEQFQNEESMERFLVSSFDTYNQKFLGRSHKGFQQAEGELEQMLSQLIEN

Specific function: Required for the transposition of the insertion element [H]

COG id: COG3328

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase mutator family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001207 [H]

Pfam domain/function: PF00872 Transposase_mut [H]

EC number: NA

Molecular weight: Translated: 45966; Mature: 45966

Theoretical pI: Translated: 7.74; Mature: 7.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDFTTEILKTLANKGDLNELFRVHLEKAVNTLLKTELTAFLDYEKYDRIGFNTGNSRNG
CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
SYDRTVKTEYGELHLQIPRDRNGEFKQQTVPAYRRTNDTLEETVIHLFRKGITMSEIADL
CCCCCEECCCCEEEEECCCCCCCCCHHHHCCHHHHCCHHHHHHHHHHHHHCCCHHHHHHH
IEKMYGHYYTPQTMSNITKSFTEEVTAFNGRELHDRYAAIYMDATYIPLKRKTVAKEAIH
HHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHEEEECCEECCHHHHHHHHHHEE
IAVGIRPDGSKEVLSYAIAPTESITIWEEILLDLQERGLKNVLLFITDGLKGMVGAISRF
EEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHEEHHHHCCHHHHHHHHHHH
YPKARFQHCCVHVSRNISHKVRVDDRKEVCDDFKMVYQASSKEVALEARGTFAEKWKTSY
HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHCCCH
PKVVESILSNDHLLTFYDFPLAIRKSIYSTNLIESFNKQIKKYSHRKEQFQNEESMERFL
HHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
VSSFDTYNQKFLGRSHKGFQQAEGELEQMLSQLIEN
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNDFTTEILKTLANKGDLNELFRVHLEKAVNTLLKTELTAFLDYEKYDRIGFNTGNSRNG
CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
SYDRTVKTEYGELHLQIPRDRNGEFKQQTVPAYRRTNDTLEETVIHLFRKGITMSEIADL
CCCCCEECCCCEEEEECCCCCCCCCHHHHCCHHHHCCHHHHHHHHHHHHHCCCHHHHHHH
IEKMYGHYYTPQTMSNITKSFTEEVTAFNGRELHDRYAAIYMDATYIPLKRKTVAKEAIH
HHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHEEEECCEECCHHHHHHHHHHEE
IAVGIRPDGSKEVLSYAIAPTESITIWEEILLDLQERGLKNVLLFITDGLKGMVGAISRF
EEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHEEHHHHCCHHHHHHHHHHH
YPKARFQHCCVHVSRNISHKVRVDDRKEVCDDFKMVYQASSKEVALEARGTFAEKWKTSY
HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHCCCH
PKVVESILSNDHLLTFYDFPLAIRKSIYSTNLIESFNKQIKKYSHRKEQFQNEESMERFL
HHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
VSSFDTYNQKFLGRSHKGFQQAEGELEQMLSQLIEN
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8195098; 11337471 [H]